RNA–Protein interactions for RNA: ENST00000359079.8

SGMS2-201, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-201ENST00000359079 DCTN4Q9UJW0 460 aa6.48□□□□□ -1.37
SGMS2-201ENST00000359079 DKK1O94907 266 aa6.47□□□□□ -1.37
SGMS2-201ENST00000359079 SLFNL1Q499Z3 407 aa6.47□□□□□ -1.37
SGMS2-201ENST00000359079 ARSIQ5FYB1 569 aa6.47□□□□□ -1.37
SGMS2-201ENST00000359079 TAS1R3Q7RTX0 852 aa6.47□□□□□ -1.37
SGMS2-201ENST00000359079 PACS2Q86VP3 889 aa6.47□□□□□ -1.37
SGMS2-201ENST00000359079 GTF3C2Q8WUA4 911 aaPredicted RBP6.47□□□□□ -1.37
SGMS2-201ENST00000359079 MKNK1Q9BUB5 465 aa6.47□□□□□ -1.37
SGMS2-201ENST00000359079 RNF19AQ9NV58 838 aa6.47□□□□□ -1.37
SGMS2-201ENST00000359079 EGFL7Q9UHF1 273 aa6.47□□□□□ -1.37
SGMS2-201ENST00000359079 DNMT3AQ9Y6K1 912 aaPredicted RBP6.47□□□□□ -1.37
SGMS2-201ENST00000359079 ZC3H4Q9UPT8 1303 aaKnown RBP6.47□□□□□ -1.37
SGMS2-201ENST00000359079 SWT1Q5T5J6 900 aaKnown RBP6.47□□□□□ -1.37
SGMS2-201ENST00000359079 RNF135Q8IUD6 432 aa6.47□□□□□ -1.37
SGMS2-201ENST00000359079 PHTF2Q8N3S3 785 aa6.47□□□□□ -1.37
SGMS2-201ENST00000359079 GAS2L2Q8NHY3 880 aa6.47□□□□□ -1.37
SGMS2-201ENST00000359079 CXXC1Q9P0U4 656 aaPredicted RBP6.47□□□□□ -1.37
SGMS2-201ENST00000359079 SCAMP3O14828 347 aaKnown RBP6.46□□□□□ -1.38
SGMS2-201ENST00000359079 C21orf2O43822 256 aa6.46□□□□□ -1.38
SGMS2-201ENST00000359079 FKBPLQ9UIM3 349 aa6.46□□□□□ -1.38
SGMS2-201ENST00000359079 ZBTB7BO15156 539 aaPredicted RBP6.45□□□□□ -1.38
SGMS2-201ENST00000359079 P4HBP07237 508 aaKnown RBP6.45□□□□□ -1.38
SGMS2-201ENST00000359079 NT5DC4Q86YG4 428 aa6.45□□□□□ -1.38
SGMS2-201ENST00000359079 DNAAF2Q9NVR5 837 aaKnown RBP6.45□□□□□ -1.38
SGMS2-201ENST00000359079 METTL16Q86W50 562 aaKnown RBP6.45□□□□□ -1.38
SGMS2-201ENST00000359079 ZSCAN29Q8IWY8 852 aaPredicted RBP6.45□□□□□ -1.38
SGMS2-201ENST00000359079 MAP10Q9P2G4 905 aa6.45□□□□□ -1.38
SGMS2-201ENST00000359079 ARID4BQ4LE39 1312 aaPredicted RBP6.45□□□□□ -1.38
SGMS2-201ENST00000359079 SFI1A8K8P3 1242 aa6.44□□□□□ -1.38
SGMS2-201ENST00000359079 LZTS3O60299 673 aaPredicted RBP6.44□□□□□ -1.38
SGMS2-201ENST00000359079 DOK7Q18PE1 504 aa6.44□□□□□ -1.38
SGMS2-201ENST00000359079 TRAF7Q6Q0C0 670 aa6.44□□□□□ -1.38
SGMS2-201ENST00000359079 LYPD8Q6UX82 237 aa6.44□□□□□ -1.38
SGMS2-201ENST00000359079 CERS3Q8IU89 383 aa6.44□□□□□ -1.38
SGMS2-201ENST00000359079 TMEM87AQ8NBN3 555 aa6.44□□□□□ -1.38
SGMS2-201ENST00000359079 FAM163AQ96GL9 167 aaPredicted RBP6.44□□□□□ -1.38
SGMS2-201ENST00000359079 BCL2L12Q9HB09 334 aa6.44□□□□□ -1.38
SGMS2-201ENST00000359079 PRKAG2Q9UGJ0 569 aa6.44□□□□□ -1.38
SGMS2-201ENST00000359079 IQSEC3Q9UPP2 1182 aaPredicted RBP6.44□□□□□ -1.38
SGMS2-201ENST00000359079 SBNO2Q9Y2G9 1366 aa6.44□□□□□ -1.38
SGMS2-201ENST00000359079 GTF2F1P35269 517 aaKnown RBP eCLIP6.43□□□□□ -1.38
SGMS2-201ENST00000359079 EML3Q32P44 896 aa6.43□□□□□ -1.38
SGMS2-201ENST00000359079 PURBQ96QR8 312 aaKnown RBP6.43□□□□□ -1.38
SGMS2-201ENST00000359079 TINF2Q9BSI4 451 aa6.43□□□□□ -1.38
SGMS2-201ENST00000359079 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.43□□□□□ -1.38
SGMS2-201ENST00000359079 TNNI2P48788 182 aa6.43□□□□□ -1.38
SGMS2-201ENST00000359079 FKBP4Q02790 459 aaKnown RBP eCLIP6.43□□□□□ -1.38
SGMS2-201ENST00000359079 CCDC144BQ3MJ40 725 aa6.43□□□□□ -1.38
SGMS2-201ENST00000359079 RETREG3Q86VR2 466 aa6.43□□□□□ -1.38
SGMS2-201ENST00000359079 RGL4Q8IZJ4 473 aa6.43□□□□□ -1.38
SGMS2-201ENST00000359079 OCSTAMPQ9BR26 566 aa6.43□□□□□ -1.38
SGMS2-201ENST00000359079 LHX6Q9UPM6 363 aa6.43□□□□□ -1.38
SGMS2-201ENST00000359079 MARCH6O60337 910 aa6.42□□□□□ -1.38
SGMS2-201ENST00000359079 FMNL1O95466 1100 aaPredicted RBP6.42□□□□□ -1.38
SGMS2-201ENST00000359079 PTPREP23469 700 aa6.42□□□□□ -1.38
SGMS2-201ENST00000359079 ATP6V1AP38606 617 aa6.42□□□□□ -1.38
SGMS2-201ENST00000359079 PUS10Q3MIT2 529 aaKnown RBP6.42□□□□□ -1.38
SGMS2-201ENST00000359079 GRIPAP1Q4V328 841 aa6.42□□□□□ -1.38
SGMS2-201ENST00000359079 PCDHB9Q9Y5E1 797 aa6.42□□□□□ -1.38
SGMS2-201ENST00000359079 RIMBP2O15034 1052 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 SEC13P55735 322 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 NAA30Q147X3 362 aaPredicted RBP6.41□□□□□ -1.38
SGMS2-201ENST00000359079 DESI1Q6ICB0 168 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 TMC7Q7Z402 723 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 ACBD3Q9H3P7 528 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 CAPN10Q9HC96 672 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 CFHP08603 1231 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 HOXB3P14651 431 aaPredicted RBP6.41□□□□□ -1.38
SGMS2-201ENST00000359079 NOP9Q86U38 636 aaKnown RBP6.41□□□□□ -1.38
SGMS2-201ENST00000359079 LARGE2Q8N3Y3 721 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 GPATCH3Q96I76 525 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 HINFPQ9BQA5 517 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 PIF1Q9H611 641 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 KIAA1468Q9P260 1216 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 CHIC2Q9UKJ5 165 aa6.41□□□□□ -1.38
SGMS2-201ENST00000359079 TLDC2A0PJX2 215 aa6.4□□□□□ -1.39
SGMS2-201ENST00000359079 COL19A1Q14993 1142 aa6.4□□□□□ -1.39
SGMS2-201ENST00000359079 CCDC102BQ68D86 513 aa6.4□□□□□ -1.39
SGMS2-201ENST00000359079 NOL8Q76FK4 1167 aaKnown RBP6.4□□□□□ -1.39
SGMS2-201ENST00000359079 SIX5Q8N196 739 aa6.4□□□□□ -1.39
SGMS2-201ENST00000359079 PARP2Q9UGN5 583 aa6.4□□□□□ -1.39
SGMS2-201ENST00000359079 SLC27A5Q9Y2P5 690 aa6.4□□□□□ -1.39
SGMS2-201ENST00000359079 RAB11FIP3O75154 756 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 F12P00748 615 aaPredicted RBP6.39□□□□□ -1.39
SGMS2-201ENST00000359079 ATP2B1P20020 1258 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 ATP1A2P50993 1020 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 FKBP5Q13451 457 aaPredicted RBP6.39□□□□□ -1.39
SGMS2-201ENST00000359079 TPCN2Q8NHX9 752 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 PMFBP1Q8TBY8 1022 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 SEPT9Q9UHD8 586 aaPredicted RBP6.39□□□□□ -1.39
SGMS2-201ENST00000359079 NOD1Q9Y239 953 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 ST18O60284 1047 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 BRD2P25440 801 aaKnown RBP6.39□□□□□ -1.39
SGMS2-201ENST00000359079 DNAJA1P31689 397 aaKnown RBP6.39□□□□□ -1.39
SGMS2-201ENST00000359079 GTF2IP78347 998 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 FANCCQ00597 558 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 OXLD1Q5BKU9 147 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 PPP4R3BQ5MIZ7 849 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 RNF19BQ6ZMZ0 732 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 TRIM50Q86XT4 487 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms