RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 APBB1O00213 710 aa25.67■■□□□ 1.7
COL13A1-202ENST00000357811 HSCBQ8IWL3 235 aa25.67■■□□□ 1.7
COL13A1-202ENST00000357811 RIMS2Q9UQ26 1411 aa25.66■■□□□ 1.7
COL13A1-202ENST00000357811 SIRT2Q8IXJ6 389 aa25.66■■□□□ 1.7
COL13A1-202ENST00000357811 GNAI1P63096 354 aa25.65■■□□□ 1.7
COL13A1-202ENST00000357811 TSPOAP1O95153 1857 aa25.65■■□□□ 1.7
COL13A1-202ENST00000357811 MED14O60244 1454 aa25.64■■□□□ 1.69
COL13A1-202ENST00000357811 ESF1Q9H501 851 aaKnown RBP25.63■■□□□ 1.69
COL13A1-202ENST00000357811 MCM4P33991 863 aa25.62■■□□□ 1.69
COL13A1-202ENST00000357811 UBE2Q2Q8WVN8 375 aa25.62■■□□□ 1.69
COL13A1-202ENST00000357811 RBM42Q9BTD8 480 aaKnown RBP25.62■■□□□ 1.69
COL13A1-202ENST00000357811 MAP2P11137 1827 aaKnown RBP25.62■■□□□ 1.69
COL13A1-202ENST00000357811 SULT6B1Q6IMI4 303 aa25.62■■□□□ 1.69
COL13A1-202ENST00000357811 MCM10Q7L590 875 aa25.61■■□□□ 1.69
COL13A1-202ENST00000357811 A2ML1A8K2U0 1454 aa25.61■■□□□ 1.69
COL13A1-202ENST00000357811 ZMYM3Q14202 1370 aa25.61■■□□□ 1.69
COL13A1-202ENST00000357811 IFT57Q9NWB7 429 aa25.61■■□□□ 1.69
COL13A1-202ENST00000357811 CCDC61Q9Y6R9 512 aa25.6■■□□□ 1.69
COL13A1-202ENST00000357811 MIS18AQ9NYP9 233 aa25.59■■□□□ 1.69
COL13A1-202ENST00000357811 CHMP5Q9NZZ3 219 aa25.59■■□□□ 1.69
COL13A1-202ENST00000357811 CD2BP2O95400 341 aaKnown RBP25.59■■□□□ 1.69
COL13A1-202ENST00000357811 C16orf71Q8IYS4 520 aaPredicted RBP25.58■■□□□ 1.69
COL13A1-202ENST00000357811 CFAP44Q96MT7 982 aa25.58■■□□□ 1.69
COL13A1-202ENST00000357811 HSP90AA1P07900 732 aaKnown RBP25.57■■□□□ 1.68
COL13A1-202ENST00000357811 HSP90AB1P08238 724 aaKnown RBP25.57■■□□□ 1.68
COL13A1-202ENST00000357811 CALD1Q05682 793 aaKnown RBP25.57■■□□□ 1.68
COL13A1-202ENST00000357811 ANKRD26Q9UPS8 1709 aa25.57■■□□□ 1.68
COL13A1-202ENST00000357811 TBC1D9Q6ZT07 1266 aa25.57■■□□□ 1.68
COL13A1-202ENST00000357811 KIF20BQ96Q89 1820 aa25.57■■□□□ 1.68
COL13A1-202ENST00000357811 PRR36Q9H6K5 1346 aa25.56■■□□□ 1.68
COL13A1-202ENST00000357811 ZNF853P0CG23 659 aa25.56■■□□□ 1.68
COL13A1-202ENST00000357811 CLTCQ00610 1675 aaKnown RBP25.55■■□□□ 1.68
COL13A1-202ENST00000357811 CPS1P31327 1500 aa25.55■■□□□ 1.68
COL13A1-202ENST00000357811 BMP2KLQ5H9B9 411 aa25.54■■□□□ 1.68
COL13A1-202ENST00000357811 HSP90AB2PQ58FF8 381 aa25.54■■□□□ 1.68
COL13A1-202ENST00000357811 PANK2Q9BZ23 570 aa25.54■■□□□ 1.68
COL13A1-202ENST00000357811 TRAK2O60296 914 aa25.53■■□□□ 1.68
COL13A1-202ENST00000357811 EDC4Q6P2E9 1401 aaKnown RBP25.53■■□□□ 1.68
COL13A1-202ENST00000357811 GCC1Q96CN9 775 aa25.53■■□□□ 1.68
COL13A1-202ENST00000357811 ATP7BP35670 1465 aa25.53■■□□□ 1.68
COL13A1-202ENST00000357811 EIF4A2Q14240 407 aaKnown RBP25.53■■□□□ 1.68
COL13A1-202ENST00000357811 OTUD7AQ8TE49 926 aaPredicted RBP25.52■■□□□ 1.68
COL13A1-202ENST00000357811 ZNF428Q96B54 188 aa25.51■■□□□ 1.67
COL13A1-202ENST00000357811 CPSF1Q10570 1443 aaKnown RBP25.51■■□□□ 1.67
COL13A1-202ENST00000357811 ABCC4O15439 1325 aa25.51■■□□□ 1.67
COL13A1-202ENST00000357811 SMARCA5O60264 1052 aaPredicted RBP25.51■■□□□ 1.67
COL13A1-202ENST00000357811 RBM25P49756 843 aaKnown RBP25.5■■□□□ 1.67
COL13A1-202ENST00000357811 ARHGAP45Q92619 1136 aa25.5■■□□□ 1.67
COL13A1-202ENST00000357811 KIF2CQ99661 725 aa25.5■■□□□ 1.67
COL13A1-202ENST00000357811 FOXO3O43524 673 aa25.5■■□□□ 1.67
COL13A1-202ENST00000357811 SLC26A8Q96RN1 970 aa25.5■■□□□ 1.67
COL13A1-202ENST00000357811 BRPF1P55201 1214 aaPredicted RBP25.49■■□□□ 1.67
COL13A1-202ENST00000357811 LMOD3Q0VAK6 560 aa25.49■■□□□ 1.67
COL13A1-202ENST00000357811 ZNF692Q9BU19 519 aaPredicted RBP25.49■■□□□ 1.67
COL13A1-202ENST00000357811 API5Q9BZZ5 524 aaKnown RBP25.48■■□□□ 1.67
COL13A1-202ENST00000357811 GOLGA6L3A6NEY3 463 aa25.48■■□□□ 1.67
COL13A1-202ENST00000357811 XRCC6P12956 609 aaKnown RBP eCLIP25.48■■□□□ 1.67
COL13A1-202ENST00000357811 GSPT1P15170 499 aaKnown RBP25.48■■□□□ 1.67
COL13A1-202ENST00000357811 SLC4A10Q6U841 1118 aa25.47■■□□□ 1.67
COL13A1-202ENST00000357811 PTCH1Q13635 1447 aa25.46■■□□□ 1.67
COL13A1-202ENST00000357811 ACEP12821 1306 aa25.46■■□□□ 1.67
COL13A1-202ENST00000357811 TNPO1Q92973 898 aaKnown RBP25.46■■□□□ 1.67
COL13A1-202ENST00000357811 NECTIN2Q92692 538 aa25.44■■□□□ 1.66
COL13A1-202ENST00000357811 F6X3S4 739 aa25.44■■□□□ 1.66
COL13A1-202ENST00000357811 PLEKHM2Q8IWE5 1019 aa25.44■■□□□ 1.66
COL13A1-202ENST00000357811 MEIS3Q99687 375 aa25.44■■□□□ 1.66
COL13A1-202ENST00000357811 CHMP4BQ9H444 224 aaKnown RBP25.44■■□□□ 1.66
COL13A1-202ENST00000357811 ROBO2Q9HCK4 1378 aa25.43■■□□□ 1.66
COL13A1-202ENST00000357811 CDK12Q9NYV4 1490 aaPredicted RBP25.43■■□□□ 1.66
COL13A1-202ENST00000357811 L1TD1Q5T7N2 865 aaKnown RBP25.43■■□□□ 1.66
COL13A1-202ENST00000357811 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.43■■□□□ 1.66
COL13A1-202ENST00000357811 CDC42BPGQ6DT37 1551 aa25.43■■□□□ 1.66
COL13A1-202ENST00000357811 CEBPAP49715 358 aaPredicted RBP25.43■■□□□ 1.66
COL13A1-202ENST00000357811 TTC21BQ7Z4L5 1316 aa25.42■■□□□ 1.66
COL13A1-202ENST00000357811 SLC4A2P04920 1241 aa25.42■■□□□ 1.66
COL13A1-202ENST00000357811 NUTM2GQ5VZR2 741 aa25.41■■□□□ 1.66
COL13A1-202ENST00000357811 GAS2L2Q8NHY3 880 aa25.41■■□□□ 1.66
COL13A1-202ENST00000357811 PIK3R4Q99570 1358 aa25.4■■□□□ 1.66
COL13A1-202ENST00000357811 CDC45O75419 566 aa25.4■■□□□ 1.66
COL13A1-202ENST00000357811 RIMBP3CA6NJZ7 1639 aa25.4■■□□□ 1.66
COL13A1-202ENST00000357811 RIMBP3BA6NNM3 1639 aa25.4■■□□□ 1.66
COL13A1-202ENST00000357811 AATKQ6ZMQ8 1374 aa25.4■■□□□ 1.66
COL13A1-202ENST00000357811 RIMBP3Q9UFD9 1639 aa25.4■■□□□ 1.66
COL13A1-202ENST00000357811 RRAGDQ9NQL2 400 aaPredicted RBP25.4■■□□□ 1.66
COL13A1-202ENST00000357811 DLG5Q8TDM6 1919 aa25.39■■□□□ 1.66
COL13A1-202ENST00000357811 DLC1Q96QB1 1528 aa25.39■■□□□ 1.66
COL13A1-202ENST00000357811 G2E3Q7L622 706 aa25.39■■□□□ 1.65
COL13A1-202ENST00000357811 SNX21Q969T3 373 aa25.39■■□□□ 1.65
COL13A1-202ENST00000357811 LTKP29376 864 aa25.38■■□□□ 1.65
COL13A1-202ENST00000357811 TSHZ3Q63HK5 1081 aa25.38■■□□□ 1.65
COL13A1-202ENST00000357811 DCTPP1Q9H773 170 aa25.38■■□□□ 1.65
COL13A1-202ENST00000357811 MSH6P52701 1360 aa25.37■■□□□ 1.65
COL13A1-202ENST00000357811 K7ELQ4 463 aaPredicted RBP25.37■■□□□ 1.65
COL13A1-202ENST00000357811 SSFA2P28290 1259 aa25.37■■□□□ 1.65
COL13A1-202ENST00000357811 CHL1O00533 1208 aa25.36■■□□□ 1.65
COL13A1-202ENST00000357811 CEP85Q6P2H3 762 aa25.36■■□□□ 1.65
COL13A1-202ENST00000357811 PPP6R1Q9UPN7 881 aa25.36■■□□□ 1.65
COL13A1-202ENST00000357811 DDIT3P35638 169 aa25.35■■□□□ 1.65
COL13A1-202ENST00000357811 DDX11L8A8MPP1 907 aa25.35■■□□□ 1.65
COL13A1-202ENST00000357811 FAM43AQ8N2R8 423 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms