RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 ZC3H6P61129 1189 aaKnown RBP16.28■□□□□ 0.2
CAPN9-203ENST00000366666 AMPHP49418 695 aa16.27■□□□□ 0.2
CAPN9-203ENST00000366666 ARHGEF10O15013 1369 aa16.27■□□□□ 0.19
CAPN9-203ENST00000366666 U2AF1L5P0DN76 240 aaPredicted RBP16.27■□□□□ 0.19
CAPN9-203ENST00000366666 HOXC9P31274 260 aa16.27■□□□□ 0.19
CAPN9-203ENST00000366666 U2AF1Q01081 240 aaKnown RBP eCLIP16.27■□□□□ 0.19
CAPN9-203ENST00000366666 EIF4A2Q14240 407 aaKnown RBP16.27■□□□□ 0.19
CAPN9-203ENST00000366666 KCNH5Q8NCM2 988 aa16.27■□□□□ 0.19
CAPN9-203ENST00000366666 COL16A1Q07092 1604 aaPredicted RBP16.26■□□□□ 0.19
CAPN9-203ENST00000366666 FLT4P35916 1363 aa16.26■□□□□ 0.19
CAPN9-203ENST00000366666 IQSEC2Q5JU85 1478 aa16.26■□□□□ 0.19
CAPN9-203ENST00000366666 ARHGEF25Q86VW2 580 aa16.26■□□□□ 0.19
CAPN9-203ENST00000366666 SALL2Q9Y467 1007 aaPredicted RBP16.26■□□□□ 0.19
CAPN9-203ENST00000366666 RGPD2P0DJD1 1756 aa16.25■□□□□ 0.19
CAPN9-203ENST00000366666 RGPD1P0DJD0 1748 aa16.24■□□□□ 0.19
CAPN9-203ENST00000366666 AXIN2Q9Y2T1 843 aa16.24■□□□□ 0.19
CAPN9-203ENST00000366666 HMOX1P09601 288 aa16.23■□□□□ 0.19
CAPN9-203ENST00000366666 LTV1Q96GA3 475 aaPredicted RBP16.23■□□□□ 0.19
CAPN9-203ENST00000366666 COL18A1P39060 1754 aa16.23■□□□□ 0.19
CAPN9-203ENST00000366666 NUDCQ9Y266 331 aa16.23■□□□□ 0.19
CAPN9-203ENST00000366666 CHRNA2Q15822 529 aa16.22■□□□□ 0.19
CAPN9-203ENST00000366666 IP6K1Q92551 441 aa16.22■□□□□ 0.19
CAPN9-203ENST00000366666 LRRC59Q96AG4 307 aaKnown RBP16.22■□□□□ 0.19
CAPN9-203ENST00000366666 AEBP1Q8IUX7 1158 aa16.21■□□□□ 0.19
CAPN9-203ENST00000366666 KIAA0232Q92628 1395 aa16.21■□□□□ 0.19
CAPN9-203ENST00000366666 APAF1O14727 1248 aa16.2■□□□□ 0.18
CAPN9-203ENST00000366666 PLEKHF1Q96S99 279 aa16.2■□□□□ 0.18
CAPN9-203ENST00000366666 RTL1A6NKG5 1358 aa16.2■□□□□ 0.18
CAPN9-203ENST00000366666 KIF24Q5T7B8 1368 aa16.2■□□□□ 0.18
CAPN9-203ENST00000366666 EYA1Q99502 592 aa16.19■□□□□ 0.18
CAPN9-203ENST00000366666 RSPH6AQ9H0K4 717 aa16.19■□□□□ 0.18
CAPN9-203ENST00000366666 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
CAPN9-203ENST00000366666 RRP7AQ9Y3A4 280 aaKnown RBP16.19■□□□□ 0.18
CAPN9-203ENST00000366666 ZBED9Q6R2W3 1325 aa16.18■□□□□ 0.18
CAPN9-203ENST00000366666 PRKAR2BP31323 418 aa16.17■□□□□ 0.18
CAPN9-203ENST00000366666 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
CAPN9-203ENST00000366666 SULT6B1Q6IMI4 303 aa16.17■□□□□ 0.18
CAPN9-203ENST00000366666 USHBP1Q8N6Y0 703 aa16.17■□□□□ 0.18
CAPN9-203ENST00000366666 RUNDC1Q96C34 613 aa16.17■□□□□ 0.18
CAPN9-203ENST00000366666 TCP11L2Q8N4U5 519 aa16.17■□□□□ 0.18
CAPN9-203ENST00000366666 PHACTR3Q96KR7 559 aa16.17■□□□□ 0.18
CAPN9-203ENST00000366666 NEUROD2Q15784 382 aa16.16■□□□□ 0.18
CAPN9-203ENST00000366666 CPDO75976 1380 aa16.16■□□□□ 0.18
CAPN9-203ENST00000366666 FCHSD2O94868 740 aa16.16■□□□□ 0.18
CAPN9-203ENST00000366666 NBPF6Q5VWK0 638 aa16.16■□□□□ 0.18
CAPN9-203ENST00000366666 NBPF4Q96M43 638 aa16.16■□□□□ 0.18
CAPN9-203ENST00000366666 LMO7Q8WWI1 1683 aa16.15■□□□□ 0.18
CAPN9-203ENST00000366666 FKBP8Q14318 412 aa16.15■□□□□ 0.18
CAPN9-203ENST00000366666 ANKRD24Q8TF21 1146 aa16.15■□□□□ 0.18
CAPN9-203ENST00000366666 IGSF1Q8N6C5 1336 aa16.15■□□□□ 0.18
CAPN9-203ENST00000366666 CAMTA1Q9Y6Y1 1673 aa16.15■□□□□ 0.18
CAPN9-203ENST00000366666 PRDM11Q9NQV5 511 aa16.14■□□□□ 0.17
CAPN9-203ENST00000366666 NEFLP07196 543 aa16.14■□□□□ 0.17
CAPN9-203ENST00000366666 DLG5Q8TDM6 1919 aa16.14■□□□□ 0.17
CAPN9-203ENST00000366666 ERBB3P21860 1342 aa16.13■□□□□ 0.17
CAPN9-203ENST00000366666 FAM83GA6ND36 823 aa16.13■□□□□ 0.17
CAPN9-203ENST00000366666 PRKCSHP14314 528 aaPredicted RBP16.12■□□□□ 0.17
CAPN9-203ENST00000366666 KDRP35968 1356 aa16.12■□□□□ 0.17
CAPN9-203ENST00000366666 HSPA1LP34931 641 aa16.11■□□□□ 0.17
CAPN9-203ENST00000366666 CDCA7LQ96GN5 454 aa16.11■□□□□ 0.17
CAPN9-203ENST00000366666 NUTM2BA6NNL0 878 aaPredicted RBP16.11■□□□□ 0.17
CAPN9-203ENST00000366666 NUTM2EB1AL46 878 aaPredicted RBP16.11■□□□□ 0.17
CAPN9-203ENST00000366666 NUTM2AQ8IVF1 878 aaPredicted RBP16.11■□□□□ 0.17
CAPN9-203ENST00000366666 ZNF521Q96K83 1311 aa16.1■□□□□ 0.17
CAPN9-203ENST00000366666 TMPOP42166 694 aaKnown RBP16.1■□□□□ 0.17
CAPN9-203ENST00000366666 MAPK8IP3Q9UPT6 1336 aa16.1■□□□□ 0.17
CAPN9-203ENST00000366666 ADAMTS2O95450 1211 aa16.1■□□□□ 0.17
CAPN9-203ENST00000366666 ABCC6O95255 1503 aa16.09■□□□□ 0.17
CAPN9-203ENST00000366666 FAM208AQ9UK61 1670 aaKnown RBP16.09■□□□□ 0.17
CAPN9-203ENST00000366666 COL5A2P05997 1499 aaPredicted RBP16.08■□□□□ 0.17
CAPN9-203ENST00000366666 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
CAPN9-203ENST00000366666 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
CAPN9-203ENST00000366666 TRIM35Q9UPQ4 493 aa16.07■□□□□ 0.16
CAPN9-203ENST00000366666 COL14A1Q05707 1796 aaKnown RBP16.07■□□□□ 0.16
CAPN9-203ENST00000366666 RIPK4P57078 832 aa16.07■□□□□ 0.16
CAPN9-203ENST00000366666 PHF23Q9BUL5 403 aaPredicted RBP16.07■□□□□ 0.16
CAPN9-203ENST00000366666 NLRP2Q9NX02 1062 aa16.07■□□□□ 0.16
CAPN9-203ENST00000366666 NCAPD2Q15021 1401 aa16.07■□□□□ 0.16
CAPN9-203ENST00000366666 PLCH1Q4KWH8 1693 aa16.06■□□□□ 0.16
CAPN9-203ENST00000366666 CSB-PGBD3P0DP91 1061 aa16.06■□□□□ 0.16
CAPN9-203ENST00000366666 STRN4Q9NRL3 753 aa16.06■□□□□ 0.16
CAPN9-203ENST00000366666 BTG4Q9NY30 223 aa16.06■□□□□ 0.16
CAPN9-203ENST00000366666 JCADQ9P266 1359 aa16.06■□□□□ 0.16
CAPN9-203ENST00000366666 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
CAPN9-203ENST00000366666 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
CAPN9-203ENST00000366666 NFE2L2Q16236 605 aa16.04■□□□□ 0.16
CAPN9-203ENST00000366666 LARP1Q6PKG0 1096 aaKnown RBP16.04■□□□□ 0.16
CAPN9-203ENST00000366666 THUMPD2Q9BTF0 503 aaKnown RBP16.04■□□□□ 0.16
CAPN9-203ENST00000366666 LRP6O75581 1613 aa16.04■□□□□ 0.16
CAPN9-203ENST00000366666 WDR17Q8IZU2 1322 aa16.04■□□□□ 0.16
CAPN9-203ENST00000366666 NEFMP07197 916 aa16.03■□□□□ 0.16
CAPN9-203ENST00000366666 DCTN1Q14203 1278 aa16.03■□□□□ 0.16
CAPN9-203ENST00000366666 ERICH6Q7L0X2 663 aa16.03■□□□□ 0.16
CAPN9-203ENST00000366666 MEGF6O75095 1541 aa16.02■□□□□ 0.15
CAPN9-203ENST00000366666 CCDC27Q2M243 656 aa16.02■□□□□ 0.15
CAPN9-203ENST00000366666 TOM1L2Q6ZVM7 507 aa16.02■□□□□ 0.15
CAPN9-203ENST00000366666 NRAPQ86VF7 1730 aa16.01■□□□□ 0.15
CAPN9-203ENST00000366666 EVA1CP58658 441 aa16.01■□□□□ 0.15
CAPN9-203ENST00000366666 GOLGA2Q08379 1002 aa16.01■□□□□ 0.15
CAPN9-203ENST00000366666 USP35Q9P2H5 1018 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms