RNA–Protein interactions for RNA: ENST00000367427.7

CFHR3-202, Transcript of complement factor H related 3, humanhuman

TSL 5

Gene CFHR3, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-202ENST00000367427 EMILIN1Q9Y6C2 1016 aa13.45□□□□□ -0.26
CFHR3-202ENST00000367427 CCDC116Q8IYX3 515 aa13.44□□□□□ -0.26
CFHR3-202ENST00000367427 ERFEQ4G0M1 354 aa13.43□□□□□ -0.26
CFHR3-202ENST00000367427 MAGEB6P1A0A0J9YX57 407 aa13.42□□□□□ -0.26
CFHR3-202ENST00000367427 HOMEZQ8IX15 550 aa13.42□□□□□ -0.26
CFHR3-202ENST00000367427 CTDSPL2Q05D32 466 aa13.41□□□□□ -0.26
CFHR3-202ENST00000367427 Q6ZVU0 165 aa13.4□□□□□ -0.26
CFHR3-202ENST00000367427 GPR161Q8N6U8 529 aaKnown RBP13.4□□□□□ -0.26
CFHR3-202ENST00000367427 PDXDC2PQ6P474 469 aa13.39□□□□□ -0.27
CFHR3-202ENST00000367427 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
CFHR3-202ENST00000367427 POLR3EQ9NVU0 708 aa13.39□□□□□ -0.27
CFHR3-202ENST00000367427 GSK3AP49840 483 aa13.38□□□□□ -0.27
CFHR3-202ENST00000367427 KRT76Q01546 638 aa13.38□□□□□ -0.27
CFHR3-202ENST00000367427 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.38□□□□□ -0.27
CFHR3-202ENST00000367427 PPP1R26Q5T8A7 1209 aaPredicted RBP13.38□□□□□ -0.27
CFHR3-202ENST00000367427 CARD14Q9BXL6 1004 aa13.38□□□□□ -0.27
CFHR3-202ENST00000367427 TTLL8A6PVC2 850 aa13.37□□□□□ -0.27
CFHR3-202ENST00000367427 FBXO31Q5XUX0 539 aaPredicted RBP13.37□□□□□ -0.27
CFHR3-202ENST00000367427 CBLBQ13191 982 aa13.36□□□□□ -0.27
CFHR3-202ENST00000367427 SPINT1O43278 529 aa13.35□□□□□ -0.27
CFHR3-202ENST00000367427 PTSQ03393 145 aa13.35□□□□□ -0.27
CFHR3-202ENST00000367427 KCNMA1Q12791 1236 aa13.34□□□□□ -0.27
CFHR3-202ENST00000367427 LRRN4Q8WUT4 740 aa13.34□□□□□ -0.27
CFHR3-202ENST00000367427 NANOS1Q8WY41 292 aaKnown RBP13.34□□□□□ -0.27
CFHR3-202ENST00000367427 OCSTAMPQ9BR26 566 aa13.34□□□□□ -0.27
CFHR3-202ENST00000367427 FKBPLQ9UIM3 349 aa13.34□□□□□ -0.27
CFHR3-202ENST00000367427 PGPEP1Q9NXJ5 209 aa13.33□□□□□ -0.28
CFHR3-202ENST00000367427 KCTD15Q96SI1 283 aaPredicted RBP13.32□□□□□ -0.28
CFHR3-202ENST00000367427 ARHGAP9Q9BRR9 750 aa13.32□□□□□ -0.28
CFHR3-202ENST00000367427 FIGNL2A6NMB9 653 aa13.3□□□□□ -0.28
CFHR3-202ENST00000367427 CDV3Q9UKY7 258 aaKnown RBP13.3□□□□□ -0.28
CFHR3-202ENST00000367427 LOC100996750A0A140TA64 210 aa13.29□□□□□ -0.28
CFHR3-202ENST00000367427 KRTAP4-6Q9BYQ5 205 aa13.29□□□□□ -0.28
CFHR3-202ENST00000367427 SLC35F4A4IF30 521 aa13.28□□□□□ -0.28
CFHR3-202ENST00000367427 SKIV2LQ15477 1246 aaKnown RBP13.28□□□□□ -0.28
CFHR3-202ENST00000367427 CCDC155Q8N6L0 562 aa13.28□□□□□ -0.28
CFHR3-202ENST00000367427 CNTNAP3BQ96NU0 1288 aa13.28□□□□□ -0.28
CFHR3-202ENST00000367427 CNTNAP3Q9BZ76 1288 aa13.28□□□□□ -0.28
CFHR3-202ENST00000367427 ZC3H4Q9UPT8 1303 aaKnown RBP13.28□□□□□ -0.28
CFHR3-202ENST00000367427 NR6A1Q15406 480 aa13.27□□□□□ -0.29
CFHR3-202ENST00000367427 PPP2R2DQ66LE6 453 aa13.27□□□□□ -0.29
CFHR3-202ENST00000367427 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.29
CFHR3-202ENST00000367427 SUPT5HO00267 1087 aaKnown RBP13.26□□□□□ -0.29
CFHR3-202ENST00000367427 INTS6LQ5JSJ4 861 aaKnown RBP13.26□□□□□ -0.29
CFHR3-202ENST00000367427 SLC10A4Q96EP9 437 aa13.26□□□□□ -0.29
CFHR3-202ENST00000367427 DHX9Q08211 1270 aaKnown RBP13.25□□□□□ -0.29
CFHR3-202ENST00000367427 PROCA1Q8NCQ7 364 aaPredicted RBP13.25□□□□□ -0.29
CFHR3-202ENST00000367427 COL25A1Q9BXS0 654 aaPredicted RBP13.25□□□□□ -0.29
CFHR3-202ENST00000367427 RNFT1Q5M7Z0 435 aa13.24□□□□□ -0.29
CFHR3-202ENST00000367427 ZBTB33Q86T24 672 aa13.24□□□□□ -0.29
CFHR3-202ENST00000367427 AGBL1Q96MI9 1066 aa13.24□□□□□ -0.29
CFHR3-202ENST00000367427 GPSM3Q9Y4H4 160 aa13.24□□□□□ -0.29
CFHR3-202ENST00000367427 CTSOP43234 321 aaPredicted RBP13.23□□□□□ -0.29
CFHR3-202ENST00000367427 SH3D19Q5HYK7 790 aa13.23□□□□□ -0.29
CFHR3-202ENST00000367427 GPBP1L1Q9HC44 474 aaPredicted RBP13.22□□□□□ -0.29
CFHR3-202ENST00000367427 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
CFHR3-202ENST00000367427 PTK2Q05397 1052 aa13.21□□□□□ -0.29
CFHR3-202ENST00000367427 ITGA6P23229 1130 aa13.2□□□□□ -0.3
CFHR3-202ENST00000367427 ZNF385CQ66K41 422 aaPredicted RBP13.2□□□□□ -0.3
CFHR3-202ENST00000367427 ADAM32Q8TC27 787 aa13.2□□□□□ -0.3
CFHR3-202ENST00000367427 INSM2Q96T92 566 aaPredicted RBP13.2□□□□□ -0.3
CFHR3-202ENST00000367427 SLURP2P0DP57 97 aa13.19□□□□□ -0.3
CFHR3-202ENST00000367427 KCTD17Q8N5Z5 321 aa13.19□□□□□ -0.3
CFHR3-202ENST00000367427 EPS8L1Q8TE68 723 aa13.19□□□□□ -0.3
CFHR3-202ENST00000367427 SENP3-EIF4A1A0A087X0R7 540 aa13.18□□□□□ -0.3
CFHR3-202ENST00000367427 RELBQ01201 579 aa13.18□□□□□ -0.3
CFHR3-202ENST00000367427 VWA5B2Q8N398 1253 aa13.18□□□□□ -0.3
CFHR3-202ENST00000367427 RASSF7Q02833 373 aa13.17□□□□□ -0.3
CFHR3-202ENST00000367427 KDF1Q8NAX2 398 aaPredicted RBP13.17□□□□□ -0.3
CFHR3-202ENST00000367427 IL27Q8NEV9 243 aa13.17□□□□□ -0.3
CFHR3-202ENST00000367427 RNF217Q8TC41 542 aa13.17□□□□□ -0.3
CFHR3-202ENST00000367427 KDM4CQ9H3R0 1056 aa13.17□□□□□ -0.3
CFHR3-202ENST00000367427 TMPRSS4Q9NRS4 437 aa13.17□□□□□ -0.3
CFHR3-202ENST00000367427 LILRA1O75019 489 aa13.16□□□□□ -0.3
CFHR3-202ENST00000367427 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
CFHR3-202ENST00000367427 FAM117AQ9C073 453 aa13.16□□□□□ -0.3
CFHR3-202ENST00000367427 SUZ12Q15022 739 aaKnown RBP13.15□□□□□ -0.3
CFHR3-202ENST00000367427 TMEM151AQ8N4L1 468 aa13.15□□□□□ -0.3
CFHR3-202ENST00000367427 WHAMMQ8TF30 809 aa13.15□□□□□ -0.3
CFHR3-202ENST00000367427 ZNF395Q9H8N7 513 aaPredicted RBP13.15□□□□□ -0.3
CFHR3-202ENST00000367427 ARHGEF15O94989 841 aa13.14□□□□□ -0.31
CFHR3-202ENST00000367427 ZNF784Q8NCA9 323 aaPredicted RBP13.14□□□□□ -0.31
CFHR3-202ENST00000367427 AP1G2O75843 785 aa13.13□□□□□ -0.31
CFHR3-202ENST00000367427 SV2AQ7L0J3 742 aa13.13□□□□□ -0.31
CFHR3-202ENST00000367427 HMX1Q9NP08 348 aaPredicted RBP13.13□□□□□ -0.31
CFHR3-202ENST00000367427 ESPNB1AK53 854 aa13.12□□□□□ -0.31
CFHR3-202ENST00000367427 GDF11O95390 407 aa13.12□□□□□ -0.31
CFHR3-202ENST00000367427 ADH1AP07327 375 aa13.12□□□□□ -0.31
CFHR3-202ENST00000367427 NBPF20Q3BBV1 942 aa13.12□□□□□ -0.31
CFHR3-202ENST00000367427 FOXD4L5Q5VV16 416 aaPredicted RBP13.12□□□□□ -0.31
CFHR3-202ENST00000367427 POLMQ9NP87 494 aaPredicted RBP13.12□□□□□ -0.31
CFHR3-202ENST00000367427 ERVH48-1M5A8F1 160 aa13.11□□□□□ -0.31
CFHR3-202ENST00000367427 DDRGK1Q96HY6 314 aa13.11□□□□□ -0.31
CFHR3-202ENST00000367427 PTGIRP43119 386 aa13.1□□□□□ -0.31
CFHR3-202ENST00000367427 SVOPQ8N4V2 548 aa13.09□□□□□ -0.31
CFHR3-202ENST00000367427 CDC14CA4D256 554 aa13.08□□□□□ -0.32
CFHR3-202ENST00000367427 RNF225M0QZC1 329 aaPredicted RBP13.08□□□□□ -0.32
CFHR3-202ENST00000367427 USP17L8P0C7I0 530 aa13.07□□□□□ -0.32
CFHR3-202ENST00000367427 DZIP3Q86Y13 1208 aaKnown RBP13.06□□□□□ -0.32
CFHR3-202ENST00000367427 CUEDC1Q9NWM3 386 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms