RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 POLKQ9UBT6 870 aa20.61■□□□□ 0.89
TPM1-206ENST00000358278 PPP2R1AP30153 589 aa20.6■□□□□ 0.89
TPM1-206ENST00000358278 FLT4P35916 1363 aa20.6■□□□□ 0.89
TPM1-206ENST00000358278 KIF24Q5T7B8 1368 aa20.6■□□□□ 0.89
TPM1-206ENST00000358278 C8orf37Q96NL8 207 aa20.59■□□□□ 0.89
TPM1-206ENST00000358278 CDK12Q9NYV4 1490 aaPredicted RBP20.59■□□□□ 0.89
TPM1-206ENST00000358278 MYBBP1AQ9BQG0 1328 aaKnown RBP20.59■□□□□ 0.89
TPM1-206ENST00000358278 NRAPQ86VF7 1730 aa20.59■□□□□ 0.89
TPM1-206ENST00000358278 FAM83GA6ND36 823 aa20.58■□□□□ 0.89
TPM1-206ENST00000358278 MTHFSP49914 203 aa20.58■□□□□ 0.88
TPM1-206ENST00000358278 FAM208AQ9UK61 1670 aaKnown RBP20.58■□□□□ 0.88
TPM1-206ENST00000358278 CAMTA1Q9Y6Y1 1673 aa20.56■□□□□ 0.88
TPM1-206ENST00000358278 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.56■□□□□ 0.88
TPM1-206ENST00000358278 HOXC9P31274 260 aa20.56■□□□□ 0.88
TPM1-206ENST00000358278 NGLY1Q96IV0 654 aa20.56■□□□□ 0.88
TPM1-206ENST00000358278 BLMP54132 1417 aaPredicted RBP20.56■□□□□ 0.88
TPM1-206ENST00000358278 RGPD2P0DJD1 1756 aa20.56■□□□□ 0.88
TPM1-206ENST00000358278 IP6K1Q92551 441 aa20.56■□□□□ 0.88
TPM1-206ENST00000358278 SLIT2O94813 1529 aa20.54■□□□□ 0.88
TPM1-206ENST00000358278 BTG4Q9NY30 223 aa20.54■□□□□ 0.88
TPM1-206ENST00000358278 AXIN2Q9Y2T1 843 aa20.53■□□□□ 0.88
TPM1-206ENST00000358278 COL5A2P05997 1499 aaPredicted RBP20.53■□□□□ 0.88
TPM1-206ENST00000358278 INSRP06213 1382 aa20.53■□□□□ 0.88
TPM1-206ENST00000358278 HSP90AB2PQ58FF8 381 aa20.53■□□□□ 0.88
TPM1-206ENST00000358278 CFAP53Q96M91 514 aa20.52■□□□□ 0.88
TPM1-206ENST00000358278 AFF2P51816 1311 aa20.51■□□□□ 0.87
TPM1-206ENST00000358278 LTV1Q96GA3 475 aaPredicted RBP20.5■□□□□ 0.87
TPM1-206ENST00000358278 ERBB3P21860 1342 aa20.5■□□□□ 0.87
TPM1-206ENST00000358278 COL3A1P02461 1466 aaPredicted RBP20.5■□□□□ 0.87
TPM1-206ENST00000358278 EVA1CP58658 441 aa20.5■□□□□ 0.87
TPM1-206ENST00000358278 STRN4Q9NRL3 753 aa20.5■□□□□ 0.87
TPM1-206ENST00000358278 CSB-PGBD3P0DP91 1061 aa20.49■□□□□ 0.87
TPM1-206ENST00000358278 FNBP4Q8N3X1 1017 aaPredicted RBP20.49■□□□□ 0.87
TPM1-206ENST00000358278 ANKRD24Q8TF21 1146 aa20.49■□□□□ 0.87
TPM1-206ENST00000358278 USP21Q9UK80 565 aa20.48■□□□□ 0.87
TPM1-206ENST00000358278 BCL9LQ86UU0 1499 aa20.48■□□□□ 0.87
TPM1-206ENST00000358278 UNC5CLQ8IV45 518 aa20.47■□□□□ 0.87
TPM1-206ENST00000358278 WDR17Q8IZU2 1322 aa20.46■□□□□ 0.87
TPM1-206ENST00000358278 RGPD1P0DJD0 1748 aa20.46■□□□□ 0.87
TPM1-206ENST00000358278 DIAPH1O60610 1272 aaKnown RBP20.46■□□□□ 0.87
TPM1-206ENST00000358278 EIF4A2Q14240 407 aaKnown RBP20.45■□□□□ 0.86
TPM1-206ENST00000358278 WNK3Q9BYP7 1800 aa20.45■□□□□ 0.86
TPM1-206ENST00000358278 LARP1Q6PKG0 1096 aaKnown RBP20.44■□□□□ 0.86
TPM1-206ENST00000358278 TOM1L2Q6ZVM7 507 aa20.44■□□□□ 0.86
TPM1-206ENST00000358278 MIER1Q8N108 512 aa20.44■□□□□ 0.86
TPM1-206ENST00000358278 CRB1P82279 1406 aa20.44■□□□□ 0.86
TPM1-206ENST00000358278 NLRP2Q9NX02 1062 aa20.43■□□□□ 0.86
TPM1-206ENST00000358278 CCDC9Q9Y3X0 531 aaKnown RBP20.43■□□□□ 0.86
TPM1-206ENST00000358278 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
TPM1-206ENST00000358278 IL13P35225 146 aa20.41■□□□□ 0.86
TPM1-206ENST00000358278 ZNF772Q68DY9 489 aaPredicted RBP20.41■□□□□ 0.86
TPM1-206ENST00000358278 NUDCQ9Y266 331 aa20.41■□□□□ 0.86
TPM1-206ENST00000358278 U2SURPO15042 1029 aaKnown RBP20.4■□□□□ 0.86
TPM1-206ENST00000358278 CCDC184Q52MB2 194 aa20.4■□□□□ 0.86
TPM1-206ENST00000358278 ATRNO75882 1429 aa20.4■□□□□ 0.86
TPM1-206ENST00000358278 VPS72Q15906 364 aa20.39■□□□□ 0.86
TPM1-206ENST00000358278 USP35Q9P2H5 1018 aa20.39■□□□□ 0.86
TPM1-206ENST00000358278 TRPC5Q9UL62 973 aaPredicted RBP20.39■□□□□ 0.86
TPM1-206ENST00000358278 NBPF6Q5VWK0 638 aa20.39■□□□□ 0.85
TPM1-206ENST00000358278 NBPF4Q96M43 638 aa20.39■□□□□ 0.85
TPM1-206ENST00000358278 EYA1Q99502 592 aa20.39■□□□□ 0.85
TPM1-206ENST00000358278 PARP4Q9UKK3 1724 aaKnown RBP20.38■□□□□ 0.85
TPM1-206ENST00000358278 CCER2I3L3R5 266 aa20.37■□□□□ 0.85
TPM1-206ENST00000358278 USHBP1Q8N6Y0 703 aa20.37■□□□□ 0.85
TPM1-206ENST00000358278 CARD10Q9BWT7 1032 aa20.37■□□□□ 0.85
TPM1-206ENST00000358278 SPATA31A5Q5VU36 1347 aa20.37■□□□□ 0.85
TPM1-206ENST00000358278 SPATA31A7Q8IWB4 1347 aa20.37■□□□□ 0.85
TPM1-206ENST00000358278 IGSF1Q8N6C5 1336 aa20.37■□□□□ 0.85
TPM1-206ENST00000358278 GLI3P10071 1580 aa20.37■□□□□ 0.85
TPM1-206ENST00000358278 WDR43Q15061 677 aaKnown RBP eCLIP20.36■□□□□ 0.85
TPM1-206ENST00000358278 QTRT2Q9H974 415 aaKnown RBP20.36■□□□□ 0.85
TPM1-206ENST00000358278 SPATA31A1Q5TZJ5 1347 aa20.36■□□□□ 0.85
TPM1-206ENST00000358278 NCAPD2Q15021 1401 aa20.35■□□□□ 0.85
TPM1-206ENST00000358278 U2AF1L5P0DN76 240 aaPredicted RBP20.35■□□□□ 0.85
TPM1-206ENST00000358278 U2AF1Q01081 240 aaKnown RBP eCLIP20.35■□□□□ 0.856e-9■■■■□ 21.7
TPM1-206ENST00000358278 TCP11L2Q8N4U5 519 aa20.34■□□□□ 0.85
TPM1-206ENST00000358278 HMOX1P09601 288 aa20.33■□□□□ 0.85
TPM1-206ENST00000358278 SULT6B1Q6IMI4 303 aa20.33■□□□□ 0.85
TPM1-206ENST00000358278 GJD4Q96KN9 370 aaPredicted RBP20.33■□□□□ 0.85
TPM1-206ENST00000358278 THRAP3Q9Y2W1 955 aaKnown RBP20.33■□□□□ 0.84
TPM1-206ENST00000358278 AEBP1Q8IUX7 1158 aa20.32■□□□□ 0.84
TPM1-206ENST00000358278 RGS17Q9UGC6 210 aaPredicted RBP20.32■□□□□ 0.84
TPM1-206ENST00000358278 KDRP35968 1356 aa20.31■□□□□ 0.84
TPM1-206ENST00000358278 RAPGEF4Q8WZA2 1011 aa20.3■□□□□ 0.84
TPM1-206ENST00000358278 THSD7AQ9UPZ6 1657 aa20.3■□□□□ 0.84
TPM1-206ENST00000358278 FAM98CQ17RN3 349 aaKnown RBP20.3■□□□□ 0.84
TPM1-206ENST00000358278 PKD1L3Q7Z443 1732 aa20.3■□□□□ 0.84
TPM1-206ENST00000358278 MEGF6O75095 1541 aa20.29■□□□□ 0.84
TPM1-206ENST00000358278 LRRC37A3O60309 1634 aa20.29■□□□□ 0.84
TPM1-206ENST00000358278 IL2RBP14784 551 aa20.29■□□□□ 0.84
TPM1-206ENST00000358278 A0A0G2JS52 829 aa20.28■□□□□ 0.84
TPM1-206ENST00000358278 RBM6P78332 1123 aaKnown RBP20.28■□□□□ 0.84
TPM1-206ENST00000358278 MYT1Q01538 1121 aa20.28■□□□□ 0.84
TPM1-206ENST00000358278 BARGINQ6ZT62 677 aa20.28■□□□□ 0.84
TPM1-206ENST00000358278 PNISRQ8TF01 805 aaKnown RBP20.28■□□□□ 0.84
TPM1-206ENST00000358278 DISP2A7MBM2 1401 aa20.28■□□□□ 0.84
TPM1-206ENST00000358278 SHANK3Q9BYB0 1731 aa20.27■□□□□ 0.84
TPM1-206ENST00000358278 BRWD3Q6RI45 1802 aa20.27■□□□□ 0.84
TPM1-206ENST00000358278 FCHSD2O94868 740 aa20.27■□□□□ 0.83
TPM1-206ENST00000358278 TATP17735 454 aaPredicted RBP20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms