RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 DIAPH1O60610 1272 aaKnown RBP4.89□□□□□ -1.63
SYNE2-204ENST00000358025 GNAI2P04899 355 aa4.89□□□□□ -1.63
SYNE2-204ENST00000358025 ABCC5O15440 1437 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 IQSEC3Q9UPP2 1182 aaPredicted RBP4.88□□□□□ -1.63
SYNE2-204ENST00000358025 ANO10Q9NW15 660 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 PIBF1Q8WXW3 757 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 ARID3AQ99856 593 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 OS9Q13438 667 aaPredicted RBP4.88□□□□□ -1.63
SYNE2-204ENST00000358025 CNTROBQ8N137 903 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 ZBTB40Q9NUA8 1239 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 SMTNL1A8MU46 457 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 DACH1Q9UI36 760 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 CLGNO14967 610 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 SDF4Q9BRK5 362 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 FOXD1Q16676 465 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.88□□□□□ -1.63
SYNE2-204ENST00000358025 ZSCAN16Q9H4T2 348 aaPredicted RBP4.88□□□□□ -1.63
SYNE2-204ENST00000358025 DCTN1Q14203 1278 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 KRT85P78386 507 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 PYM1Q9BRP8 204 aaKnown RBP4.88□□□□□ -1.63
SYNE2-204ENST00000358025 LUZP1Q86V48 1076 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 PTPN23Q9H3S7 1636 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 TRIM5Q9C035 493 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 IMPACTQ9P2X3 320 aa4.88□□□□□ -1.63
SYNE2-204ENST00000358025 DAPK1P53355 1430 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 KINO60870 393 aaKnown RBP4.87□□□□□ -1.63
SYNE2-204ENST00000358025 LUC7LQ9NQ29 371 aaKnown RBP4.87□□□□□ -1.63
SYNE2-204ENST00000358025 KIAA0586Q9BVV6 1533 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 ASXL1Q8IXJ9 1541 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 LMOD2Q6P5Q4 547 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 ZNHIT6Q9NWK9 470 aaKnown RBP4.87□□□□□ -1.63
SYNE2-204ENST00000358025 EFCC1Q9HA90 598 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 AOX1Q06278 1338 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 KDM4AO75164 1064 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 TMPOP42166 694 aaKnown RBP4.87□□□□□ -1.63
SYNE2-204ENST00000358025 GRIN2BQ13224 1484 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 CCDC150Q8NCX0 1101 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 C9orf84Q5VXU9 1444 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 ARFGAP3Q9NP61 516 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 RBM28Q9NW13 759 aaKnown RBP4.87□□□□□ -1.63
SYNE2-204ENST00000358025 MAP3K11Q16584 847 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 SPTLC3Q9NUV7 552 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 HNRNPMP52272 730 aaKnown RBP eCLIP4.87□□□□□ -1.63
SYNE2-204ENST00000358025 RIPK4P57078 832 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 NEUROD2Q15784 382 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 CYP46A1Q9Y6A2 500 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 HOXA7P31268 230 aaPredicted RBP4.87□□□□□ -1.63
SYNE2-204ENST00000358025 PTPRGP23470 1445 aa4.87□□□□□ -1.63
SYNE2-204ENST00000358025 NOLC1Q14978 699 aaKnown RBP eCLIP4.87□□□□□ -1.63
SYNE2-204ENST00000358025 TMED8Q6PL24 325 aaPredicted RBP4.87□□□□□ -1.63
SYNE2-204ENST00000358025 PAXIP1Q6ZW49 1069 aaPredicted RBP4.87□□□□□ -1.63
SYNE2-204ENST00000358025 TTLL5Q6EMB2 1281 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 BABAM1Q9NWV8 329 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 HMG20BQ9P0W2 317 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 MKRN1Q9UHC7 482 aaKnown RBP4.86□□□□□ -1.63
SYNE2-204ENST00000358025 PTPN14Q15678 1187 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 TAF7LQ5H9L4 462 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 RASSF4Q9H2L5 321 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 SBNO2Q9Y2G9 1366 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 GLRX3O76003 335 aaKnown RBP4.86□□□□□ -1.63
SYNE2-204ENST00000358025 SF3A1Q15459 793 aaKnown RBP4.86□□□□□ -1.63
SYNE2-204ENST00000358025 SMARCE1Q969G3 411 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 ELP1O95163 1332 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 SNAPC4Q5SXM2 1469 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 KANK3Q6NY19 840 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 TMCO3Q6UWJ1 677 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 PDE4CQ08493 712 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 RPAINQ86UA6 219 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 LIMCH1Q9UPQ0 1083 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 NUP62CLQ9H1M0 184 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 TNMDQ9H2S6 317 aa4.86□□□□□ -1.63
SYNE2-204ENST00000358025 ADCY5O95622 1261 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 SYNE3Q6ZMZ3 975 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 ZNF521Q96K83 1311 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 DMTNQ08495 405 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 SPRYD3Q8NCJ5 442 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 SLFNL1Q499Z3 407 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 B4GALNT4Q76KP1 1039 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 CCDC47Q96A33 483 aaKnown RBP4.85□□□□□ -1.63
SYNE2-204ENST00000358025 LNPKQ9C0E8 428 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 TBC1D9Q6ZT07 1266 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 CTNNA3Q9UI47 895 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 HECW1Q76N89 1606 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 KCNJ6P48051 423 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 SRPK2P78362 688 aaKnown RBP4.85□□□□□ -1.63
SYNE2-204ENST00000358025 DCTPP1Q9H773 170 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 FILIP1LQ4L180 1135 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 SFPQP23246 707 aaKnown RBP eCLIP4.85□□□□□ -1.63
SYNE2-204ENST00000358025 PIP4K2BP78356 416 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 TRIM27P14373 513 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 SCAF11Q99590 1463 aaKnown RBP4.85□□□□□ -1.63
SYNE2-204ENST00000358025 MLECQ14165 292 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 CEP57L1Q8IYX8 460 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 GAS2L2Q8NHY3 880 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 TESK2Q96S53 571 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 EHBP1Q8NDI1 1231 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 EPRSP07814 1512 aaKnown RBP4.85□□□□□ -1.63
SYNE2-204ENST00000358025 GOLGA6L7A0A1B0GV03 622 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 TRIM6-TRIM34B2RNG4 842 aa4.85□□□□□ -1.63
SYNE2-204ENST00000358025 UGGT2Q9NYU1 1516 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms