RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 SOS2Q07890 1332 aaPredicted RBP22.53■■□□□ 1.2
TPM1-205ENST00000357980 GCP02774 474 aa22.52■■□□□ 1.2
TPM1-205ENST00000357980 HOXC9P31274 260 aa22.52■■□□□ 1.2
TPM1-205ENST00000357980 NCBP3Q53F19 620 aaKnown RBP22.52■■□□□ 1.2
TPM1-205ENST00000357980 PNNQ9H307 717 aaKnown RBP22.52■■□□□ 1.2
TPM1-205ENST00000357980 ARHGEF10O15013 1369 aa22.51■■□□□ 1.19
TPM1-205ENST00000357980 PHF23Q9BUL5 403 aaPredicted RBP22.51■■□□□ 1.19
TPM1-205ENST00000357980 ROBO1Q9Y6N7 1651 aa22.5■■□□□ 1.19
TPM1-205ENST00000357980 CDCA7LQ96GN5 454 aa22.5■■□□□ 1.19
TPM1-205ENST00000357980 HMOX1P09601 288 aa22.49■■□□□ 1.19
TPM1-205ENST00000357980 PRKAR2BP31323 418 aa22.49■■□□□ 1.19
TPM1-205ENST00000357980 ARHGEF25Q86VW2 580 aa22.48■■□□□ 1.19
TPM1-205ENST00000357980 IP6K1Q92551 441 aa22.48■■□□□ 1.19
TPM1-205ENST00000357980 GTF3C3Q9Y5Q9 886 aa22.48■■□□□ 1.19
TPM1-205ENST00000357980 MAPK8IP3Q9UPT6 1336 aa22.48■■□□□ 1.19
TPM1-205ENST00000357980 CCDC27Q2M243 656 aa22.47■■□□□ 1.19
TPM1-205ENST00000357980 WWC1Q8IX03 1113 aa22.47■■□□□ 1.19
TPM1-205ENST00000357980 RRP7AQ9Y3A4 280 aaKnown RBP22.47■■□□□ 1.19
TPM1-205ENST00000357980 TMPOP42166 694 aaKnown RBP22.45■■□□□ 1.19
TPM1-205ENST00000357980 GOLGA2Q08379 1002 aa22.45■■□□□ 1.19
TPM1-205ENST00000357980 KDRP35968 1356 aa22.45■■□□□ 1.18
TPM1-205ENST00000357980 NEUROD2Q15784 382 aa22.45■■□□□ 1.18
TPM1-205ENST00000357980 IGSF1Q8N6C5 1336 aa22.45■■□□□ 1.18
TPM1-205ENST00000357980 ABCA3Q99758 1704 aa22.45■■□□□ 1.18
TPM1-205ENST00000357980 AHDC1Q5TGY3 1603 aaPredicted RBP22.44■■□□□ 1.18
TPM1-205ENST00000357980 AEBP1Q8IUX7 1158 aa22.44■■□□□ 1.18
TPM1-205ENST00000357980 SULT6B1Q6IMI4 303 aa22.43■■□□□ 1.18
TPM1-205ENST00000357980 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
TPM1-205ENST00000357980 PHACTR3Q96KR7 559 aa22.43■■□□□ 1.18
TPM1-205ENST00000357980 DLG5Q8TDM6 1919 aa22.43■■□□□ 1.18
TPM1-205ENST00000357980 COL18A1P39060 1754 aa22.43■■□□□ 1.18
TPM1-205ENST00000357980 RGPD5Q99666 1765 aa22.43■■□□□ 1.18
TPM1-205ENST00000357980 PLEKHG5O94827 1062 aa22.42■■□□□ 1.18
TPM1-205ENST00000357980 SLFN5Q08AF3 891 aa22.42■■□□□ 1.18
TPM1-205ENST00000357980 EYA1Q99502 592 aa22.42■■□□□ 1.18
TPM1-205ENST00000357980 ABCC6O95255 1503 aa22.42■■□□□ 1.18
TPM1-205ENST00000357980 TRMT2AQ8IZ69 625 aaKnown RBP22.41■■□□□ 1.18
TPM1-205ENST00000357980 RGPD2P0DJD1 1756 aa22.41■■□□□ 1.18
TPM1-205ENST00000357980 DUSP27Q5VZP5 1158 aa22.41■■□□□ 1.18
TPM1-205ENST00000357980 SPINK5Q9NQ38 1064 aaPredicted RBP22.41■■□□□ 1.18
TPM1-205ENST00000357980 NEFMP07197 916 aa22.4■■□□□ 1.18
TPM1-205ENST00000357980 CABLES1Q8TDN4 633 aa22.4■■□□□ 1.18
TPM1-205ENST00000357980 TRIM35Q9UPQ4 493 aa22.4■■□□□ 1.18
TPM1-205ENST00000357980 WDR63Q8IWG1 891 aa22.39■■□□□ 1.17
TPM1-205ENST00000357980 SUPT16HQ9Y5B9 1047 aaKnown RBP22.39■■□□□ 1.17
TPM1-205ENST00000357980 CAMTA1Q9Y6Y1 1673 aa22.39■■□□□ 1.17
TPM1-205ENST00000357980 NFE2L2Q16236 605 aa22.38■■□□□ 1.17
TPM1-205ENST00000357980 CPDO75976 1380 aa22.38■■□□□ 1.17
TPM1-205ENST00000357980 E9PSI1 815 aa22.38■■□□□ 1.17
TPM1-205ENST00000357980 RIPK4P57078 832 aa22.38■■□□□ 1.17
TPM1-205ENST00000357980 ZC3H6P61129 1189 aaKnown RBP22.38■■□□□ 1.17
TPM1-205ENST00000357980 ZBTB7CA1YPR0 619 aa22.37■■□□□ 1.17
TPM1-205ENST00000357980 LTV1Q96GA3 475 aaPredicted RBP22.36■■□□□ 1.17
TPM1-205ENST00000357980 NCAPD2Q15021 1401 aa22.36■■□□□ 1.17
TPM1-205ENST00000357980 AXIN2Q9Y2T1 843 aa22.36■■□□□ 1.17
TPM1-205ENST00000357980 LMO7Q8WWI1 1683 aa22.35■■□□□ 1.17
TPM1-205ENST00000357980 KIAA0232Q92628 1395 aa22.34■■□□□ 1.17
TPM1-205ENST00000357980 COL22A1Q8NFW1 1626 aaPredicted RBP22.33■■□□□ 1.16
TPM1-205ENST00000357980 RNF123Q5XPI4 1314 aa22.33■■□□□ 1.16
TPM1-205ENST00000357980 NBPF6Q5VWK0 638 aa22.32■■□□□ 1.16
TPM1-205ENST00000357980 NBPF4Q96M43 638 aa22.32■■□□□ 1.16
TPM1-205ENST00000357980 FAM208AQ9UK61 1670 aaKnown RBP22.32■■□□□ 1.16
TPM1-205ENST00000357980 PHLPP1O60346 1717 aa22.32■■□□□ 1.16
TPM1-205ENST00000357980 COL16A1Q07092 1604 aaPredicted RBP22.32■■□□□ 1.16
TPM1-205ENST00000357980 ANKRD24Q8TF21 1146 aa22.31■■□□□ 1.16
TPM1-205ENST00000357980 ERBB3P21860 1342 aa22.31■■□□□ 1.16
TPM1-205ENST00000357980 RCAN3Q9UKA8 241 aa22.31■■□□□ 1.16
TPM1-205ENST00000357980 IL16Q14005 1332 aa22.31■■□□□ 1.16
TPM1-205ENST00000357980 TOM1O60784 492 aa22.3■■□□□ 1.16
TPM1-205ENST00000357980 LRRC59Q96AG4 307 aaKnown RBP22.29■■□□□ 1.16
TPM1-205ENST00000357980 USHBP1Q8N6Y0 703 aa22.29■■□□□ 1.16
TPM1-205ENST00000357980 LMOD3Q0VAK6 560 aa22.27■■□□□ 1.16
TPM1-205ENST00000357980 CHRNA2Q15822 529 aa22.27■■□□□ 1.16
TPM1-205ENST00000357980 NEFLP07196 543 aa22.27■■□□□ 1.15
TPM1-205ENST00000357980 MTHFSDQ2M296 383 aaKnown RBP22.26■■□□□ 1.15
TPM1-205ENST00000357980 MYH16Q9H6N6 1097 aa22.25■■□□□ 1.15
TPM1-205ENST00000357980 FKBP8Q14318 412 aa22.24■■□□□ 1.15
TPM1-205ENST00000357980 PRDM11Q9NQV5 511 aa22.24■■□□□ 1.15
TPM1-205ENST00000357980 FANCIQ9NVI1 1328 aa22.23■■□□□ 1.15
TPM1-205ENST00000357980 GAS2L2Q8NHY3 880 aa22.23■■□□□ 1.15
TPM1-205ENST00000357980 THUMPD2Q9BTF0 503 aaKnown RBP22.23■■□□□ 1.15
TPM1-205ENST00000357980 FAM83GA6ND36 823 aa22.22■■□□□ 1.15
TPM1-205ENST00000357980 HAP1P54257 671 aaPredicted RBP22.22■■□□□ 1.15
TPM1-205ENST00000357980 CALD1Q05682 793 aaKnown RBP22.22■■□□□ 1.15
TPM1-205ENST00000357980 LRRC37A3O60309 1634 aa22.22■■□□□ 1.15
TPM1-205ENST00000357980 UBAP1LF5GYI3 381 aa22.22■■□□□ 1.15
TPM1-205ENST00000357980 COL5A2P05997 1499 aaPredicted RBP22.21■■□□□ 1.15
TPM1-205ENST00000357980 PIP4K2BP78356 416 aa22.21■■□□□ 1.15
TPM1-205ENST00000357980 TSR2Q969E8 191 aaKnown RBP22.2■■□□□ 1.14
TPM1-205ENST00000357980 ZNF853P0CG23 659 aa22.19■■□□□ 1.14
TPM1-205ENST00000357980 RRP1P56182 461 aaKnown RBP22.19■■□□□ 1.14
TPM1-205ENST00000357980 DCTN1Q14203 1278 aa22.19■■□□□ 1.14
TPM1-205ENST00000357980 IFT57Q9NWB7 429 aa22.19■■□□□ 1.14
TPM1-205ENST00000357980 COL14A1Q05707 1796 aaKnown RBP22.18■■□□□ 1.14
TPM1-205ENST00000357980 IRX6P78412 446 aaPredicted RBP22.17■■□□□ 1.14
TPM1-205ENST00000357980 CERKQ8TCT0 537 aa22.17■■□□□ 1.14
TPM1-205ENST00000357980 MAP3K5Q99683 1374 aa22.17■■□□□ 1.14
TPM1-205ENST00000357980 NLRP2Q9NX02 1062 aa22.17■■□□□ 1.14
TPM1-205ENST00000357980 HTATSF1O43719 755 aaKnown RBP22.16■■□□□ 1.14
TPM1-205ENST00000357980 MCM10Q7L590 875 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms