RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 GPSM3Q9Y4H4 160 aa9.92□□□□□ -0.82
RNU4-28P-201ENST00000364739 ZBBXA8MT70 800 aa9.91□□□□□ -0.82
RNU4-28P-201ENST00000364739 ABL2P42684 1182 aa9.91□□□□□ -0.82
RNU4-28P-201ENST00000364739 KIFC2Q96AC6 838 aa9.91□□□□□ -0.82
RNU4-28P-201ENST00000364739 POM121Q96HA1 1249 aa9.91□□□□□ -0.82
RNU4-28P-201ENST00000364739 SOCS7O14512 581 aa9.9□□□□□ -0.82
RNU4-28P-201ENST00000364739 SNRPBP14678 240 aaKnown RBP9.9□□□□□ -0.82
RNU4-28P-201ENST00000364739 FSHRP23945 695 aa9.9□□□□□ -0.82
RNU4-28P-201ENST00000364739 SLC10A4Q96EP9 437 aa9.9□□□□□ -0.82
RNU4-28P-201ENST00000364739 APBB1O00213 710 aa9.89□□□□□ -0.83
RNU4-28P-201ENST00000364739 TERTO14746 1132 aaKnown RBP9.89□□□□□ -0.83
RNU4-28P-201ENST00000364739 IRF5Q13568 498 aa9.89□□□□□ -0.83
RNU4-28P-201ENST00000364739 DZIP3Q86Y13 1208 aaKnown RBP9.89□□□□□ -0.83
RNU4-28P-201ENST00000364739 RAB15P59190 212 aa9.88□□□□□ -0.83
RNU4-28P-201ENST00000364739 KCTD15Q96SI1 283 aaPredicted RBP9.88□□□□□ -0.83
RNU4-28P-201ENST00000364739 COG6Q9Y2V7 657 aa9.88□□□□□ -0.83
RNU4-28P-201ENST00000364739 PCDHB9Q9Y5E1 797 aa9.88□□□□□ -0.83
RNU4-28P-201ENST00000364739 NR1H3Q13133 447 aa9.87□□□□□ -0.83
RNU4-28P-201ENST00000364739 NR5A1Q13285 461 aa9.87□□□□□ -0.83
RNU4-28P-201ENST00000364739 MAP4K5Q9Y4K4 846 aa9.87□□□□□ -0.83
RNU4-28P-201ENST00000364739 WDR4P57081 412 aaKnown RBP9.86□□□□□ -0.83
RNU4-28P-201ENST00000364739 VAC14Q08AM6 782 aa9.86□□□□□ -0.83
RNU4-28P-201ENST00000364739 KLF16Q9BXK1 252 aaPredicted RBP9.86□□□□□ -0.83
RNU4-28P-201ENST00000364739 ZFAND3Q9H8U3 227 aa9.86□□□□□ -0.83
RNU4-28P-201ENST00000364739 PRM3Q9NNZ6 103 aa9.86□□□□□ -0.83
RNU4-28P-201ENST00000364739 CAPN5O15484 640 aaPredicted RBP9.85□□□□□ -0.83
RNU4-28P-201ENST00000364739 ITPKCQ96DU7 683 aa9.85□□□□□ -0.83
RNU4-28P-201ENST00000364739 ZIC2O95409 532 aaPredicted RBP9.84□□□□□ -0.83
RNU4-28P-201ENST00000364739 TIMP2P16035 220 aa9.84□□□□□ -0.83
RNU4-28P-201ENST00000364739 FLIIQ13045 1269 aa9.84□□□□□ -0.83
RNU4-28P-201ENST00000364739 LCE2CQ5TA81 110 aa9.84□□□□□ -0.83
RNU4-28P-201ENST00000364739 GIGYF1O75420 1035 aaPredicted RBP9.83□□□□□ -0.84
RNU4-28P-201ENST00000364739 BMP1P13497 986 aa9.83□□□□□ -0.84
RNU4-28P-201ENST00000364739 UBTFP17480 764 aaKnown RBP9.83□□□□□ -0.84
RNU4-28P-201ENST00000364739 INTS6LQ5JSJ4 861 aaKnown RBP9.83□□□□□ -0.84
RNU4-28P-201ENST00000364739 PPP1R26Q5T8A7 1209 aaPredicted RBP9.82□□□□□ -0.84
RNU4-28P-201ENST00000364739 CCDC116Q8IYX3 515 aa9.82□□□□□ -0.84
RNU4-28P-201ENST00000364739 CLUAP1Q96AJ1 413 aa9.82□□□□□ -0.84
RNU4-28P-201ENST00000364739 TMPRSS4Q9NRS4 437 aa9.82□□□□□ -0.84
RNU4-28P-201ENST00000364739 CDV3Q9UKY7 258 aaKnown RBP9.81□□□□□ -0.84
RNU4-28P-201ENST00000364739 NBPF20Q3BBV1 942 aa9.8□□□□□ -0.84
RNU4-28P-201ENST00000364739 ERVH48-1M5A8F1 160 aa9.79□□□□□ -0.84
RNU4-28P-201ENST00000364739 CBLBQ13191 982 aa9.79□□□□□ -0.84
RNU4-28P-201ENST00000364739 TRIM46Q7Z4K8 759 aa9.79□□□□□ -0.84
RNU4-28P-201ENST00000364739 ESPNB1AK53 854 aa9.78□□□□□ -0.84
RNU4-28P-201ENST00000364739 RAD21O60216 631 aa9.78□□□□□ -0.84
RNU4-28P-201ENST00000364739 SLC16A10Q8TF71 515 aa9.78□□□□□ -0.84
RNU4-28P-201ENST00000364739 NPAS3Q8IXF0 933 aa9.77□□□□□ -0.85
RNU4-28P-201ENST00000364739 ZNF330Q9Y3S2 320 aaPredicted RBP9.77□□□□□ -0.85
RNU4-28P-201ENST00000364739 EMILIN1Q9Y6C2 1016 aa9.77□□□□□ -0.85
RNU4-28P-201ENST00000364739 CEP126Q9P2H0 1117 aa9.76□□□□□ -0.85
RNU4-28P-201ENST00000364739 NXF1Q9UBU9 619 aaKnown RBP9.76□□□□□ -0.85
RNU4-28P-201ENST00000364739 EIF4G2P78344 907 aaKnown RBP eCLIP9.75□□□□□ -0.85
RNU4-28P-201ENST00000364739 TSGA10IPQ3SY00 556 aa9.75□□□□□ -0.85
RNU4-28P-201ENST00000364739 ZNF784Q8NCA9 323 aaPredicted RBP9.75□□□□□ -0.85
RNU4-28P-201ENST00000364739 PURBQ96QR8 312 aaKnown RBP9.75□□□□□ -0.85
RNU4-28P-201ENST00000364739 FAM181BA6NEQ2 426 aa9.74□□□□□ -0.85
RNU4-28P-201ENST00000364739 POM121CA8CG34 1229 aa9.74□□□□□ -0.85
RNU4-28P-201ENST00000364739 ADD1P35611 737 aaKnown RBP9.74□□□□□ -0.85
RNU4-28P-201ENST00000364739 DHX9Q08211 1270 aaKnown RBP9.74□□□□□ -0.85
RNU4-28P-201ENST00000364739 WASHC4Q2M389 1173 aa9.74□□□□□ -0.85
RNU4-28P-201ENST00000364739 C6orf118Q5T5N4 469 aa9.74□□□□□ -0.85
RNU4-28P-201ENST00000364739 MRPL14Q6P1L8 145 aaKnown RBP9.74□□□□□ -0.85
RNU4-28P-201ENST00000364739 ZFP42Q96MM3 310 aa9.74□□□□□ -0.85
RNU4-28P-201ENST00000364739 PGPEP1Q9NXJ5 209 aa9.74□□□□□ -0.85
RNU4-28P-201ENST00000364739 AGBL1Q96MI9 1066 aa9.73□□□□□ -0.85
RNU4-28P-201ENST00000364739 CYLDQ9NQC7 956 aa9.73□□□□□ -0.85
RNU4-28P-201ENST00000364739 GTF3C3Q9Y5Q9 886 aa9.72□□□□□ -0.85
RNU4-28P-201ENST00000364739 LILRA1O75019 489 aa9.71□□□□□ -0.86
RNU4-28P-201ENST00000364739 MCCD1P59942 119 aaPredicted RBP9.71□□□□□ -0.86
RNU4-28P-201ENST00000364739 SEMA3FQ13275 785 aa9.71□□□□□ -0.86
RNU4-28P-201ENST00000364739 MEIOBQ8N635 442 aa9.71□□□□□ -0.86
RNU4-28P-201ENST00000364739 IRF7Q92985 503 aa9.71□□□□□ -0.86
RNU4-28P-201ENST00000364739 CCDC85AQ96PX6 553 aaPredicted RBP9.71□□□□□ -0.86
RNU4-28P-201ENST00000364739 CDCA7Q9BWT1 371 aaPredicted RBP9.71□□□□□ -0.86
RNU4-28P-201ENST00000364739 PCDHB11Q9Y5F2 797 aa9.71□□□□□ -0.86
RNU4-28P-201ENST00000364739 SCTRP47872 440 aa9.7□□□□□ -0.86
RNU4-28P-201ENST00000364739 SEPT12Q8IYM1 358 aa9.7□□□□□ -0.86
RNU4-28P-201ENST00000364739 BMP2P12643 396 aa9.69□□□□□ -0.86
RNU4-28P-201ENST00000364739 RELBQ01201 579 aa9.69□□□□□ -0.86
RNU4-28P-201ENST00000364739 Q6ZVU0 165 aa9.69□□□□□ -0.86
RNU4-28P-201ENST00000364739 PHTF2Q8N3S3 785 aa9.69□□□□□ -0.86
RNU4-28P-201ENST00000364739 SOBPA7XYQ1 873 aa9.68□□□□□ -0.86
RNU4-28P-201ENST00000364739 GMPRP36959 345 aa9.68□□□□□ -0.86
RNU4-28P-201ENST00000364739 SCARF1Q14162 830 aa9.68□□□□□ -0.86
RNU4-28P-201ENST00000364739 RNF20Q5VTR2 975 aa9.68□□□□□ -0.86
RNU4-28P-201ENST00000364739 WWC1Q8IX03 1113 aa9.68□□□□□ -0.86
RNU4-28P-201ENST00000364739 LINC00528Q8N1L1 170 aa9.68□□□□□ -0.86
RNU4-28P-201ENST00000364739 FNBP4Q8N3X1 1017 aaPredicted RBP9.68□□□□□ -0.86
RNU4-28P-201ENST00000364739 ADAMTS19Q8TE59 1207 aa9.68□□□□□ -0.86
RNU4-28P-201ENST00000364739 ZNF395Q9H8N7 513 aaPredicted RBP9.68□□□□□ -0.86
RNU4-28P-201ENST00000364739 H3BM21 787 aa9.67□□□□□ -0.86
RNU4-28P-201ENST00000364739 PIK3CDO00329 1044 aa9.67□□□□□ -0.86
RNU4-28P-201ENST00000364739 SLFNL1Q499Z3 407 aa9.67□□□□□ -0.86
RNU4-28P-201ENST00000364739 PROSER2Q86WR7 435 aaPredicted RBP9.67□□□□□ -0.86
RNU4-28P-201ENST00000364739 ZSCAN1Q8NBB4 408 aa9.67□□□□□ -0.86
RNU4-28P-201ENST00000364739 ALG2Q9H553 416 aa9.67□□□□□ -0.86
RNU4-28P-201ENST00000364739 UPP2O95045 317 aa9.66□□□□□ -0.86
RNU4-28P-201ENST00000364739 HDGFL1Q5TGJ6 251 aa9.66□□□□□ -0.86
RNU4-28P-201ENST00000364739 RNF135Q8IUD6 432 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms