RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ARHGEF12Q9NZN5 1544 aa14.91□□□□□ -0.02
COLCA1-201ENST00000355430 TESK2Q96S53 571 aa14.91□□□□□ -0.02
COLCA1-201ENST00000355430 HSPA2P54652 639 aa14.91□□□□□ -0.02
COLCA1-201ENST00000355430 KRT28Q7Z3Y7 464 aa14.91□□□□□ -0.02
COLCA1-201ENST00000355430 KDM6BO15054 1643 aa14.9□□□□□ -0.02
COLCA1-201ENST00000355430 NEK4P51957 841 aa14.9□□□□□ -0.02
COLCA1-201ENST00000355430 G3BP1Q13283 466 aaKnown RBP eCLIP14.9□□□□□ -0.02
COLCA1-201ENST00000355430 UHRF1BP1Q6BDS2 1440 aa14.89□□□□□ -0.03
COLCA1-201ENST00000355430 PER1O15534 1290 aaPredicted RBP14.89□□□□□ -0.03
COLCA1-201ENST00000355430 LMTK3Q96Q04 1460 aa14.89□□□□□ -0.03
COLCA1-201ENST00000355430 CIZ1Q9ULV3 898 aaPredicted RBP14.88□□□□□ -0.03
COLCA1-201ENST00000355430 TBC1D32Q96NH3 1257 aa14.88□□□□□ -0.03
COLCA1-201ENST00000355430 SMC3Q9UQE7 1217 aa14.88□□□□□ -0.03
COLCA1-201ENST00000355430 CCDC30Q5VVM6 783 aa14.88□□□□□ -0.03
COLCA1-201ENST00000355430 RUFY2Q8WXA3 655 aa14.88□□□□□ -0.03
COLCA1-201ENST00000355430 THUMPD2Q9BTF0 503 aaKnown RBP14.88□□□□□ -0.03
COLCA1-201ENST00000355430 TRIM27P14373 513 aa14.87□□□□□ -0.03
COLCA1-201ENST00000355430 CCDC39Q9UFE4 941 aa14.87□□□□□ -0.03
COLCA1-201ENST00000355430 FAM177BA6PVY3 158 aa14.87□□□□□ -0.03
COLCA1-201ENST00000355430 H3BQV1 296 aa14.87□□□□□ -0.03
COLCA1-201ENST00000355430 IFFO2Q5TF58 517 aa14.87□□□□□ -0.03
COLCA1-201ENST00000355430 SULT6B1Q6IMI4 303 aa14.87□□□□□ -0.03
COLCA1-201ENST00000355430 SPATA31E1Q6ZUB1 1445 aa14.87□□□□□ -0.03
COLCA1-201ENST00000355430 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
COLCA1-201ENST00000355430 VPS37CA5D8V6 355 aaPredicted RBP14.87□□□□□ -0.03
COLCA1-201ENST00000355430 PCDHB15Q9Y5E8 787 aa14.87□□□□□ -0.03
COLCA1-201ENST00000355430 WASLO00401 505 aaPredicted RBP14.86□□□□□ -0.03
COLCA1-201ENST00000355430 HSP90AB4PQ58FF6 505 aa14.86□□□□□ -0.03
COLCA1-201ENST00000355430 NPHP3Q7Z494 1330 aa14.86□□□□□ -0.03
COLCA1-201ENST00000355430 FCHSD2O94868 740 aa14.86□□□□□ -0.03
COLCA1-201ENST00000355430 ESPNB1AK53 854 aa14.86□□□□□ -0.03
COLCA1-201ENST00000355430 TPM2P07951 284 aa14.86□□□□□ -0.03
COLCA1-201ENST00000355430 IFIT2P09913 472 aaKnown RBP14.86□□□□□ -0.03
COLCA1-201ENST00000355430 ZKSCAN1P17029 563 aaPredicted RBP14.85□□□□□ -0.03
COLCA1-201ENST00000355430 COL17A1Q9UMD9 1497 aaPredicted RBP14.85□□□□□ -0.03
COLCA1-201ENST00000355430 EIF2AK4Q9P2K8 1649 aaKnown RBP14.85□□□□□ -0.03
COLCA1-201ENST00000355430 SLC4A2P04920 1241 aa14.85□□□□□ -0.03
COLCA1-201ENST00000355430 EXOC5O00471 708 aa14.85□□□□□ -0.03
COLCA1-201ENST00000355430 TPM4P67936 248 aa14.85□□□□□ -0.03
COLCA1-201ENST00000355430 ERC2O15083 957 aa14.84□□□□□ -0.03
COLCA1-201ENST00000355430 UBTFL1P0CB47 393 aaPredicted RBP14.84□□□□□ -0.03
COLCA1-201ENST00000355430 NFE2L2Q16236 605 aa14.84□□□□□ -0.03
COLCA1-201ENST00000355430 NOS1P29475 1434 aa14.84□□□□□ -0.03
COLCA1-201ENST00000355430 TNNQ9UQP3 1299 aa14.84□□□□□ -0.03
COLCA1-201ENST00000355430 FAM184AQ8NB25 1140 aa14.84□□□□□ -0.03
COLCA1-201ENST00000355430 DUOX2Q9NRD8 1548 aa14.84□□□□□ -0.03
COLCA1-201ENST00000355430 MBD3O95983 291 aa14.84□□□□□ -0.03
COLCA1-201ENST00000355430 TSPY26PQ9H489 355 aa14.84□□□□□ -0.03
COLCA1-201ENST00000355430 RAD21O60216 631 aa14.83□□□□□ -0.03
COLCA1-201ENST00000355430 VPS53Q5VIR6 699 aa14.83□□□□□ -0.03
COLCA1-201ENST00000355430 TMOD3Q9NYL9 352 aa14.83□□□□□ -0.03
COLCA1-201ENST00000355430 NCKAP5LQ9HCH0 1330 aa14.83□□□□□ -0.03
COLCA1-201ENST00000355430 ZMYM4Q5VZL5 1548 aa14.83□□□□□ -0.03
COLCA1-201ENST00000355430 ABCA5Q8WWZ7 1642 aa14.83□□□□□ -0.03
COLCA1-201ENST00000355430 SHANK2Q9UPX8 1470 aa14.83□□□□□ -0.04
COLCA1-201ENST00000355430 CCDC27Q2M243 656 aa14.83□□□□□ -0.04
COLCA1-201ENST00000355430 STARD3NLO95772 234 aa14.83□□□□□ -0.04
COLCA1-201ENST00000355430 RRS1Q15050 365 aaKnown RBP14.83□□□□□ -0.04
COLCA1-201ENST00000355430 TNPO1Q92973 898 aaKnown RBP14.83□□□□□ -0.04
COLCA1-201ENST00000355430 MARCH6O60337 910 aa14.83□□□□□ -0.04
COLCA1-201ENST00000355430 CHMP4CQ96CF2 233 aa14.83□□□□□ -0.04
COLCA1-201ENST00000355430 GOLGA6L19H0YKK7 550 aa14.82□□□□□ -0.04
COLCA1-201ENST00000355430 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
COLCA1-201ENST00000355430 RBM10P98175 930 aaKnown RBP14.82□□□□□ -0.04
COLCA1-201ENST00000355430 ALDH1L2Q3SY69 923 aa14.82□□□□□ -0.04
COLCA1-201ENST00000355430 CEP170Q5SW79 1584 aa14.82□□□□□ -0.04
COLCA1-201ENST00000355430 GNAI2P04899 355 aa14.82□□□□□ -0.04
COLCA1-201ENST00000355430 KDM2BQ8NHM5 1336 aa14.82□□□□□ -0.04
COLCA1-201ENST00000355430 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.82□□□□□ -0.04
COLCA1-201ENST00000355430 SEC24BO95487 1268 aa14.82□□□□□ -0.04
COLCA1-201ENST00000355430 ZMYM3Q14202 1370 aa14.81□□□□□ -0.04
COLCA1-201ENST00000355430 ADGRL2O95490 1459 aa14.81□□□□□ -0.04
COLCA1-201ENST00000355430 GNAI3P08754 354 aa14.81□□□□□ -0.04
COLCA1-201ENST00000355430 ZNF428Q96B54 188 aa14.81□□□□□ -0.04
COLCA1-201ENST00000355430 PBRM1Q86U86 1689 aa14.81□□□□□ -0.04
COLCA1-201ENST00000355430 ABCC11Q96J66 1382 aa14.81□□□□□ -0.04
COLCA1-201ENST00000355430 MCM2P49736 904 aa14.81□□□□□ -0.04
COLCA1-201ENST00000355430 SF3A1Q15459 793 aaKnown RBP14.81□□□□□ -0.04
COLCA1-201ENST00000355430 SYNE3Q6ZMZ3 975 aa14.81□□□□□ -0.04
COLCA1-201ENST00000355430 CCDC34Q96HJ3 373 aa14.81□□□□□ -0.04
COLCA1-201ENST00000355430 ATP10AO60312 1499 aa14.81□□□□□ -0.04
COLCA1-201ENST00000355430 SSFA2P28290 1259 aa14.8□□□□□ -0.04
COLCA1-201ENST00000355430 RIMS2Q9UQ26 1411 aa14.8□□□□□ -0.04
COLCA1-201ENST00000355430 SURF6O75683 361 aaKnown RBP14.8□□□□□ -0.04
COLCA1-201ENST00000355430 ZNF592Q92610 1267 aa14.8□□□□□ -0.04
COLCA1-201ENST00000355430 KIF3AQ9Y496 699 aa14.8□□□□□ -0.04
COLCA1-201ENST00000355430 PRKCSHP14314 528 aaPredicted RBP14.8□□□□□ -0.04
COLCA1-201ENST00000355430 BICD2Q8TD16 824 aa14.8□□□□□ -0.04
COLCA1-201ENST00000355430 C19orf44Q9H6X5 657 aa14.8□□□□□ -0.04
COLCA1-201ENST00000355430 ZNF652Q9Y2D9 606 aa14.8□□□□□ -0.04
COLCA1-201ENST00000355430 DISP1Q96F81 1524 aa14.8□□□□□ -0.04
COLCA1-201ENST00000355430 BECN2A8MW95 431 aa14.79□□□□□ -0.04
COLCA1-201ENST00000355430 ZPR1O75312 459 aa14.79□□□□□ -0.04
COLCA1-201ENST00000355430 PIK3C2GO75747 1445 aa14.79□□□□□ -0.04
COLCA1-201ENST00000355430 APPP05067 770 aa14.79□□□□□ -0.04
COLCA1-201ENST00000355430 AKAP17AQ02040 695 aaKnown RBP14.79□□□□□ -0.04
COLCA1-201ENST00000355430 SMARCA5O60264 1052 aaPredicted RBP14.79□□□□□ -0.04
COLCA1-201ENST00000355430 RLBP1P12271 317 aa14.79□□□□□ -0.04
COLCA1-201ENST00000355430 AMOTQ4VCS5 1084 aa14.79□□□□□ -0.04
COLCA1-201ENST00000355430 CNTROBQ8N137 903 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms