RNA–Protein interactions for RNA: ENST00000362839.1

RNU4-23P-201, Transcript of RNA, U4 small nuclear 23, pseudogene, humanhuman

BASIC

Gene RNU4-23P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-23P-201ENST00000362839 GZF1Q9H116 711 aaPredicted RBP10.81□□□□□ -0.68
RNU4-23P-201ENST00000362839 FAM196BA6NMK8 535 aa10.8□□□□□ -0.68
RNU4-23P-201ENST00000362839 PATL2C9JE40 543 aaKnown RBP10.8□□□□□ -0.68
RNU4-23P-201ENST00000362839 LZTS3O60299 673 aaPredicted RBP10.8□□□□□ -0.68
RNU4-23P-201ENST00000362839 MAP7D1Q3KQU3 841 aa10.8□□□□□ -0.68
RNU4-23P-201ENST00000362839 ERFEQ4G0M1 354 aa10.8□□□□□ -0.68
RNU4-23P-201ENST00000362839 TMEM164Q5U3C3 297 aa10.8□□□□□ -0.68
RNU4-23P-201ENST00000362839 TRAF7Q6Q0C0 670 aa10.8□□□□□ -0.68
RNU4-23P-201ENST00000362839 STK32AQ8WU08 396 aa10.8□□□□□ -0.68
RNU4-23P-201ENST00000362839 NOVA2Q9UNW9 492 aaKnown RBP10.8□□□□□ -0.68
RNU4-23P-201ENST00000362839 AGERQ15109 404 aa10.79□□□□□ -0.68
RNU4-23P-201ENST00000362839 CRTC2Q53ET0 693 aaPredicted RBP10.79□□□□□ -0.68
RNU4-23P-201ENST00000362839 USP17L15C9J2P7 530 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 USP17L10C9JJH3 530 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 USP17L13C9JLJ4 530 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 USP17L12C9JPN9 530 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 USP17L11C9JVI0 530 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 USP17L21D6R901 530 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 USP17L18D6R9N7 530 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 USP17L22D6RA61 530 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 USP17L17D6RBQ6 530 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 USP17L19D6RCP7 530 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 USP17L20D6RJB6 530 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 ATP5J2-PTCD1G3V325 749 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 RASA1P20936 1047 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 USP17L24Q0WX57 530 aa10.78□□□□□ -0.68
RNU4-23P-201ENST00000362839 PPEF1O14829 653 aaPredicted RBP10.77□□□□□ -0.69
RNU4-23P-201ENST00000362839 GIGYF1O75420 1035 aaPredicted RBP10.77□□□□□ -0.69
RNU4-23P-201ENST00000362839 PTK7Q13308 1070 aa10.77□□□□□ -0.69
RNU4-23P-201ENST00000362839 EML3Q32P44 896 aa10.77□□□□□ -0.69
RNU4-23P-201ENST00000362839 LARP1Q6PKG0 1096 aaKnown RBP10.77□□□□□ -0.69
RNU4-23P-201ENST00000362839 CCDC85AQ96PX6 553 aaPredicted RBP10.77□□□□□ -0.69
RNU4-23P-201ENST00000362839 SH3BP2P78314 561 aa10.76□□□□□ -0.69
RNU4-23P-201ENST00000362839 C1QTNF2Q9BXJ5 285 aa10.76□□□□□ -0.69
RNU4-23P-201ENST00000362839 DOLKQ9UPQ8 538 aa10.75□□□□□ -0.69
RNU4-23P-201ENST00000362839 KCNC4Q03721 635 aa10.74□□□□□ -0.69
RNU4-23P-201ENST00000362839 SLC10A4Q96EP9 437 aa10.74□□□□□ -0.69
RNU4-23P-201ENST00000362839 ITGBL1O95965 494 aaPredicted RBP10.73□□□□□ -0.69
RNU4-23P-201ENST00000362839 CLDN10P78369 228 aa10.73□□□□□ -0.69
RNU4-23P-201ENST00000362839 TMCO4Q5TGY1 634 aa10.73□□□□□ -0.69
RNU4-23P-201ENST00000362839 OGFOD1Q8N543 542 aa10.73□□□□□ -0.69
RNU4-23P-201ENST00000362839 RNF223E7ERA6 249 aa10.72□□□□□ -0.69
RNU4-23P-201ENST00000362839 RNF20Q5VTR2 975 aa10.72□□□□□ -0.69
RNU4-23P-201ENST00000362839 ANKMY2Q8IV38 441 aa10.72□□□□□ -0.69
RNU4-23P-201ENST00000362839 TRMT44Q8IYL2 757 aaKnown RBP10.72□□□□□ -0.69
RNU4-23P-201ENST00000362839 FAM200AQ8TCP9 573 aa10.72□□□□□ -0.69
RNU4-23P-201ENST00000362839 CDCA7Q9BWT1 371 aaPredicted RBP10.72□□□□□ -0.69
RNU4-23P-201ENST00000362839 NOD1Q9Y239 953 aa10.72□□□□□ -0.69
RNU4-23P-201ENST00000362839 ESPNB1AK53 854 aa10.71□□□□□ -0.69
RNU4-23P-201ENST00000362839 FAM69CQ0P6D2 419 aa10.71□□□□□ -0.69
RNU4-23P-201ENST00000362839 NBPF20Q3BBV1 942 aa10.71□□□□□ -0.69
RNU4-23P-201ENST00000362839 OXLD1Q5BKU9 147 aa10.71□□□□□ -0.69
RNU4-23P-201ENST00000362839 TRIM50Q86XT4 487 aa10.71□□□□□ -0.69
RNU4-23P-201ENST00000362839 HCSTQ9UBK5 93 aa10.71□□□□□ -0.69
RNU4-23P-201ENST00000362839 IVNS1ABPQ9Y6Y0 642 aa10.71□□□□□ -0.69
RNU4-23P-201ENST00000362839 ZBTB24O43167 697 aaPredicted RBP10.7□□□□□ -0.7
RNU4-23P-201ENST00000362839 PLA2G2CQ5R387 149 aa10.7□□□□□ -0.7
RNU4-23P-201ENST00000362839 B4GALNT3Q6L9W6 998 aa10.7□□□□□ -0.7
RNU4-23P-201ENST00000362839 ZNF594Q96JF6 807 aaPredicted RBP10.7□□□□□ -0.7
RNU4-23P-201ENST00000362839 DNAAF2Q9NVR5 837 aaKnown RBP10.7□□□□□ -0.7
RNU4-23P-201ENST00000362839 SLAIN2Q9P270 581 aa10.7□□□□□ -0.7
RNU4-23P-201ENST00000362839 ZBTB7BO15156 539 aaPredicted RBP10.69□□□□□ -0.7
RNU4-23P-201ENST00000362839 ATP1A2P50993 1020 aa10.69□□□□□ -0.7
RNU4-23P-201ENST00000362839 DPYDQ12882 1025 aa10.69□□□□□ -0.7
RNU4-23P-201ENST00000362839 TRIM32Q13049 653 aa10.69□□□□□ -0.7
RNU4-23P-201ENST00000362839 PHLDB3Q6NSJ2 640 aa10.69□□□□□ -0.7
RNU4-23P-201ENST00000362839 ANKLE1Q8NAG6 615 aa10.69□□□□□ -0.7
RNU4-23P-201ENST00000362839 CDV3Q9UKY7 258 aaKnown RBP10.69□□□□□ -0.7
RNU4-23P-201ENST00000362839 DKK1O94907 266 aa10.68□□□□□ -0.7
RNU4-23P-201ENST00000362839 LARGE2Q8N3Y3 721 aa10.68□□□□□ -0.7
RNU4-23P-201ENST00000362839 PCDH10Q9P2E7 1040 aa10.68□□□□□ -0.7
RNU4-23P-201ENST00000362839 KIAA1024Q9UPX6 916 aa10.68□□□□□ -0.7
RNU4-23P-201ENST00000362839 MFAP1P55081 439 aaKnown RBP10.67□□□□□ -0.7
RNU4-23P-201ENST00000362839 GTF2IP78347 998 aa10.67□□□□□ -0.7
RNU4-23P-201ENST00000362839 SKOR1P84550 965 aa10.67□□□□□ -0.7
RNU4-23P-201ENST00000362839 SEPT12Q8IYM1 358 aa10.67□□□□□ -0.7
RNU4-23P-201ENST00000362839 CLP1Q92989 425 aaKnown RBP10.67□□□□□ -0.7
RNU4-23P-201ENST00000362839 PCDHB11Q9Y5F2 797 aa10.67□□□□□ -0.7
RNU4-23P-201ENST00000362839 VARSP26640 1264 aaKnown RBP10.66□□□□□ -0.7
RNU4-23P-201ENST00000362839 SSFA2P28290 1259 aa10.66□□□□□ -0.7
RNU4-23P-201ENST00000362839 GGCXP38435 758 aa10.66□□□□□ -0.7
RNU4-23P-201ENST00000362839 SIX5Q8N196 739 aa10.66□□□□□ -0.7
RNU4-23P-201ENST00000362839 KCTD15Q96SI1 283 aaPredicted RBP10.66□□□□□ -0.7
RNU4-23P-201ENST00000362839 GNEQ9Y223 722 aaKnown RBP10.66□□□□□ -0.7
RNU4-23P-201ENST00000362839 WNT7BP56706 349 aa10.65□□□□□ -0.7
RNU4-23P-201ENST00000362839 NPM2Q86SE8 214 aaKnown RBP10.65□□□□□ -0.7
RNU4-23P-201ENST00000362839 CCDC125Q86Z20 511 aa10.65□□□□□ -0.7
RNU4-23P-201ENST00000362839 RNF166Q96A37 237 aaPredicted RBP10.65□□□□□ -0.7
RNU4-23P-201ENST00000362839 PCDHGA11Q9Y5H2 935 aa10.65□□□□□ -0.7
RNU4-23P-201ENST00000362839 USP4Q13107 963 aa10.64□□□□□ -0.71
RNU4-23P-201ENST00000362839 SWI5Q1ZZU3 235 aa10.64□□□□□ -0.71
RNU4-23P-201ENST00000362839 PPP1R18Q6NYC8 613 aa10.64□□□□□ -0.71
RNU4-23P-201ENST00000362839 RGS22Q8NE09 1264 aa10.64□□□□□ -0.71
RNU4-23P-201ENST00000362839 RAB15P59190 212 aa10.63□□□□□ -0.71
RNU4-23P-201ENST00000362839 CCDC102BQ68D86 513 aa10.63□□□□□ -0.71
RNU4-23P-201ENST00000362839 TXNDC2Q86VQ3 553 aa10.63□□□□□ -0.71
RNU4-23P-201ENST00000362839 SIRT1Q96EB6 747 aa10.63□□□□□ -0.71
RNU4-23P-201ENST00000362839 RPIAP49247 311 aa10.62□□□□□ -0.71
RNU4-23P-201ENST00000362839 SEC13P55735 322 aa10.62□□□□□ -0.71
RNU4-23P-201ENST00000362839 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms