RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 WASHC2AQ641Q2 1341 aa13.6□□□□□ -0.23
NUP43-202ENST00000367402 KIAA0232Q92628 1395 aa13.59□□□□□ -0.23
NUP43-202ENST00000367402 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
NUP43-202ENST00000367402 FYB1O15117 783 aa13.59□□□□□ -0.23
NUP43-202ENST00000367402 GABBR2O75899 941 aa13.59□□□□□ -0.23
NUP43-202ENST00000367402 CHRNA2Q15822 529 aa13.59□□□□□ -0.23
NUP43-202ENST00000367402 GGNBP2Q9H3C7 697 aa13.59□□□□□ -0.23
NUP43-202ENST00000367402 USP31Q70CQ4 1352 aa13.58□□□□□ -0.23
NUP43-202ENST00000367402 NSD3Q9BZ95 1437 aa13.58□□□□□ -0.24
NUP43-202ENST00000367402 POTEAQ6S8J7 498 aa13.58□□□□□ -0.24
NUP43-202ENST00000367402 QTRT2Q9H974 415 aaKnown RBP13.58□□□□□ -0.24
NUP43-202ENST00000367402 MON2Q7Z3U7 1717 aa13.58□□□□□ -0.24
NUP43-202ENST00000367402 PIK3C2AO00443 1686 aa13.57□□□□□ -0.24
NUP43-202ENST00000367402 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
NUP43-202ENST00000367402 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
NUP43-202ENST00000367402 NRKQ7Z2Y5 1582 aa13.57□□□□□ -0.24
NUP43-202ENST00000367402 UNC5CLQ8IV45 518 aa13.56□□□□□ -0.24
NUP43-202ENST00000367402 TRPC5Q9UL62 973 aaPredicted RBP13.56□□□□□ -0.24
NUP43-202ENST00000367402 KNSTRNQ9Y448 316 aa13.56□□□□□ -0.24
NUP43-202ENST00000367402 MYOM1P52179 1685 aa13.56□□□□□ -0.24
NUP43-202ENST00000367402 CPDO75976 1380 aa13.55□□□□□ -0.24
NUP43-202ENST00000367402 BCL9LQ86UU0 1499 aa13.55□□□□□ -0.24
NUP43-202ENST00000367402 RXRBP28702 533 aa13.54□□□□□ -0.24
NUP43-202ENST00000367402 EVA1CP58658 441 aa13.54□□□□□ -0.24
NUP43-202ENST00000367402 ARHGEF25Q86VW2 580 aa13.54□□□□□ -0.24
NUP43-202ENST00000367402 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
NUP43-202ENST00000367402 SLIT3O75094 1523 aa13.54□□□□□ -0.24
NUP43-202ENST00000367402 SLIT2O94813 1529 aa13.54□□□□□ -0.24
NUP43-202ENST00000367402 ABCA3Q99758 1704 aa13.53□□□□□ -0.24
NUP43-202ENST00000367402 STRN4Q9NRL3 753 aa13.53□□□□□ -0.24
NUP43-202ENST00000367402 OVOS2A0A0J9YW53 1432 aa13.53□□□□□ -0.24
NUP43-202ENST00000367402 OVOS2Q6IE36 1432 aa13.53□□□□□ -0.24
NUP43-202ENST00000367402 PHRF1Q9P1Y6 1649 aaKnown RBP13.53□□□□□ -0.24
NUP43-202ENST00000367402 CRYBG1Q9Y4K1 1723 aa13.53□□□□□ -0.24
NUP43-202ENST00000367402 FBLN1P23142 703 aa13.52□□□□□ -0.25
NUP43-202ENST00000367402 AATKQ6ZMQ8 1374 aa13.51□□□□□ -0.25
NUP43-202ENST00000367402 RBM6P78332 1123 aaKnown RBP13.51□□□□□ -0.25
NUP43-202ENST00000367402 VPS72Q15906 364 aa13.51□□□□□ -0.25
NUP43-202ENST00000367402 ILDR2Q71H61 639 aa13.51□□□□□ -0.25
NUP43-202ENST00000367402 AXIN2Q9Y2T1 843 aa13.51□□□□□ -0.25
NUP43-202ENST00000367402 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
NUP43-202ENST00000367402 PER1O15534 1290 aaPredicted RBP13.5□□□□□ -0.25
NUP43-202ENST00000367402 TNNT2P45379 298 aaPredicted RBP13.5□□□□□ -0.25
NUP43-202ENST00000367402 CNGB1Q14028 1251 aaPredicted RBP13.5□□□□□ -0.25
NUP43-202ENST00000367402 GJD4Q96KN9 370 aaPredicted RBP13.5□□□□□ -0.25
NUP43-202ENST00000367402 COL14A1Q05707 1796 aaKnown RBP13.5□□□□□ -0.25
NUP43-202ENST00000367402 ATRNO75882 1429 aa13.49□□□□□ -0.25
NUP43-202ENST00000367402 AMPHP49418 695 aa13.49□□□□□ -0.25
NUP43-202ENST00000367402 RRS1Q15050 365 aaKnown RBP13.49□□□□□ -0.25
NUP43-202ENST00000367402 MORC1Q86VD1 984 aa13.49□□□□□ -0.25
NUP43-202ENST00000367402 NFAT5O94916 1531 aa13.49□□□□□ -0.25
NUP43-202ENST00000367402 MAP3K19Q56UN5 1328 aa13.48□□□□□ -0.25
NUP43-202ENST00000367402 CSB-PGBD3P0DP91 1061 aa13.48□□□□□ -0.25
NUP43-202ENST00000367402 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
NUP43-202ENST00000367402 CC2D1BQ5T0F9 858 aaKnown RBP13.48□□□□□ -0.25
NUP43-202ENST00000367402 LARP1Q6PKG0 1096 aaKnown RBP13.48□□□□□ -0.25
NUP43-202ENST00000367402 USP35Q9P2H5 1018 aa13.48□□□□□ -0.25
NUP43-202ENST00000367402 NSD2O96028 1365 aa13.47□□□□□ -0.25
NUP43-202ENST00000367402 CAMTA1Q9Y6Y1 1673 aa13.47□□□□□ -0.25
NUP43-202ENST00000367402 PPM1GO15355 546 aaPredicted RBP13.47□□□□□ -0.25
NUP43-202ENST00000367402 IP6K1Q92551 441 aa13.47□□□□□ -0.25
NUP43-202ENST00000367402 PLCH1Q4KWH8 1693 aa13.47□□□□□ -0.25
NUP43-202ENST00000367402 SPATA31A5Q5VU36 1347 aa13.46□□□□□ -0.25
NUP43-202ENST00000367402 SPATA31A7Q8IWB4 1347 aa13.46□□□□□ -0.25
NUP43-202ENST00000367402 TOM1L2Q6ZVM7 507 aa13.46□□□□□ -0.25
NUP43-202ENST00000367402 LTV1Q96GA3 475 aaPredicted RBP13.46□□□□□ -0.25
NUP43-202ENST00000367402 USP54Q70EL1 1684 aa13.46□□□□□ -0.26
NUP43-202ENST00000367402 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
NUP43-202ENST00000367402 HOXC9P31274 260 aa13.45□□□□□ -0.26
NUP43-202ENST00000367402 DDX10Q13206 875 aaKnown RBP13.45□□□□□ -0.26
NUP43-202ENST00000367402 FARP1Q9Y4F1 1045 aaPredicted RBP13.45□□□□□ -0.26
NUP43-202ENST00000367402 NWD2Q9ULI1 1742 aa13.44□□□□□ -0.26
NUP43-202ENST00000367402 SPATA31A1Q5TZJ5 1347 aa13.44□□□□□ -0.26
NUP43-202ENST00000367402 KIF20BQ96Q89 1820 aa13.44□□□□□ -0.26
NUP43-202ENST00000367402 COL5A2P05997 1499 aaPredicted RBP13.44□□□□□ -0.26
NUP43-202ENST00000367402 A0A0G2JS52 829 aa13.44□□□□□ -0.26
NUP43-202ENST00000367402 MYT1Q01538 1121 aa13.44□□□□□ -0.26
NUP43-202ENST00000367402 FAM98CQ17RN3 349 aaKnown RBP13.44□□□□□ -0.26
NUP43-202ENST00000367402 ANKRD24Q8TF21 1146 aa13.44□□□□□ -0.26
NUP43-202ENST00000367402 EMILIN1Q9Y6C2 1016 aa13.44□□□□□ -0.26
NUP43-202ENST00000367402 WDR17Q8IZU2 1322 aa13.43□□□□□ -0.26
NUP43-202ENST00000367402 ZNF316A6NFI3 1004 aaPredicted RBP13.43□□□□□ -0.26
NUP43-202ENST00000367402 TCP11L2Q8N4U5 519 aa13.43□□□□□ -0.26
NUP43-202ENST00000367402 NLRP2Q9NX02 1062 aa13.43□□□□□ -0.26
NUP43-202ENST00000367402 POLKQ9UBT6 870 aa13.43□□□□□ -0.26
NUP43-202ENST00000367402 LMO7Q8WWI1 1683 aa13.43□□□□□ -0.26
NUP43-202ENST00000367402 HSP90AB2PQ58FF8 381 aa13.42□□□□□ -0.26
NUP43-202ENST00000367402 LHX8Q68G74 356 aa13.42□□□□□ -0.26
NUP43-202ENST00000367402 SEPT12Q8IYM1 358 aa13.42□□□□□ -0.26
NUP43-202ENST00000367402 NRAPQ86VF7 1730 aa13.42□□□□□ -0.26
NUP43-202ENST00000367402 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.42□□□□□ -0.26
NUP43-202ENST00000367402 ERBB3P21860 1342 aa13.41□□□□□ -0.26
NUP43-202ENST00000367402 BLMP54132 1417 aaPredicted RBP13.41□□□□□ -0.26
NUP43-202ENST00000367402 CRB1P82279 1406 aa13.41□□□□□ -0.26
NUP43-202ENST00000367402 ONECUT3O60422 494 aaPredicted RBP13.41□□□□□ -0.26
NUP43-202ENST00000367402 RTL1A6NKG5 1358 aa13.41□□□□□ -0.26
NUP43-202ENST00000367402 FLT4P35916 1363 aa13.41□□□□□ -0.26
NUP43-202ENST00000367402 ABCC6O95255 1503 aa13.4□□□□□ -0.26
NUP43-202ENST00000367402 CLCN6P51797 869 aa13.4□□□□□ -0.26
NUP43-202ENST00000367402 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms