RNA–Protein interactions for RNA: ENST00000363347.1

RNU6-839P-201, Transcript of RNA, U6 small nuclear 839, pseudogene, humanhuman

BASIC

Gene RNU6-839P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-839P-201ENST00000363347 NNTQ13423 1086 aa8.06□□□□□ -1.12
RNU6-839P-201ENST00000363347 WWC1Q8IX03 1113 aa8.06□□□□□ -1.12
RNU6-839P-201ENST00000363347 HELBQ8NG08 1087 aaPredicted RBP8.06□□□□□ -1.12
RNU6-839P-201ENST00000363347 TIMP2P16035 220 aa8.05□□□□□ -1.12
RNU6-839P-201ENST00000363347 CCDC97Q96F63 343 aaPredicted RBP8.05□□□□□ -1.12
RNU6-839P-201ENST00000363347 CFAP99D6REC4 459 aa8.04□□□□□ -1.12
RNU6-839P-201ENST00000363347 ADH1CP00326 375 aa8.04□□□□□ -1.12
RNU6-839P-201ENST00000363347 CTDSPL2Q05D32 466 aa8.04□□□□□ -1.12
RNU6-839P-201ENST00000363347 SYMPKQ92797 1274 aaKnown RBP8.04□□□□□ -1.12
RNU6-839P-201ENST00000363347 HMX1Q9NP08 348 aaPredicted RBP8.04□□□□□ -1.12
RNU6-839P-201ENST00000363347 NDUFB9Q9Y6M9 179 aa8.04□□□□□ -1.12
RNU6-839P-201ENST00000363347 MAN1A2O60476 641 aa8.03□□□□□ -1.12
RNU6-839P-201ENST00000363347 WDR4P57081 412 aaKnown RBP8.03□□□□□ -1.12
RNU6-839P-201ENST00000363347 GJD4Q96KN9 370 aaPredicted RBP8.03□□□□□ -1.12
RNU6-839P-201ENST00000363347 ADAMTS8Q9UP79 889 aa8.03□□□□□ -1.12
RNU6-839P-201ENST00000363347 PPFIA3O75145 1194 aa8.02□□□□□ -1.13
RNU6-839P-201ENST00000363347 GPAT2Q6NUI2 795 aa8.02□□□□□ -1.13
RNU6-839P-201ENST00000363347 LRRN4Q8WUT4 740 aa8.02□□□□□ -1.13
RNU6-839P-201ENST00000363347 SERPINA10Q9UK55 444 aa8.02□□□□□ -1.13
RNU6-839P-201ENST00000363347 IGHA1P01876 353 aa8.01□□□□□ -1.13
RNU6-839P-201ENST00000363347 RETREG3Q86VR2 466 aa8.01□□□□□ -1.13
RNU6-839P-201ENST00000363347 MPNDQ8N594 471 aa8.01□□□□□ -1.13
RNU6-839P-201ENST00000363347 POM121CA8CG34 1229 aa8□□□□□ -1.13
RNU6-839P-201ENST00000363347 CCNYL3P0C7X3 344 aa8□□□□□ -1.13
RNU6-839P-201ENST00000363347 PRR7Q8TB68 274 aa8□□□□□ -1.13
RNU6-839P-201ENST00000363347 TRIM34Q9BYJ4 488 aa8□□□□□ -1.13
RNU6-839P-201ENST00000363347 DNMT3AQ9Y6K1 912 aaPredicted RBP8□□□□□ -1.13
RNU6-839P-201ENST00000363347 VARSP26640 1264 aaKnown RBP7.99□□□□□ -1.13
RNU6-839P-201ENST00000363347 LINC01559Q495D7 138 aa7.99□□□□□ -1.13
RNU6-839P-201ENST00000363347 XP32Q5T750 250 aa7.99□□□□□ -1.13
RNU6-839P-201ENST00000363347 UNC93B1Q9H1C4 597 aa7.99□□□□□ -1.13
RNU6-839P-201ENST00000363347 KRT76Q01546 638 aa7.98□□□□□ -1.13
RNU6-839P-201ENST00000363347 IRF5Q13568 498 aa7.98□□□□□ -1.13
RNU6-839P-201ENST00000363347 GLMNQ92990 594 aa7.98□□□□□ -1.13
RNU6-839P-201ENST00000363347 KLF16Q9BXK1 252 aaPredicted RBP7.98□□□□□ -1.13
RNU6-839P-201ENST00000363347 GPR37L1O60883 481 aa7.97□□□□□ -1.13
RNU6-839P-201ENST00000363347 C6orf118Q5T5N4 469 aa7.97□□□□□ -1.13
RNU6-839P-201ENST00000363347 BAP1Q92560 729 aa7.97□□□□□ -1.13
RNU6-839P-201ENST00000363347 CALR3Q96L12 384 aaKnown RBP7.97□□□□□ -1.13
RNU6-839P-201ENST00000363347 CNTNAP3BQ96NU0 1288 aa7.97□□□□□ -1.13
RNU6-839P-201ENST00000363347 CNTNAP3Q9BZ76 1288 aa7.97□□□□□ -1.13
RNU6-839P-201ENST00000363347 PER1O15534 1290 aaPredicted RBP7.96□□□□□ -1.14
RNU6-839P-201ENST00000363347 ZNF511Q8NB15 262 aa7.96□□□□□ -1.14
RNU6-839P-201ENST00000363347 EPS8L1Q8TE68 723 aa7.96□□□□□ -1.14
RNU6-839P-201ENST00000363347 FOXK2Q01167 660 aa7.95□□□□□ -1.14
RNU6-839P-201ENST00000363347 SVOPQ8N4V2 548 aa7.95□□□□□ -1.14
RNU6-839P-201ENST00000363347 ZIC2O95409 532 aaPredicted RBP7.94□□□□□ -1.14
RNU6-839P-201ENST00000363347 IRS1P35568 1242 aa7.94□□□□□ -1.14
RNU6-839P-201ENST00000363347 VAC14Q08AM6 782 aa7.94□□□□□ -1.14
RNU6-839P-201ENST00000363347 NR6A1Q15406 480 aa7.94□□□□□ -1.14
RNU6-839P-201ENST00000363347 PTPRNQ16849 979 aa7.94□□□□□ -1.14
RNU6-839P-201ENST00000363347 WASHC4Q2M389 1173 aa7.94□□□□□ -1.14
RNU6-839P-201ENST00000363347 ZNF385CQ66K41 422 aaPredicted RBP7.94□□□□□ -1.14
RNU6-839P-201ENST00000363347 GPR161Q8N6U8 529 aaKnown RBP7.94□□□□□ -1.14
RNU6-839P-201ENST00000363347 ZFAND3Q9H8U3 227 aa7.93□□□□□ -1.14
RNU6-839P-201ENST00000363347 EVA1BQ9NVM1 165 aa7.93□□□□□ -1.14
RNU6-839P-201ENST00000363347 UPP2O95045 317 aa7.92□□□□□ -1.14
RNU6-839P-201ENST00000363347 BMP2P12643 396 aa7.92□□□□□ -1.14
RNU6-839P-201ENST00000363347 DESI1Q6ICB0 168 aa7.92□□□□□ -1.14
RNU6-839P-201ENST00000363347 KANK3Q6NY19 840 aa7.92□□□□□ -1.14
RNU6-839P-201ENST00000363347 ADAMTS19Q8TE59 1207 aa7.92□□□□□ -1.14
RNU6-839P-201ENST00000363347 ITPKCQ96DU7 683 aa7.92□□□□□ -1.14
RNU6-839P-201ENST00000363347 KCNH2Q12809 1159 aa7.91□□□□□ -1.14
RNU6-839P-201ENST00000363347 HDGFL1Q5TGJ6 251 aa7.91□□□□□ -1.14
RNU6-839P-201ENST00000363347 LINC00528Q8N1L1 170 aa7.91□□□□□ -1.14
RNU6-839P-201ENST00000363347 FAM174AQ8TBP5 190 aa7.91□□□□□ -1.14
RNU6-839P-201ENST00000363347 COL25A1Q9BXS0 654 aaPredicted RBP7.91□□□□□ -1.14
RNU6-839P-201ENST00000363347 DNMT3LQ9UJW3 386 aa7.91□□□□□ -1.14
RNU6-839P-201ENST00000363347 SOS2Q07890 1332 aaPredicted RBP7.9□□□□□ -1.14
RNU6-839P-201ENST00000363347 PDIA4P13667 645 aaKnown RBP7.9□□□□□ -1.14
RNU6-839P-201ENST00000363347 LYPD8Q6UX82 237 aa7.9□□□□□ -1.14
RNU6-839P-201ENST00000363347 CDK15Q96Q40 435 aa7.89□□□□□ -1.15
RNU6-839P-201ENST00000363347 ARID5BQ14865 1188 aa7.88□□□□□ -1.15
RNU6-839P-201ENST00000363347 MEIOBQ8N635 442 aa7.88□□□□□ -1.15
RNU6-839P-201ENST00000363347 PNMA1Q8ND90 353 aa7.88□□□□□ -1.15
RNU6-839P-201ENST00000363347 ARHGEF15O94989 841 aa7.87□□□□□ -1.15
RNU6-839P-201ENST00000363347 MARSP56192 900 aaKnown RBP7.87□□□□□ -1.15
RNU6-839P-201ENST00000363347 TRIM26Q12899 539 aaPredicted RBP7.87□□□□□ -1.15
RNU6-839P-201ENST00000363347 NR5A1Q13285 461 aa7.87□□□□□ -1.15
RNU6-839P-201ENST00000363347 RNFT1Q5M7Z0 435 aa7.87□□□□□ -1.15
RNU6-839P-201ENST00000363347 NR3C2P08235 984 aa7.86□□□□□ -1.15
RNU6-839P-201ENST00000363347 SLURP2P0DP57 97 aa7.86□□□□□ -1.15
RNU6-839P-201ENST00000363347 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.86□□□□□ -1.15
RNU6-839P-201ENST00000363347 WHAMMQ8TF30 809 aa7.86□□□□□ -1.15
RNU6-839P-201ENST00000363347 NANOS1Q8WY41 292 aaKnown RBP7.86□□□□□ -1.15
RNU6-839P-201ENST00000363347 SCARF2Q96GP6 870 aaPredicted RBP7.86□□□□□ -1.15
RNU6-839P-201ENST00000363347 KRTAP4-8Q9BYQ9 185 aa7.86□□□□□ -1.15
RNU6-839P-201ENST00000363347 PODXL2Q9NZ53 605 aa7.86□□□□□ -1.15
RNU6-839P-201ENST00000363347 MAP10Q9P2G4 905 aa7.86□□□□□ -1.15
RNU6-839P-201ENST00000363347 ADAM23O75077 832 aa7.85□□□□□ -1.15
RNU6-839P-201ENST00000363347 F12P00748 615 aaPredicted RBP7.85□□□□□ -1.15
RNU6-839P-201ENST00000363347 ALG2Q9H553 416 aa7.85□□□□□ -1.15
RNU6-839P-201ENST00000363347 RFX1P22670 979 aa7.84□□□□□ -1.15
RNU6-839P-201ENST00000363347 CTHP32929 405 aa7.84□□□□□ -1.15
RNU6-839P-201ENST00000363347 SOX11P35716 441 aa7.84□□□□□ -1.15
RNU6-839P-201ENST00000363347 PTSQ03393 145 aa7.84□□□□□ -1.15
RNU6-839P-201ENST00000363347 RETREG2Q8NC44 543 aa7.84□□□□□ -1.15
RNU6-839P-201ENST00000363347 FKBPLQ9UIM3 349 aa7.84□□□□□ -1.15
RNU6-839P-201ENST00000363347 PPP1R15AO75807 674 aaPredicted RBP7.83□□□□□ -1.16
RNU6-839P-201ENST00000363347 SEMA3FQ13275 785 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms