RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 HMOX1P09601 288 aa30.55■■■□□ 2.48
SDF4-202ENST00000360001 RRP7AQ9Y3A4 280 aaKnown RBP30.55■■■□□ 2.48
SDF4-202ENST00000360001 PHRF1Q9P1Y6 1649 aaKnown RBP30.55■■■□□ 2.48
SDF4-202ENST00000360001 MED1Q15648 1581 aaPredicted RBP30.55■■■□□ 2.48
SDF4-202ENST00000360001 SPATA31A3Q5VYP0 1347 aa30.54■■■□□ 2.48
SDF4-202ENST00000360001 NCBP3Q53F19 620 aaKnown RBP30.54■■■□□ 2.48
SDF4-202ENST00000360001 PRKAR2BP31323 418 aa30.54■■■□□ 2.48
SDF4-202ENST00000360001 PHF23Q9BUL5 403 aaPredicted RBP30.54■■■□□ 2.48
SDF4-202ENST00000360001 MAPK8IP3Q9UPT6 1336 aa30.53■■■□□ 2.48
SDF4-202ENST00000360001 SOS2Q07890 1332 aaPredicted RBP30.53■■■□□ 2.48
SDF4-202ENST00000360001 NEUROD2Q15784 382 aa30.52■■■□□ 2.48
SDF4-202ENST00000360001 WWC1Q8IX03 1113 aa30.52■■■□□ 2.48
SDF4-202ENST00000360001 NHSL1Q5SYE7 1610 aa30.51■■■□□ 2.48
SDF4-202ENST00000360001 GOLGA2Q08379 1002 aa30.51■■■□□ 2.47
SDF4-202ENST00000360001 CCDC27Q2M243 656 aa30.5■■■□□ 2.47
SDF4-202ENST00000360001 PLEKHG5O94827 1062 aa30.5■■■□□ 2.47
SDF4-202ENST00000360001 IP6K1Q92551 441 aa30.5■■■□□ 2.47
SDF4-202ENST00000360001 ARHGEF10O15013 1369 aa30.49■■■□□ 2.47
SDF4-202ENST00000360001 TMPOP42166 694 aaKnown RBP30.49■■■□□ 2.47
SDF4-202ENST00000360001 ARHGEF25Q86VW2 580 aa30.49■■■□□ 2.47
SDF4-202ENST00000360001 CRYBG1Q9Y4K1 1723 aa30.48■■■□□ 2.47
SDF4-202ENST00000360001 SUPT16HQ9Y5B9 1047 aaKnown RBP30.47■■■□□ 2.47
SDF4-202ENST00000360001 SULT6B1Q6IMI4 303 aa30.46■■■□□ 2.47
SDF4-202ENST00000360001 AEBP1Q8IUX7 1158 aa30.46■■■□□ 2.47
SDF4-202ENST00000360001 PHACTR3Q96KR7 559 aa30.46■■■□□ 2.47
SDF4-202ENST00000360001 SLFN5Q08AF3 891 aa30.45■■■□□ 2.47
SDF4-202ENST00000360001 IGSF1Q8N6C5 1336 aa30.45■■■□□ 2.46
SDF4-202ENST00000360001 NEFMP07197 916 aa30.44■■■□□ 2.46
SDF4-202ENST00000360001 SPINK5Q9NQ38 1064 aaPredicted RBP30.44■■■□□ 2.46
SDF4-202ENST00000360001 DUSP27Q5VZP5 1158 aa30.43■■■□□ 2.46
SDF4-202ENST00000360001 EYA1Q99502 592 aa30.43■■■□□ 2.46
SDF4-202ENST00000360001 TRMT2AQ8IZ69 625 aaKnown RBP30.43■■■□□ 2.46
SDF4-202ENST00000360001 ZBTB7CA1YPR0 619 aa30.42■■■□□ 2.46
SDF4-202ENST00000360001 AEBP2Q6ZN18 517 aaPredicted RBP30.42■■■□□ 2.46
SDF4-202ENST00000360001 ROBO1Q9Y6N7 1651 aa30.42■■■□□ 2.46
SDF4-202ENST00000360001 KDRP35968 1356 aa30.42■■■□□ 2.46
SDF4-202ENST00000360001 TRIM35Q9UPQ4 493 aa30.41■■■□□ 2.46
SDF4-202ENST00000360001 WDR63Q8IWG1 891 aa30.41■■■□□ 2.46
SDF4-202ENST00000360001 E9PSI1 815 aa30.4■■■□□ 2.46
SDF4-202ENST00000360001 RIPK4P57078 832 aa30.4■■■□□ 2.46
SDF4-202ENST00000360001 CABLES1Q8TDN4 633 aa30.4■■■□□ 2.46
SDF4-202ENST00000360001 NFE2L2Q16236 605 aa30.39■■■□□ 2.46
SDF4-202ENST00000360001 LTV1Q96GA3 475 aaPredicted RBP30.39■■■□□ 2.46
SDF4-202ENST00000360001 ZC3H6P61129 1189 aaKnown RBP30.38■■■□□ 2.45
SDF4-202ENST00000360001 AXIN2Q9Y2T1 843 aa30.34■■■□□ 2.45
SDF4-202ENST00000360001 AHDC1Q5TGY3 1603 aaPredicted RBP30.34■■■□□ 2.45
SDF4-202ENST00000360001 DLG5Q8TDM6 1919 aa30.33■■■□□ 2.45
SDF4-202ENST00000360001 COL18A1P39060 1754 aa30.33■■■□□ 2.45
SDF4-202ENST00000360001 RGPD5Q99666 1765 aa30.33■■■□□ 2.45
SDF4-202ENST00000360001 RCAN3Q9UKA8 241 aa30.32■■■□□ 2.44
SDF4-202ENST00000360001 CPDO75976 1380 aa30.31■■■□□ 2.44
SDF4-202ENST00000360001 ABCA3Q99758 1704 aa30.31■■■□□ 2.44
SDF4-202ENST00000360001 RGPD2P0DJD1 1756 aa30.31■■■□□ 2.44
SDF4-202ENST00000360001 NEFLP07196 543 aa30.3■■■□□ 2.44
SDF4-202ENST00000360001 RNF123Q5XPI4 1314 aa30.3■■■□□ 2.44
SDF4-202ENST00000360001 ABCC6O95255 1503 aa30.3■■■□□ 2.44
SDF4-202ENST00000360001 NBPF6Q5VWK0 638 aa30.29■■■□□ 2.44
SDF4-202ENST00000360001 ANKRD24Q8TF21 1146 aa30.29■■■□□ 2.44
SDF4-202ENST00000360001 NBPF4Q96M43 638 aa30.29■■■□□ 2.44
SDF4-202ENST00000360001 KIAA0232Q92628 1395 aa30.28■■■□□ 2.44
SDF4-202ENST00000360001 IL16Q14005 1332 aa30.27■■■□□ 2.44
SDF4-202ENST00000360001 FKBP8Q14318 412 aa30.27■■■□□ 2.44
SDF4-202ENST00000360001 USHBP1Q8N6Y0 703 aa30.26■■■□□ 2.44
SDF4-202ENST00000360001 LRRC59Q96AG4 307 aaKnown RBP30.26■■■□□ 2.44
SDF4-202ENST00000360001 NCAPD2Q15021 1401 aa30.26■■■□□ 2.43
SDF4-202ENST00000360001 CAMTA1Q9Y6Y1 1673 aa30.26■■■□□ 2.43
SDF4-202ENST00000360001 ERBB3P21860 1342 aa30.25■■■□□ 2.43
SDF4-202ENST00000360001 TOM1O60784 492 aa30.24■■■□□ 2.43
SDF4-202ENST00000360001 LMOD3Q0VAK6 560 aa30.24■■■□□ 2.43
SDF4-202ENST00000360001 CHRNA2Q15822 529 aa30.23■■■□□ 2.43
SDF4-202ENST00000360001 MYH16Q9H6N6 1097 aa30.23■■■□□ 2.43
SDF4-202ENST00000360001 MTHFSDQ2M296 383 aaKnown RBP30.22■■■□□ 2.43
SDF4-202ENST00000360001 LMO7Q8WWI1 1683 aa30.21■■■□□ 2.43
SDF4-202ENST00000360001 THUMPD2Q9BTF0 503 aaKnown RBP30.2■■■□□ 2.43
SDF4-202ENST00000360001 FAM83GA6ND36 823 aa30.19■■■□□ 2.42
SDF4-202ENST00000360001 IRX6P78412 446 aaPredicted RBP30.19■■■□□ 2.42
SDF4-202ENST00000360001 PHLPP1O60346 1717 aa30.18■■■□□ 2.42
SDF4-202ENST00000360001 HAP1P54257 671 aaPredicted RBP30.18■■■□□ 2.42
SDF4-202ENST00000360001 FANCIQ9NVI1 1328 aa30.18■■■□□ 2.42
SDF4-202ENST00000360001 GAS2L2Q8NHY3 880 aa30.17■■■□□ 2.42
SDF4-202ENST00000360001 COL22A1Q8NFW1 1626 aaPredicted RBP30.17■■■□□ 2.42
SDF4-202ENST00000360001 CALD1Q05682 793 aaKnown RBP30.17■■■□□ 2.42
SDF4-202ENST00000360001 PRDM11Q9NQV5 511 aa30.17■■■□□ 2.42
SDF4-202ENST00000360001 COL16A1Q07092 1604 aaPredicted RBP30.16■■■□□ 2.42
SDF4-202ENST00000360001 TSR2Q969E8 191 aaKnown RBP30.16■■■□□ 2.42
SDF4-202ENST00000360001 FAM208AQ9UK61 1670 aaKnown RBP30.16■■■□□ 2.42
SDF4-202ENST00000360001 RRP1P56182 461 aaKnown RBP30.15■■■□□ 2.42
SDF4-202ENST00000360001 PIP4K2BP78356 416 aa30.15■■■□□ 2.42
SDF4-202ENST00000360001 DCTN1Q14203 1278 aa30.15■■■□□ 2.42
SDF4-202ENST00000360001 UBAP1LF5GYI3 381 aa30.13■■■□□ 2.41
SDF4-202ENST00000360001 IFT57Q9NWB7 429 aa30.12■■■□□ 2.41
SDF4-202ENST00000360001 ZNF853P0CG23 659 aa30.11■■■□□ 2.41
SDF4-202ENST00000360001 MCM10Q7L590 875 aa30.1■■■□□ 2.41
SDF4-202ENST00000360001 NLRP2Q9NX02 1062 aa30.1■■■□□ 2.41
SDF4-202ENST00000360001 CSB-PGBD3P0DP91 1061 aa30.08■■■□□ 2.41
SDF4-202ENST00000360001 GNAI1P63096 354 aa30.08■■■□□ 2.41
SDF4-202ENST00000360001 CFAP44Q96MT7 982 aa30.08■■■□□ 2.41
SDF4-202ENST00000360001 LAS1LQ9Y4W2 734 aaKnown RBP30.08■■■□□ 2.41
SDF4-202ENST00000360001 COL5A2P05997 1499 aaPredicted RBP30.07■■■□□ 2.4
SDF4-202ENST00000360001 HTATSF1O43719 755 aaKnown RBP30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms