RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 CHMP4BQ9H444 224 aaKnown RBP15.39■□□□□ 0.05
PTPN7-202ENST00000367279 PNPLA6Q8IY17 1366 aa15.39■□□□□ 0.05
PTPN7-202ENST00000367279 TMEM131LA2VDJ0 1609 aa15.39■□□□□ 0.05
PTPN7-202ENST00000367279 WASLO00401 505 aaPredicted RBP15.39■□□□□ 0.05
PTPN7-202ENST00000367279 RBM42Q9BTD8 480 aaKnown RBP15.39■□□□□ 0.05
PTPN7-202ENST00000367279 PREX1Q8TCU6 1659 aa15.39■□□□□ 0.05
PTPN7-202ENST00000367279 IL13P35225 146 aa15.39■□□□□ 0.05
PTPN7-202ENST00000367279 KRT24Q2M2I5 525 aa15.39■□□□□ 0.05
PTPN7-202ENST00000367279 GCC1Q96CN9 775 aa15.39■□□□□ 0.05
PTPN7-202ENST00000367279 IFT57Q9NWB7 429 aa15.39■□□□□ 0.05
PTPN7-202ENST00000367279 PPIP5K1Q6PFW1 1433 aa15.38■□□□□ 0.05
PTPN7-202ENST00000367279 FAM135BQ49AJ0 1406 aa15.38■□□□□ 0.05
PTPN7-202ENST00000367279 TBC1D9Q6ZT07 1266 aa15.37■□□□□ 0.05
PTPN7-202ENST00000367279 PANK2Q9BZ23 570 aa15.37■□□□□ 0.05
PTPN7-202ENST00000367279 ARHGEF40Q8TER5 1519 aa15.37■□□□□ 0.05
PTPN7-202ENST00000367279 BMP2KLQ5H9B9 411 aa15.37■□□□□ 0.05
PTPN7-202ENST00000367279 AEBP1Q8IUX7 1158 aa15.37■□□□□ 0.05
PTPN7-202ENST00000367279 LMOD3Q0VAK6 560 aa15.37■□□□□ 0.05
PTPN7-202ENST00000367279 SULT6B1Q6IMI4 303 aa15.37■□□□□ 0.05
PTPN7-202ENST00000367279 ZNF428Q96B54 188 aa15.36■□□□□ 0.05
PTPN7-202ENST00000367279 MAP2P11137 1827 aaKnown RBP15.36■□□□□ 0.05
PTPN7-202ENST00000367279 SIRT2Q8IXJ6 389 aa15.36■□□□□ 0.05
PTPN7-202ENST00000367279 API5Q9BZZ5 524 aaKnown RBP15.36■□□□□ 0.05
PTPN7-202ENST00000367279 RIMS2Q9UQ26 1411 aa15.36■□□□□ 0.05
PTPN7-202ENST00000367279 MED14O60244 1454 aa15.36■□□□□ 0.05
PTPN7-202ENST00000367279 XRCC6P12956 609 aaKnown RBP eCLIP15.35■□□□□ 0.05
PTPN7-202ENST00000367279 MCM10Q7L590 875 aa15.35■□□□□ 0.05
PTPN7-202ENST00000367279 FAM43AQ8N2R8 423 aa15.35■□□□□ 0.05
PTPN7-202ENST00000367279 CFAP44Q96MT7 982 aa15.35■□□□□ 0.05
PTPN7-202ENST00000367279 KIF20BQ96Q89 1820 aa15.35■□□□□ 0.05
PTPN7-202ENST00000367279 RBM25P49756 843 aaKnown RBP15.34■□□□□ 0.05
PTPN7-202ENST00000367279 C16orf71Q8IYS4 520 aaPredicted RBP15.34■□□□□ 0.05
PTPN7-202ENST00000367279 RICTORQ6R327 1708 aa15.34■□□□□ 0.05
PTPN7-202ENST00000367279 ANKRD26Q9UPS8 1709 aa15.34■□□□□ 0.05
PTPN7-202ENST00000367279 DDX11L8A8MPP1 907 aa15.34■□□□□ 0.05
PTPN7-202ENST00000367279 CD2BP2O95400 341 aaKnown RBP15.34■□□□□ 0.05
PTPN7-202ENST00000367279 TNPO1Q92973 898 aaKnown RBP15.34■□□□□ 0.05
PTPN7-202ENST00000367279 CCDC61Q9Y6R9 512 aa15.34■□□□□ 0.05
PTPN7-202ENST00000367279 MIS18AQ9NYP9 233 aa15.34■□□□□ 0.05
PTPN7-202ENST00000367279 ARHGAP45Q92619 1136 aa15.33■□□□□ 0.04
PTPN7-202ENST00000367279 SLC4A10Q6U841 1118 aa15.33■□□□□ 0.04
PTPN7-202ENST00000367279 CDC45O75419 566 aa15.32■□□□□ 0.04
PTPN7-202ENST00000367279 SMARCA5O60264 1052 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-202ENST00000367279 GBP4Q96PP9 640 aa15.32■□□□□ 0.04
PTPN7-202ENST00000367279 TSPOAP1O95153 1857 aa15.32■□□□□ 0.04
PTPN7-202ENST00000367279 METP08581 1390 aa15.32■□□□□ 0.04
PTPN7-202ENST00000367279 RRAGDQ9NQL2 400 aaPredicted RBP15.31■□□□□ 0.04
PTPN7-202ENST00000367279 ABCC4O15439 1325 aa15.31■□□□□ 0.04
PTPN7-202ENST00000367279 EDC4Q6P2E9 1401 aaKnown RBP15.3■□□□□ 0.04
PTPN7-202ENST00000367279 K7ELQ4 463 aaPredicted RBP15.3■□□□□ 0.04
PTPN7-202ENST00000367279 ZNF853P0CG23 659 aa15.3■□□□□ 0.04
PTPN7-202ENST00000367279 OTUD7AQ8TE49 926 aaPredicted RBP15.3■□□□□ 0.04
PTPN7-202ENST00000367279 ATP7BP35670 1465 aa15.3■□□□□ 0.04
PTPN7-202ENST00000367279 SNX21Q969T3 373 aa15.3■□□□□ 0.04
PTPN7-202ENST00000367279 ZNF692Q9BU19 519 aaPredicted RBP15.29■□□□□ 0.04
PTPN7-202ENST00000367279 CLTCQ00610 1675 aaKnown RBP15.29■□□□□ 0.04
PTPN7-202ENST00000367279 BRPF1P55201 1214 aaPredicted RBP15.29■□□□□ 0.04
PTPN7-202ENST00000367279 EIF4A2Q14240 407 aaKnown RBP15.29■□□□□ 0.04
PTPN7-202ENST00000367279 A2ML1A8K2U0 1454 aa15.29■□□□□ 0.04
PTPN7-202ENST00000367279 GSPT1P15170 499 aaKnown RBP15.28■□□□□ 0.04
PTPN7-202ENST00000367279 NCLP19338 710 aaKnown RBP15.28■□□□□ 0.04
PTPN7-202ENST00000367279 HSP90AB2PQ58FF8 381 aa15.28■□□□□ 0.04
PTPN7-202ENST00000367279 KIF2CQ99661 725 aa15.28■□□□□ 0.04
PTPN7-202ENST00000367279 PTCH1Q13635 1447 aa15.28■□□□□ 0.04
PTPN7-202ENST00000367279 SSFA2P28290 1259 aa15.28■□□□□ 0.04
PTPN7-202ENST00000367279 PLEKHM2Q8IWE5 1019 aa15.28■□□□□ 0.04
PTPN7-202ENST00000367279 GAS2L2Q8NHY3 880 aa15.28■□□□□ 0.04
PTPN7-202ENST00000367279 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.27■□□□□ 0.04
PTPN7-202ENST00000367279 NECTIN2Q92692 538 aa15.27■□□□□ 0.04
PTPN7-202ENST00000367279 SLC4A2P04920 1241 aa15.27■□□□□ 0.03
PTPN7-202ENST00000367279 GRPEL1Q9HAV7 217 aa15.27■□□□□ 0.03
PTPN7-202ENST00000367279 MEIS3Q99687 375 aa15.26■□□□□ 0.03
PTPN7-202ENST00000367279 CPS1P31327 1500 aa15.26■□□□□ 0.03
PTPN7-202ENST00000367279 MRE11P49959 708 aa15.26■□□□□ 0.03
PTPN7-202ENST00000367279 F6X3S4 739 aa15.25■□□□□ 0.03
PTPN7-202ENST00000367279 GOLGA6L22H0YM25 854 aa15.25■□□□□ 0.03
PTPN7-202ENST00000367279 RTF1Q92541 710 aaKnown RBP15.25■□□□□ 0.03
PTPN7-202ENST00000367279 PRR36Q9H6K5 1346 aa15.25■□□□□ 0.03
PTPN7-202ENST00000367279 FOXO3O43524 673 aa15.25■□□□□ 0.03
PTPN7-202ENST00000367279 FSD2A1L4K1 749 aa15.25■□□□□ 0.03
PTPN7-202ENST00000367279 HDGFP51858 240 aaKnown RBP15.25■□□□□ 0.03
PTPN7-202ENST00000367279 CASC1Q6TDU7 716 aa15.25■□□□□ 0.03
PTPN7-202ENST00000367279 DCTPP1Q9H773 170 aa15.25■□□□□ 0.03
PTPN7-202ENST00000367279 CDK12Q9NYV4 1490 aaPredicted RBP15.24■□□□□ 0.03
PTPN7-202ENST00000367279 ACEP12821 1306 aa15.24■□□□□ 0.03
PTPN7-202ENST00000367279 CPSF1Q10570 1443 aaKnown RBP15.24■□□□□ 0.03
PTPN7-202ENST00000367279 RAB3GAP1Q15042 981 aa15.24■□□□□ 0.03
PTPN7-202ENST00000367279 TTC22Q5TAA0 569 aa15.24■□□□□ 0.03
PTPN7-202ENST00000367279 NAP1L5Q96NT1 182 aaPredicted RBP15.24■□□□□ 0.03
PTPN7-202ENST00000367279 SLC26A8Q96RN1 970 aa15.24■□□□□ 0.03
PTPN7-202ENST00000367279 CIZ1Q9ULV3 898 aaPredicted RBP15.24■□□□□ 0.03
PTPN7-202ENST00000367279 TRIM44Q96DX7 344 aaPredicted RBP15.23■□□□□ 0.03
PTPN7-202ENST00000367279 TSPYL4Q9UJ04 414 aa15.23■□□□□ 0.03
PTPN7-202ENST00000367279 MSH6P52701 1360 aa15.23■□□□□ 0.03
PTPN7-202ENST00000367279 PIK3R4Q99570 1358 aa15.23■□□□□ 0.03
PTPN7-202ENST00000367279 TTC21BQ7Z4L5 1316 aa15.23■□□□□ 0.03
PTPN7-202ENST00000367279 FOXD4L5Q5VV16 416 aaPredicted RBP15.23■□□□□ 0.03
PTPN7-202ENST00000367279 INTS3Q68E01 1043 aaKnown RBP15.23■□□□□ 0.03
PTPN7-202ENST00000367279 ANKRD44Q8N8A2 993 aa15.23■□□□□ 0.03
PTPN7-202ENST00000367279 FOXD4L4Q8WXT5 416 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms