RNA–Protein interactions for RNA: ENST00000363727.1

RNU1-87P-201, Transcript of RNA, U1 small nuclear 87, pseudogene, humanhuman

BASIC

Gene RNU1-87P, Length 170 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-87P-201ENST00000363727 ATP9BO43861 1147 aa8.54□□□□□ -1.04
RNU1-87P-201ENST00000363727 TSGA10IPQ3SY00 556 aa8.54□□□□□ -1.04
RNU1-87P-201ENST00000363727 SPRYD7Q5W111 196 aa8.54□□□□□ -1.04
RNU1-87P-201ENST00000363727 USP17L5A8MUK1 530 aa8.53□□□□□ -1.04
RNU1-87P-201ENST00000363727 FOXC1Q12948 553 aa8.53□□□□□ -1.04
RNU1-87P-201ENST00000363727 ZNF697Q5TEC3 545 aa8.53□□□□□ -1.04
RNU1-87P-201ENST00000363727 VASH1Q7L8A9 365 aaPredicted RBP8.53□□□□□ -1.04
RNU1-87P-201ENST00000363727 TRMT44Q8IYL2 757 aaKnown RBP8.53□□□□□ -1.04
RNU1-87P-201ENST00000363727 MRGPRX2Q96LB1 330 aa8.53□□□□□ -1.04
RNU1-87P-201ENST00000363727 NBPF20Q3BBV1 942 aa8.52□□□□□ -1.05
RNU1-87P-201ENST00000363727 PHTF2Q8N3S3 785 aa8.52□□□□□ -1.05
RNU1-87P-201ENST00000363727 PLPP7Q8NBV4 271 aa8.52□□□□□ -1.05
RNU1-87P-201ENST00000363727 CCDC85AQ96PX6 553 aaPredicted RBP8.52□□□□□ -1.05
RNU1-87P-201ENST00000363727 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.05
RNU1-87P-201ENST00000363727 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
RNU1-87P-201ENST00000363727 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
RNU1-87P-201ENST00000363727 USP17L2Q6R6M4 530 aa8.51□□□□□ -1.05
RNU1-87P-201ENST00000363727 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
RNU1-87P-201ENST00000363727 WNT7AO00755 349 aa8.5□□□□□ -1.05
RNU1-87P-201ENST00000363727 NCOA4Q13772 614 aa8.5□□□□□ -1.05
RNU1-87P-201ENST00000363727 OXLD1Q5BKU9 147 aa8.5□□□□□ -1.05
RNU1-87P-201ENST00000363727 NFATC2IPQ8NCF5 419 aa8.5□□□□□ -1.05
RNU1-87P-201ENST00000363727 PBXIP1Q96AQ6 731 aa8.5□□□□□ -1.05
RNU1-87P-201ENST00000363727 CDV3Q9UKY7 258 aaKnown RBP8.5□□□□□ -1.05
RNU1-87P-201ENST00000363727 DOLKQ9UPQ8 538 aa8.5□□□□□ -1.05
RNU1-87P-201ENST00000363727 FSHRP23945 695 aa8.49□□□□□ -1.05
RNU1-87P-201ENST00000363727 RNF20Q5VTR2 975 aa8.49□□□□□ -1.05
RNU1-87P-201ENST00000363727 ZNF598Q86UK7 904 aaKnown RBP8.49□□□□□ -1.05
RNU1-87P-201ENST00000363727 CDCA7Q9BWT1 371 aaPredicted RBP8.49□□□□□ -1.05
RNU1-87P-201ENST00000363727 PCDHB11Q9Y5F2 797 aa8.49□□□□□ -1.05
RNU1-87P-201ENST00000363727 ESPNB1AK53 854 aa8.48□□□□□ -1.05
RNU1-87P-201ENST00000363727 SIAH2O43255 324 aa8.48□□□□□ -1.05
RNU1-87P-201ENST00000363727 INTS6LQ5JSJ4 861 aaKnown RBP8.48□□□□□ -1.05
RNU1-87P-201ENST00000363727 TNFRSF10AO00220 468 aa8.47□□□□□ -1.05
RNU1-87P-201ENST00000363727 PPP1R15AO75807 674 aaPredicted RBP8.47□□□□□ -1.05
RNU1-87P-201ENST00000363727 ALDH1A1P00352 501 aa8.47□□□□□ -1.05
RNU1-87P-201ENST00000363727 VRTNQ9H8Y1 702 aa8.47□□□□□ -1.05
RNU1-87P-201ENST00000363727 MAP4K5Q9Y4K4 846 aa8.47□□□□□ -1.05
RNU1-87P-201ENST00000363727 ACIN1Q9UKV3 1341 aaKnown RBP8.47□□□□□ -1.05
RNU1-87P-201ENST00000363727 GRM5P41594 1212 aa8.46□□□□□ -1.06
RNU1-87P-201ENST00000363727 SRPK2P78362 688 aaKnown RBP8.46□□□□□ -1.06
RNU1-87P-201ENST00000363727 EML3Q32P44 896 aa8.46□□□□□ -1.06
RNU1-87P-201ENST00000363727 MAP7D1Q3KQU3 841 aa8.46□□□□□ -1.06
RNU1-87P-201ENST00000363727 KANK4Q5T7N3 995 aaPredicted RBP8.46□□□□□ -1.06
RNU1-87P-201ENST00000363727 TRAF7Q6Q0C0 670 aa8.46□□□□□ -1.06
RNU1-87P-201ENST00000363727 PLEKHM2Q8IWE5 1019 aa8.46□□□□□ -1.06
RNU1-87P-201ENST00000363727 CDK15Q96Q40 435 aa8.46□□□□□ -1.06
RNU1-87P-201ENST00000363727 PKD2L1Q9P0L9 805 aa8.46□□□□□ -1.06
RNU1-87P-201ENST00000363727 MKRN1Q9UHC7 482 aaKnown RBP8.46□□□□□ -1.06
RNU1-87P-201ENST00000363727 V9GY48 417 aaPredicted RBP8.46□□□□□ -1.06
RNU1-87P-201ENST00000363727 ERVH48-1M5A8F1 160 aa8.45□□□□□ -1.06
RNU1-87P-201ENST00000363727 ADH1CP00326 375 aa8.45□□□□□ -1.06
RNU1-87P-201ENST00000363727 SEPT12Q8IYM1 358 aa8.45□□□□□ -1.06
RNU1-87P-201ENST00000363727 RETREG2Q8NC44 543 aa8.45□□□□□ -1.06
RNU1-87P-201ENST00000363727 TMPRSS4Q9NRS4 437 aa8.45□□□□□ -1.06
RNU1-87P-201ENST00000363727 CHIC2Q9UKJ5 165 aa8.45□□□□□ -1.06
RNU1-87P-201ENST00000363727 TTC24A2A3L6 582 aaPredicted RBP8.43□□□□□ -1.06
RNU1-87P-201ENST00000363727 NR3C2P08235 984 aa8.43□□□□□ -1.06
RNU1-87P-201ENST00000363727 RASA1P20936 1047 aa8.43□□□□□ -1.06
RNU1-87P-201ENST00000363727 CYLDQ9NQC7 956 aa8.43□□□□□ -1.06
RNU1-87P-201ENST00000363727 NOD1Q9Y239 953 aa8.43□□□□□ -1.06
RNU1-87P-201ENST00000363727 WASF2Q9Y6W5 498 aa8.43□□□□□ -1.06
RNU1-87P-201ENST00000363727 SCTRP47872 440 aa8.42□□□□□ -1.06
RNU1-87P-201ENST00000363727 CRTC2Q53ET0 693 aaPredicted RBP8.42□□□□□ -1.06
RNU1-87P-201ENST00000363727 CCDC116Q8IYX3 515 aa8.42□□□□□ -1.06
RNU1-87P-201ENST00000363727 CYP4X1Q8N118 509 aa8.42□□□□□ -1.06
RNU1-87P-201ENST00000363727 ZNF594Q96JF6 807 aaPredicted RBP8.42□□□□□ -1.06
RNU1-87P-201ENST00000363727 ESF1Q9H501 851 aaKnown RBP8.42□□□□□ -1.06
RNU1-87P-201ENST00000363727 CARNS1A5YM72 827 aa8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 J3QL48 77 aa8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 LZTS3O60299 673 aaPredicted RBP8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 GDF9O60383 454 aa8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 CSB-PGBD3P0DP91 1061 aa8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 PSME1Q06323 249 aa8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 NR5A1Q13285 461 aa8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 NNTQ13423 1086 aa8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 PPP1R26Q5T8A7 1209 aaPredicted RBP8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 LARP1Q6PKG0 1096 aaKnown RBP8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 OGFOD1Q8N543 542 aa8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 MPNDQ8N594 471 aa8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 SNIP1Q8TAD8 396 aaKnown RBP8.41□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP17L15C9J2P7 530 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP17L10C9JJH3 530 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP17L13C9JLJ4 530 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP17L12C9JPN9 530 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP17L11C9JVI0 530 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP17L21D6R901 530 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP17L18D6R9N7 530 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP17L22D6RA61 530 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP17L17D6RBQ6 530 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP17L19D6RCP7 530 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP17L20D6RJB6 530 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 ATP5J2-PTCD1G3V325 749 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 MYCP01106 439 aaPredicted RBP8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 GTF2IP78347 998 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 CLDN10P78369 228 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 DHX9Q08211 1270 aaKnown RBP8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP17L24Q0WX57 530 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 USP4Q13107 963 aa8.4□□□□□ -1.06
RNU1-87P-201ENST00000363727 ZNF784Q8NCA9 323 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms