RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 IPO8O15397 1037 aaKnown RBP18.15■□□□□ 0.5
TOP3B-201ENST00000357179 ITPRIPQ8IWB1 547 aa18.15■□□□□ 0.5
TOP3B-201ENST00000357179 ZBTB40Q9NUA8 1239 aa18.15■□□□□ 0.5
TOP3B-201ENST00000357179 K7ELQ4 463 aaPredicted RBP18.15■□□□□ 0.5
TOP3B-201ENST00000357179 PRDM10Q9NQV6 1147 aa18.14■□□□□ 0.49
TOP3B-201ENST00000357179 CD2BP2O95400 341 aaKnown RBP18.14■□□□□ 0.49
TOP3B-201ENST00000357179 ZSCAN20P17040 1043 aaPredicted RBP18.14■□□□□ 0.49
TOP3B-201ENST00000357179 ALDH1L2Q3SY69 923 aa18.14■□□□□ 0.49
TOP3B-201ENST00000357179 ATAD2Q6PL18 1390 aa18.14■□□□□ 0.49
TOP3B-201ENST00000357179 CABP2Q9NPB3 220 aa18.13■□□□□ 0.49
TOP3B-201ENST00000357179 NOB1Q9ULX3 412 aaKnown RBP18.13■□□□□ 0.49
TOP3B-201ENST00000357179 SIGLEC1Q9BZZ2 1709 aa18.13■□□□□ 0.49
TOP3B-201ENST00000357179 RBSNQ9H1K0 784 aa18.13■□□□□ 0.49
TOP3B-201ENST00000357179 CFAP65Q6ZU64 1925 aaKnown RBP18.13■□□□□ 0.49
TOP3B-201ENST00000357179 ZSCAN23Q3MJ62 389 aa18.13■□□□□ 0.49
TOP3B-201ENST00000357179 GGT6Q6P531 493 aa18.13■□□□□ 0.49
TOP3B-201ENST00000357179 ARID3AQ99856 593 aa18.13■□□□□ 0.49
TOP3B-201ENST00000357179 FOXD4L1Q9NU39 408 aa18.13■□□□□ 0.49
TOP3B-201ENST00000357179 CLTCQ00610 1675 aaKnown RBP18.12■□□□□ 0.49
TOP3B-201ENST00000357179 NUCB1Q02818 461 aa18.12■□□□□ 0.49
TOP3B-201ENST00000357179 ZNF428Q96B54 188 aa18.12■□□□□ 0.49
TOP3B-201ENST00000357179 U2SURPO15042 1029 aaKnown RBP18.12■□□□□ 0.49
TOP3B-201ENST00000357179 BRPF1P55201 1214 aaPredicted RBP18.12■□□□□ 0.49
TOP3B-201ENST00000357179 TMEM57Q8N5G2 664 aa18.12■□□□□ 0.49
TOP3B-201ENST00000357179 PNPLA6Q8IY17 1366 aa18.11■□□□□ 0.49
TOP3B-201ENST00000357179 CDC42BPGQ6DT37 1551 aa18.11■□□□□ 0.49
TOP3B-201ENST00000357179 GAS2L2Q8NHY3 880 aa18.1■□□□□ 0.49
TOP3B-201ENST00000357179 TERF2IPQ9NYB0 399 aa18.1■□□□□ 0.49
TOP3B-201ENST00000357179 CAVIN1Q6NZI2 390 aaKnown RBP18.09■□□□□ 0.49
TOP3B-201ENST00000357179 PPIP5K1Q6PFW1 1433 aa18.09■□□□□ 0.49
TOP3B-201ENST00000357179 CHMP4BQ9H444 224 aaKnown RBP18.09■□□□□ 0.49
TOP3B-201ENST00000357179 FYB1O15117 783 aa18.08■□□□□ 0.48
TOP3B-201ENST00000357179 GGNBP2Q9H3C7 697 aa18.08■□□□□ 0.48
TOP3B-201ENST00000357179 CD163L1Q9NR16 1453 aa18.08■□□□□ 0.48
TOP3B-201ENST00000357179 CCDC39Q9UFE4 941 aa18.08■□□□□ 0.48
TOP3B-201ENST00000357179 PTPRMP28827 1452 aa18.07■□□□□ 0.48
TOP3B-201ENST00000357179 DIAPH1O60610 1272 aaKnown RBP18.07■□□□□ 0.48
TOP3B-201ENST00000357179 PRIM1P49642 420 aaKnown RBP18.07■□□□□ 0.48
TOP3B-201ENST00000357179 LMBRD1Q9NUN5 540 aa18.07■□□□□ 0.48
TOP3B-201ENST00000357179 AK9Q5TCS8 1911 aa18.07■□□□□ 0.48
TOP3B-201ENST00000357179 SRPK2P78362 688 aaKnown RBP18.06■□□□□ 0.48
TOP3B-201ENST00000357179 BMP2KLQ5H9B9 411 aa18.06■□□□□ 0.48
TOP3B-201ENST00000357179 CHD1LQ86WJ1 897 aa18.06■□□□□ 0.48
TOP3B-201ENST00000357179 NCLP19338 710 aaKnown RBP18.06■□□□□ 0.48
TOP3B-201ENST00000357179 FCHSD2O94868 740 aa18.05■□□□□ 0.48
TOP3B-201ENST00000357179 MCTP1Q6DN14 999 aa18.05■□□□□ 0.48
TOP3B-201ENST00000357179 GTPBP4Q9BZE4 634 aaKnown RBP18.05■□□□□ 0.48
TOP3B-201ENST00000357179 REREQ9P2R6 1566 aa18.05■□□□□ 0.48
TOP3B-201ENST00000357179 MYRIPQ8NFW9 859 aa18.05■□□□□ 0.48
TOP3B-201ENST00000357179 GCC1Q96CN9 775 aa18.05■□□□□ 0.48
TOP3B-201ENST00000357179 PIK3R4Q99570 1358 aa18.04■□□□□ 0.48
TOP3B-201ENST00000357179 CYP2E1P05181 493 aaPredicted RBP18.04■□□□□ 0.48
TOP3B-201ENST00000357179 ARHGAP45Q92619 1136 aa18.04■□□□□ 0.48
TOP3B-201ENST00000357179 RBM42Q9BTD8 480 aaKnown RBP18.04■□□□□ 0.48
TOP3B-201ENST00000357179 SLC52A1Q9NWF4 448 aa18.04■□□□□ 0.48
TOP3B-201ENST00000357179 KIF20AO95235 890 aa18.04■□□□□ 0.48
TOP3B-201ENST00000357179 NUCB2P80303 420 aa18.03■□□□□ 0.48
TOP3B-201ENST00000357179 FAM135BQ49AJ0 1406 aa18.03■□□□□ 0.48
TOP3B-201ENST00000357179 KIF20BQ96Q89 1820 aa18.03■□□□□ 0.48
TOP3B-201ENST00000357179 LRRC7Q96NW7 1537 aa18.02■□□□□ 0.48
TOP3B-201ENST00000357179 PTCH1Q13635 1447 aa18.02■□□□□ 0.48
TOP3B-201ENST00000357179 NUTM2DQ5VT03 806 aaPredicted RBP18.02■□□□□ 0.48
TOP3B-201ENST00000357179 HDGFL2Q7Z4V5 671 aaPredicted RBP18.02■□□□□ 0.48
TOP3B-201ENST00000357179 LNPKQ9C0E8 428 aa18.01■□□□□ 0.47
TOP3B-201ENST00000357179 NEO1Q92859 1461 aa18.01■□□□□ 0.47
TOP3B-201ENST00000357179 IDI1Q13907 227 aa18.01■□□□□ 0.47
TOP3B-201ENST00000357179 SAFB2Q14151 953 aaKnown RBP eCLIP18.01■□□□□ 0.47
TOP3B-201ENST00000357179 LRSAM1Q6UWE0 723 aa18.01■□□□□ 0.47
TOP3B-201ENST00000357179 YTHDC2Q9H6S0 1430 aaKnown RBP18■□□□□ 0.47
TOP3B-201ENST00000357179 ZBTB7BO15156 539 aaPredicted RBP18■□□□□ 0.47
TOP3B-201ENST00000357179 DIP2CQ9Y2E4 1556 aa18■□□□□ 0.47
TOP3B-201ENST00000357179 PPP4R3BQ5MIZ7 849 aa18■□□□□ 0.47
TOP3B-201ENST00000357179 ZNF710Q8N1W2 664 aa18■□□□□ 0.47
TOP3B-201ENST00000357179 TMEM131LA2VDJ0 1609 aa17.99■□□□□ 0.47
TOP3B-201ENST00000357179 NPM1P06748 294 aaKnown RBP eCLIP17.99■□□□□ 0.47
TOP3B-201ENST00000357179 GPT2Q8TD30 523 aa17.99■□□□□ 0.47
TOP3B-201ENST00000357179 GTF2F1P35269 517 aaKnown RBP eCLIP17.99■□□□□ 0.47
TOP3B-201ENST00000357179 KIAA2012Q0VF49 1180 aa17.99■□□□□ 0.47
TOP3B-201ENST00000357179 TBC1D9Q6ZT07 1266 aa17.99■□□□□ 0.47
TOP3B-201ENST00000357179 PRIMPOLQ96LW4 560 aa17.99■□□□□ 0.47
TOP3B-201ENST00000357179 LETM1O95202 739 aaPredicted RBP17.98■□□□□ 0.47
TOP3B-201ENST00000357179 ARHGEF40Q8TER5 1519 aa17.98■□□□□ 0.47
TOP3B-201ENST00000357179 STK26Q9P289 416 aa17.98■□□□□ 0.47
TOP3B-201ENST00000357179 MRPL50Q8N5N7 158 aaKnown RBP17.97■□□□□ 0.47
TOP3B-201ENST00000357179 RBM27Q9P2N5 1060 aaKnown RBP17.97■□□□□ 0.47
TOP3B-201ENST00000357179 PRAM1Q96QH2 718 aa17.97■□□□□ 0.47
TOP3B-201ENST00000357179 MINK1Q8N4C8 1332 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-201ENST00000357179 VAMP4O75379 141 aa17.96■□□□□ 0.47
TOP3B-201ENST00000357179 HMGN5P82970 282 aaKnown RBP17.96■□□□□ 0.47
TOP3B-201ENST00000357179 PDE4CQ08493 712 aa17.96■□□□□ 0.47
TOP3B-201ENST00000357179 NFE2L2Q16236 605 aa17.96■□□□□ 0.47
TOP3B-201ENST00000357179 BBXQ8WY36 941 aaPredicted RBP17.96■□□□□ 0.47
TOP3B-201ENST00000357179 ABCC4O15439 1325 aa17.95■□□□□ 0.46
TOP3B-201ENST00000357179 PRPF40AO75400 957 aaKnown RBP17.95■□□□□ 0.46
TOP3B-201ENST00000357179 PRKAR2BP31323 418 aa17.95■□□□□ 0.46
TOP3B-201ENST00000357179 CBX1P83916 185 aa17.95■□□□□ 0.46
TOP3B-201ENST00000357179 ANKRD45Q5TZF3 282 aa17.95■□□□□ 0.46
TOP3B-201ENST00000357179 CFAP44Q96MT7 982 aa17.95■□□□□ 0.46
TOP3B-201ENST00000357179 TMEM63CQ9P1W3 806 aa17.95■□□□□ 0.46
TOP3B-201ENST00000357179 PREX1Q8TCU6 1659 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms