RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 GAS6Q14393 721 aa1.89□□□□□ -2.11
RNU6-54P-201ENST00000365563 E2F4Q16254 413 aa1.89□□□□□ -2.11
RNU6-54P-201ENST00000365563 FAM161AQ3B820 660 aa1.89□□□□□ -2.11
RNU6-54P-201ENST00000365563 CD163Q86VB7 1156 aa1.89□□□□□ -2.11
RNU6-54P-201ENST00000365563 ZNF511Q8NB15 262 aa1.89□□□□□ -2.11
RNU6-54P-201ENST00000365563 TRERF1Q96PN7 1200 aa1.89□□□□□ -2.11
RNU6-54P-201ENST00000365563 FCHSD2O94868 740 aa1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 COL8A1P27658 744 aa1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 MAP2K3P46734 347 aa1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 SNRPNP63162 240 aaKnown RBP1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 ARID5BQ14865 1188 aa1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 FOXD4L6Q3SYB3 417 aaPredicted RBP1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 LINC01559Q495D7 138 aa1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 FOXD4L3Q6VB84 417 aaPredicted RBP1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 METTL3Q86U44 580 aaKnown RBP1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 ACDQ96AP0 544 aa1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 CDK15Q96Q40 435 aa1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 UNC93B1Q9H1C4 597 aa1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 COL17A1Q9UMD9 1497 aaPredicted RBP1.88□□□□□ -2.11
RNU6-54P-201ENST00000365563 SPINT1O43278 529 aa1.87□□□□□ -2.11
RNU6-54P-201ENST00000365563 DYRK3O43781 588 aa1.87□□□□□ -2.11
RNU6-54P-201ENST00000365563 AMPD1P23109 780 aa1.87□□□□□ -2.11
RNU6-54P-201ENST00000365563 CHRNA4P43681 627 aa1.87□□□□□ -2.11
RNU6-54P-201ENST00000365563 USP46P62068 366 aa1.87□□□□□ -2.11
RNU6-54P-201ENST00000365563 RSPO4Q2I0M5 234 aaPredicted RBP1.87□□□□□ -2.11
RNU6-54P-201ENST00000365563 PTCRAQ6ISU1 281 aaPredicted RBP1.87□□□□□ -2.11
RNU6-54P-201ENST00000365563 BAP1Q92560 729 aa1.87□□□□□ -2.11
RNU6-54P-201ENST00000365563 EMILIN1Q9Y6C2 1016 aa1.87□□□□□ -2.11
RNU6-54P-201ENST00000365563 NUTM2FA1L443 756 aa1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 HYAL3O43820 417 aaPredicted RBP1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 NR3C2P08235 984 aa1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 MS4A1P11836 297 aa1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 MX2P20592 715 aa1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 PTPRNQ16849 979 aa1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 PRSS36Q5K4E3 855 aa1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 TRIM22Q8IYM9 498 aa1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 OXCT2Q9BYC2 517 aaPredicted RBP1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 WDR70Q9NW82 654 aa1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 PGPEP1Q9NXJ5 209 aa1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 GDF2Q9UK05 429 aaPredicted RBP1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 KDM2AQ9Y2K7 1162 aa1.86□□□□□ -2.11
RNU6-54P-201ENST00000365563 H7C1W4 665 aa1.85□□□□□ -2.11
RNU6-54P-201ENST00000365563 KDM4AO75164 1064 aa1.85□□□□□ -2.11
RNU6-54P-201ENST00000365563 ELNP15502 786 aa1.85□□□□□ -2.11
RNU6-54P-201ENST00000365563 FSHRP23945 695 aa1.85□□□□□ -2.11
RNU6-54P-201ENST00000365563 IRAK1P51617 712 aa1.85□□□□□ -2.11
RNU6-54P-201ENST00000365563 NKAPLQ5M9Q1 402 aa1.85□□□□□ -2.11
RNU6-54P-201ENST00000365563 RETREG3Q86VR2 466 aa1.85□□□□□ -2.11
RNU6-54P-201ENST00000365563 ZNF837Q96EG3 531 aaPredicted RBP1.85□□□□□ -2.11
RNU6-54P-201ENST00000365563 POLMQ9NP87 494 aaPredicted RBP1.85□□□□□ -2.11
RNU6-54P-201ENST00000365563 RNF114Q9Y508 228 aa1.85□□□□□ -2.11
RNU6-54P-201ENST00000365563 SPATA31C1P0DKV0 1188 aa1.84□□□□□ -2.11
RNU6-54P-201ENST00000365563 JAG1P78504 1218 aa1.84□□□□□ -2.11
RNU6-54P-201ENST00000365563 KCNH2Q12809 1159 aa1.84□□□□□ -2.11
RNU6-54P-201ENST00000365563 AGERQ15109 404 aa1.84□□□□□ -2.11
RNU6-54P-201ENST00000365563 PRPF38BQ5VTL8 546 aaKnown RBP1.84□□□□□ -2.11
RNU6-54P-201ENST00000365563 CCDC116Q8IYX3 515 aa1.84□□□□□ -2.11
RNU6-54P-201ENST00000365563 GOLGA6L1Q8N7Z2 621 aa1.84□□□□□ -2.11
RNU6-54P-201ENST00000365563 RNF217Q8TC41 542 aa1.84□□□□□ -2.11
RNU6-54P-201ENST00000365563 SUV39H2Q9H5I1 410 aa1.84□□□□□ -2.11
RNU6-54P-201ENST00000365563 MAP4K5Q9Y4K4 846 aa1.84□□□□□ -2.11
RNU6-54P-201ENST00000365563 SENP3-EIF4A1A0A087X0R7 540 aa1.83□□□□□ -2.12
RNU6-54P-201ENST00000365563 SPDYE3A6NKU9 549 aa1.83□□□□□ -2.12
RNU6-54P-201ENST00000365563 SHISA8B8ZZ34 492 aa1.83□□□□□ -2.12
RNU6-54P-201ENST00000365563 GPR25O00155 361 aa1.83□□□□□ -2.12
RNU6-54P-201ENST00000365563 APBA3O96018 575 aa1.83□□□□□ -2.12
RNU6-54P-201ENST00000365563 HIC1Q14526 733 aa1.83□□□□□ -2.12
RNU6-54P-201ENST00000365563 LINC00114Q6XXX2 140 aa1.83□□□□□ -2.12
RNU6-54P-201ENST00000365563 Q6ZVU0 165 aa1.83□□□□□ -2.12
RNU6-54P-201ENST00000365563 BPHLQ86WA6 291 aaPredicted RBP1.83□□□□□ -2.12
RNU6-54P-201ENST00000365563 EDARADDQ8WWZ3 215 aa1.83□□□□□ -2.12
RNU6-54P-201ENST00000365563 TPSG1Q9NRR2 321 aa1.83□□□□□ -2.12
RNU6-54P-201ENST00000365563 EVA1BQ9NVM1 165 aa1.83□□□□□ -2.12
RNU6-54P-201ENST00000365563 HOXA2O43364 376 aa1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 H2AFB1P0C5Y9 115 aa1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 H2AFB2P0C5Z0 115 aa1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 GRM5P41594 1212 aa1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 CTSOP43234 321 aaPredicted RBP1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 PRRT3Q5FWE3 981 aa1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 SLCO4C1Q6ZQN7 724 aa1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 RIPOR1Q6ZS17 1223 aa1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 VASH1Q7L8A9 365 aaPredicted RBP1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 LYSMD3Q7Z3D4 306 aa1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 NACC1Q96RE7 527 aa1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 INSM2Q96T92 566 aaPredicted RBP1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 CUEDC1Q9NWM3 386 aaPredicted RBP1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 PHF24Q9UPV7 400 aa1.82□□□□□ -2.12
RNU6-54P-201ENST00000365563 C6orf229H3BNL8 230 aa1.81□□□□□ -2.12
RNU6-54P-201ENST00000365563 DGKGP49619 791 aa1.81□□□□□ -2.12
RNU6-54P-201ENST00000365563 DHX9Q08211 1270 aaKnown RBP1.81□□□□□ -2.12
RNU6-54P-201ENST00000365563 GTPBP3Q969Y2 492 aaKnown RBP1.81□□□□□ -2.12
RNU6-54P-201ENST00000365563 TRIM52Q96A61 297 aa1.81□□□□□ -2.12
RNU6-54P-201ENST00000365563 PCMTD2Q9NV79 361 aa1.81□□□□□ -2.12
RNU6-54P-201ENST00000365563 CD46P15529 392 aa1.8□□□□□ -2.12
RNU6-54P-201ENST00000365563 CTHP32929 405 aa1.8□□□□□ -2.12
RNU6-54P-201ENST00000365563 RELBQ01201 579 aa1.8□□□□□ -2.12
RNU6-54P-201ENST00000365563 DESI1Q6ICB0 168 aa1.8□□□□□ -2.12
RNU6-54P-201ENST00000365563 GIGYF2Q6Y7W6 1299 aaKnown RBP1.8□□□□□ -2.12
RNU6-54P-201ENST00000365563 TRMT44Q8IYL2 757 aaKnown RBP1.8□□□□□ -2.12
RNU6-54P-201ENST00000365563 FOXJ1Q92949 421 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms