RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 BCL9O00512 1426 aa16.89■□□□□ 0.29
MRPL55-213ENST00000366740 KAT6BQ8WYB5 2073 aa16.89■□□□□ 0.29
MRPL55-213ENST00000366740 CABP2Q9NPB3 220 aa16.89■□□□□ 0.29
MRPL55-213ENST00000366740 NFAT5O94916 1531 aa16.89■□□□□ 0.29
MRPL55-213ENST00000366740 BTAF1O14981 1849 aa16.89■□□□□ 0.29
MRPL55-213ENST00000366740 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
MRPL55-213ENST00000366740 QSER1Q2KHR3 1735 aa16.87■□□□□ 0.29
MRPL55-213ENST00000366740 PLSCR1O15162 318 aa16.87■□□□□ 0.29
MRPL55-213ENST00000366740 SPON1Q9HCB6 807 aa16.87■□□□□ 0.29
MRPL55-213ENST00000366740 KCNQ2O43526 872 aa16.86■□□□□ 0.29
MRPL55-213ENST00000366740 PAPPAQ13219 1627 aa16.85■□□□□ 0.29
MRPL55-213ENST00000366740 NLRP6P59044 892 aa16.85■□□□□ 0.29
MRPL55-213ENST00000366740 WDR17Q8IZU2 1322 aa16.85■□□□□ 0.29
MRPL55-213ENST00000366740 COL24A1Q17RW2 1714 aa16.84■□□□□ 0.29
MRPL55-213ENST00000366740 DDB1Q16531 1140 aa16.84■□□□□ 0.29
MRPL55-213ENST00000366740 CABP1Q9NZU7 370 aa16.84■□□□□ 0.29
MRPL55-213ENST00000366740 FAM208AQ9UK61 1670 aaKnown RBP16.84■□□□□ 0.29
MRPL55-213ENST00000366740 YY1P25490 414 aa16.83■□□□□ 0.28
MRPL55-213ENST00000366740 TUBGCP6Q96RT7 1819 aa16.83■□□□□ 0.28
MRPL55-213ENST00000366740 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
MRPL55-213ENST00000366740 BCL11BQ9C0K0 894 aaPredicted RBP16.82■□□□□ 0.28
MRPL55-213ENST00000366740 ANO8Q9HCE9 1232 aaPredicted RBP16.82■□□□□ 0.28
MRPL55-213ENST00000366740 AXIN2Q9Y2T1 843 aa16.82■□□□□ 0.28
MRPL55-213ENST00000366740 ZBTB7CA1YPR0 619 aa16.81■□□□□ 0.28
MRPL55-213ENST00000366740 TRIM26Q12899 539 aaPredicted RBP16.81■□□□□ 0.28
MRPL55-213ENST00000366740 PTF1AQ7RTS3 328 aa16.81■□□□□ 0.28
MRPL55-213ENST00000366740 CDCA7Q9BWT1 371 aaPredicted RBP16.81■□□□□ 0.28
MRPL55-213ENST00000366740 PPP1R1BQ9UD71 204 aaPredicted RBP16.81■□□□□ 0.28
MRPL55-213ENST00000366740 TNS2Q63HR2 1409 aa16.8■□□□□ 0.28
MRPL55-213ENST00000366740 EVC2Q86UK5 1308 aa16.8■□□□□ 0.28
MRPL55-213ENST00000366740 ARHGEF25Q86VW2 580 aa16.8■□□□□ 0.28
MRPL55-213ENST00000366740 MARCH10Q8NA82 808 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-213ENST00000366740 RGPD2P0DJD1 1756 aa16.79■□□□□ 0.28
MRPL55-213ENST00000366740 TTC21BQ7Z4L5 1316 aa16.78■□□□□ 0.28
MRPL55-213ENST00000366740 TTC21AQ8NDW8 1320 aa16.78■□□□□ 0.28
MRPL55-213ENST00000366740 PROM2Q8N271 834 aa16.78■□□□□ 0.28
MRPL55-213ENST00000366740 KCNH5Q8NCM2 988 aa16.78■□□□□ 0.28
MRPL55-213ENST00000366740 SHANK3Q9BYB0 1731 aa16.78■□□□□ 0.28
MRPL55-213ENST00000366740 CCDC7Q96M83 1385 aa16.77■□□□□ 0.28
MRPL55-213ENST00000366740 ZNF692Q9BU19 519 aaPredicted RBP16.77■□□□□ 0.28
MRPL55-213ENST00000366740 CARD10Q9BWT7 1032 aa16.77■□□□□ 0.28
MRPL55-213ENST00000366740 LY75O60449 1722 aa16.76■□□□□ 0.27
MRPL55-213ENST00000366740 PDGFDQ9GZP0 370 aaPredicted RBP16.76■□□□□ 0.27
MRPL55-213ENST00000366740 L3MBTL2Q969R5 705 aa16.75■□□□□ 0.27
MRPL55-213ENST00000366740 SIN3AQ96ST3 1273 aa16.75■□□□□ 0.27
MRPL55-213ENST00000366740 DOT1LQ8TEK3 1739 aa16.75■□□□□ 0.27
MRPL55-213ENST00000366740 CD163L1Q9NR16 1453 aa16.74■□□□□ 0.27
MRPL55-213ENST00000366740 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
MRPL55-213ENST00000366740 PTGER2P43116 358 aa16.74■□□□□ 0.27
MRPL55-213ENST00000366740 SBNO2Q9Y2G9 1366 aa16.74■□□□□ 0.27
MRPL55-213ENST00000366740 TXNRD1Q16881 649 aa16.73■□□□□ 0.27
MRPL55-213ENST00000366740 ROCK2O75116 1388 aaKnown RBP16.73■□□□□ 0.27
MRPL55-213ENST00000366740 USP31Q70CQ4 1352 aa16.73■□□□□ 0.27
MRPL55-213ENST00000366740 KTN1Q86UP2 1357 aaKnown RBP16.73■□□□□ 0.27
MRPL55-213ENST00000366740 EXOC5O00471 708 aa16.71■□□□□ 0.27
MRPL55-213ENST00000366740 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.27
MRPL55-213ENST00000366740 SLC15A2Q16348 729 aa16.71■□□□□ 0.27
MRPL55-213ENST00000366740 ZBTB7AO95365 584 aa16.7■□□□□ 0.26
MRPL55-213ENST00000366740 STK32BQ9NY57 414 aa16.7■□□□□ 0.26
MRPL55-213ENST00000366740 ERBB3P21860 1342 aa16.7■□□□□ 0.26
MRPL55-213ENST00000366740 UTRNP46939 3433 aa16.69■□□□□ 0.26
MRPL55-213ENST00000366740 SOX12O15370 315 aa16.69■□□□□ 0.26
MRPL55-213ENST00000366740 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
MRPL55-213ENST00000366740 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
MRPL55-213ENST00000366740 NEUROD1Q13562 356 aa16.67■□□□□ 0.26
MRPL55-213ENST00000366740 MTFR1LQ9H019 292 aa16.67■□□□□ 0.26
MRPL55-213ENST00000366740 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
MRPL55-213ENST00000366740 MAP3K5Q99683 1374 aa16.65■□□□□ 0.26
MRPL55-213ENST00000366740 SYT17Q9BSW7 474 aa16.65■□□□□ 0.26
MRPL55-213ENST00000366740 FHDC1Q9C0D6 1143 aaPredicted RBP16.65■□□□□ 0.26
MRPL55-213ENST00000366740 EDC4Q6P2E9 1401 aaKnown RBP16.64■□□□□ 0.25
MRPL55-213ENST00000366740 C5P01031 1676 aa16.63■□□□□ 0.25
MRPL55-213ENST00000366740 IL2RBP14784 551 aa16.63■□□□□ 0.25
MRPL55-213ENST00000366740 KIF20BQ96Q89 1820 aa16.63■□□□□ 0.25
MRPL55-213ENST00000366740 ITGB4P16144 1822 aa16.62■□□□□ 0.25
MRPL55-213ENST00000366740 NME9Q86XW9 330 aa16.62■□□□□ 0.25
MRPL55-213ENST00000366740 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.62■□□□□ 0.25
MRPL55-213ENST00000366740 ACSBG1Q96GR2 724 aa16.62■□□□□ 0.25
MRPL55-213ENST00000366740 ZNF784Q8NCA9 323 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-213ENST00000366740 NLRP2Q9NX02 1062 aa16.61■□□□□ 0.25
MRPL55-213ENST00000366740 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
MRPL55-213ENST00000366740 A0A1W2PP64 1363 aa16.6■□□□□ 0.25
MRPL55-213ENST00000366740 ZNF827Q17R98 1081 aa16.59■□□□□ 0.25
MRPL55-213ENST00000366740 ARXQ96QS3 562 aa16.58■□□□□ 0.24
MRPL55-213ENST00000366740 LRRC4BQ9NT99 713 aa16.58■□□□□ 0.24
MRPL55-213ENST00000366740 HDGFL2Q7Z4V5 671 aaPredicted RBP16.57■□□□□ 0.24
MRPL55-213ENST00000366740 AKT1S1Q96B36 256 aa16.56■□□□□ 0.24
MRPL55-213ENST00000366740 PCGF6Q9BYE7 350 aa16.56■□□□□ 0.24
MRPL55-213ENST00000366740 PUS7Q96PZ0 661 aaKnown RBP16.55■□□□□ 0.24
MRPL55-213ENST00000366740 SLC12A5Q9H2X9 1139 aa16.55■□□□□ 0.24
MRPL55-213ENST00000366740 TOGARAM1Q9Y4F4 1720 aa16.55■□□□□ 0.24
MRPL55-213ENST00000366740 UBR3Q6ZT12 1888 aa16.54■□□□□ 0.24
MRPL55-213ENST00000366740 NSD2O96028 1365 aa16.54■□□□□ 0.24
MRPL55-213ENST00000366740 ANKRD36BQ8N2N9 1353 aa16.54■□□□□ 0.24
MRPL55-213ENST00000366740 PKD1L3Q7Z443 1732 aa16.54■□□□□ 0.24
MRPL55-213ENST00000366740 SLC27A3Q5K4L6 730 aa16.54■□□□□ 0.24
MRPL55-213ENST00000366740 SLC16A10Q8TF71 515 aa16.54■□□□□ 0.24
MRPL55-213ENST00000366740 IP6K1Q92551 441 aa16.54■□□□□ 0.24
MRPL55-213ENST00000366740 CARD11Q9BXL7 1154 aa16.54■□□□□ 0.24
MRPL55-213ENST00000366740 PNPLA7Q6ZV29 1317 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms