RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 SLC24A1O60721 1099 aa16.1■□□□□ 0.17
CDRT1-202ENST00000354433 TESK2Q96S53 571 aa16.1■□□□□ 0.17
CDRT1-202ENST00000354433 EDC4Q6P2E9 1401 aaKnown RBP16.09■□□□□ 0.17
CDRT1-202ENST00000354433 FAM196AQ6ZSG2 479 aa16.09■□□□□ 0.17
CDRT1-202ENST00000354433 ARHGEF25Q86VW2 580 aa16.09■□□□□ 0.17
CDRT1-202ENST00000354433 RGPD1P0DJD0 1748 aa16.09■□□□□ 0.17
CDRT1-202ENST00000354433 NINLQ9Y2I6 1382 aa16.09■□□□□ 0.17
CDRT1-202ENST00000354433 WDR17Q8IZU2 1322 aa16.09■□□□□ 0.17
CDRT1-202ENST00000354433 AXIN2Q9Y2T1 843 aa16.09■□□□□ 0.17
CDRT1-202ENST00000354433 NFAT5O94916 1531 aa16.08■□□□□ 0.16
CDRT1-202ENST00000354433 TRIM37O94972 964 aa16.08■□□□□ 0.16
CDRT1-202ENST00000354433 TMF1P82094 1093 aa16.08■□□□□ 0.16
CDRT1-202ENST00000354433 EN1Q05925 392 aaPredicted RBP16.08■□□□□ 0.16
CDRT1-202ENST00000354433 PUS7Q96PZ0 661 aaKnown RBP16.08■□□□□ 0.16
CDRT1-202ENST00000354433 USP31Q70CQ4 1352 aa16.07■□□□□ 0.16
CDRT1-202ENST00000354433 DDB1Q16531 1140 aa16.05■□□□□ 0.16
CDRT1-202ENST00000354433 COL18A1P39060 1754 aa16.05■□□□□ 0.16
CDRT1-202ENST00000354433 SRCAPQ6ZRS2 3230 aa16.04■□□□□ 0.16
CDRT1-202ENST00000354433 PARP4Q9UKK3 1724 aaKnown RBP16.04■□□□□ 0.16
CDRT1-202ENST00000354433 ABCC6O95255 1503 aa16.03■□□□□ 0.16
CDRT1-202ENST00000354433 LRRC37A3O60309 1634 aa16.03■□□□□ 0.16
CDRT1-202ENST00000354433 TNS1Q9HBL0 1735 aaKnown RBP16.03■□□□□ 0.16
CDRT1-202ENST00000354433 OVOS2A0A0G2JMS6 1433 aa16.03■□□□□ 0.16
CDRT1-202ENST00000354433 OVOS2A0A0J9YW53 1432 aa16.03■□□□□ 0.16
CDRT1-202ENST00000354433 DISP2A7MBM2 1401 aa16.03■□□□□ 0.16
CDRT1-202ENST00000354433 OVOS2Q6IE36 1432 aa16.03■□□□□ 0.16
CDRT1-202ENST00000354433 APBA3O96018 575 aa16.03■□□□□ 0.16
CDRT1-202ENST00000354433 USP54Q70EL1 1684 aa16.03■□□□□ 0.16
CDRT1-202ENST00000354433 ANKRD36BQ8N2N9 1353 aa16.03■□□□□ 0.16
CDRT1-202ENST00000354433 EZH2Q15910 746 aaKnown RBP16.02■□□□□ 0.16
CDRT1-202ENST00000354433 PSDA5PKW4 1024 aaPredicted RBP16.01■□□□□ 0.15
CDRT1-202ENST00000354433 CDCA8Q53HL2 280 aa16.01■□□□□ 0.15
CDRT1-202ENST00000354433 COG3Q96JB2 828 aa16.01■□□□□ 0.15
CDRT1-202ENST00000354433 CDCA7Q9BWT1 371 aaPredicted RBP16.01■□□□□ 0.15
CDRT1-202ENST00000354433 CARD10Q9BWT7 1032 aa16.01■□□□□ 0.15
CDRT1-202ENST00000354433 CCDC7Q96M83 1385 aa16.01■□□□□ 0.15
CDRT1-202ENST00000354433 ERBB3P21860 1342 aa16.01■□□□□ 0.15
CDRT1-202ENST00000354433 NLRP2Q9NX02 1062 aa16■□□□□ 0.15
CDRT1-202ENST00000354433 RGPD5Q99666 1765 aa16■□□□□ 0.15
CDRT1-202ENST00000354433 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
CDRT1-202ENST00000354433 LTN1O94822 1766 aa15.99■□□□□ 0.15
CDRT1-202ENST00000354433 WNK3Q9BYP7 1800 aa15.98■□□□□ 0.15
CDRT1-202ENST00000354433 ANKRD24Q8TF21 1146 aa15.98■□□□□ 0.15
CDRT1-202ENST00000354433 PARD3Q8TEW0 1356 aa15.97■□□□□ 0.15
CDRT1-202ENST00000354433 POLR3GLQ9BT43 218 aa15.97■□□□□ 0.15
CDRT1-202ENST00000354433 EXOC5O00471 708 aa15.96■□□□□ 0.15
CDRT1-202ENST00000354433 R3HDM1Q15032 1099 aaKnown RBP15.96■□□□□ 0.15
CDRT1-202ENST00000354433 DIEXFQ68CQ4 756 aaKnown RBP15.96■□□□□ 0.15
CDRT1-202ENST00000354433 LTV1Q96GA3 475 aaPredicted RBP15.96■□□□□ 0.15
CDRT1-202ENST00000354433 CAMKK2Q96RR4 588 aa15.96■□□□□ 0.15
CDRT1-202ENST00000354433 AMPHP49418 695 aa15.96■□□□□ 0.14
CDRT1-202ENST00000354433 GGNBP2Q9H3C7 697 aa15.96■□□□□ 0.14
CDRT1-202ENST00000354433 TNS2Q63HR2 1409 aa15.95■□□□□ 0.14
CDRT1-202ENST00000354433 MARCH10Q8NA82 808 aaPredicted RBP15.95■□□□□ 0.14
CDRT1-202ENST00000354433 IL2RBP14784 551 aa15.94■□□□□ 0.14
CDRT1-202ENST00000354433 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
CDRT1-202ENST00000354433 PEAK1Q9H792 1746 aa15.93■□□□□ 0.14
CDRT1-202ENST00000354433 FBLN1P23142 703 aa15.93■□□□□ 0.14
CDRT1-202ENST00000354433 IP6K1Q92551 441 aa15.93■□□□□ 0.14
CDRT1-202ENST00000354433 NSD3Q9BZ95 1437 aa15.92■□□□□ 0.14
CDRT1-202ENST00000354433 FYB1O15117 783 aa15.92■□□□□ 0.14
CDRT1-202ENST00000354433 RRS1Q15050 365 aaKnown RBP15.92■□□□□ 0.14
CDRT1-202ENST00000354433 NBPF14Q5TI25 921 aa15.92■□□□□ 0.14
CDRT1-202ENST00000354433 HOXC9P31274 260 aa15.91■□□□□ 0.14
CDRT1-202ENST00000354433 BCL11BQ9C0K0 894 aaPredicted RBP15.91■□□□□ 0.14
CDRT1-202ENST00000354433 EIF4G2P78344 907 aaKnown RBP eCLIP15.9■□□□□ 0.14
CDRT1-202ENST00000354433 RTL1A6NKG5 1358 aa15.9■□□□□ 0.14
CDRT1-202ENST00000354433 MYOM1P52179 1685 aa15.9■□□□□ 0.14
CDRT1-202ENST00000354433 RREB1Q92766 1687 aa15.9■□□□□ 0.14
CDRT1-202ENST00000354433 SMG6Q86US8 1419 aaKnown RBP15.89■□□□□ 0.13
CDRT1-202ENST00000354433 BCL9O00512 1426 aa15.88■□□□□ 0.13
CDRT1-202ENST00000354433 PTF1AQ7RTS3 328 aa15.88■□□□□ 0.13
CDRT1-202ENST00000354433 ACSBG1Q96GR2 724 aa15.88■□□□□ 0.13
CDRT1-202ENST00000354433 KIF20BQ96Q89 1820 aa15.88■□□□□ 0.13
CDRT1-202ENST00000354433 NUP188Q5SRE5 1749 aa15.88■□□□□ 0.13
CDRT1-202ENST00000354433 FAM208AQ9UK61 1670 aaKnown RBP15.88■□□□□ 0.13
CDRT1-202ENST00000354433 LRP5O75197 1615 aa15.87■□□□□ 0.13
CDRT1-202ENST00000354433 PLSCR1O15162 318 aa15.87■□□□□ 0.13
CDRT1-202ENST00000354433 HSPA5P11021 654 aaKnown RBP15.86■□□□□ 0.13
CDRT1-202ENST00000354433 CARD14Q9BXL6 1004 aa15.86■□□□□ 0.13
CDRT1-202ENST00000354433 SBF2Q86WG5 1849 aa15.86■□□□□ 0.13
CDRT1-202ENST00000354433 DDX54Q8TDD1 881 aaKnown RBP15.85■□□□□ 0.13
CDRT1-202ENST00000354433 FLT4P35916 1363 aa15.85■□□□□ 0.13
CDRT1-202ENST00000354433 CGNL1Q0VF96 1302 aa15.84■□□□□ 0.13
CDRT1-202ENST00000354433 KCNQ2O43526 872 aa15.84■□□□□ 0.13
CDRT1-202ENST00000354433 RGPD3A6NKT7 1758 aaPredicted RBP15.84■□□□□ 0.13
CDRT1-202ENST00000354433 RGPD4Q7Z3J3 1758 aa15.84■□□□□ 0.13
CDRT1-202ENST00000354433 PPM1GO15355 546 aaPredicted RBP15.83■□□□□ 0.13
CDRT1-202ENST00000354433 HSP90AB2PQ58FF8 381 aa15.83■□□□□ 0.12
CDRT1-202ENST00000354433 USHBP1Q8N6Y0 703 aa15.83■□□□□ 0.12
CDRT1-202ENST00000354433 NHSQ6T4R5 1651 aa15.82■□□□□ 0.12
CDRT1-202ENST00000354433 EMILIN1Q9Y6C2 1016 aa15.82■□□□□ 0.12
CDRT1-202ENST00000354433 MEGF6O75095 1541 aa15.82■□□□□ 0.12
CDRT1-202ENST00000354433 TXNRD1Q16881 649 aa15.81■□□□□ 0.12
CDRT1-202ENST00000354433 RAPGEF4Q8WZA2 1011 aa15.81■□□□□ 0.12
CDRT1-202ENST00000354433 SYTL4Q96C24 671 aaPredicted RBP15.81■□□□□ 0.12
CDRT1-202ENST00000354433 ANO8Q9HCE9 1232 aaPredicted RBP15.81■□□□□ 0.12
CDRT1-202ENST00000354433 INSRP06213 1382 aa15.81■□□□□ 0.12
CDRT1-202ENST00000354433 KIF24Q5T7B8 1368 aa15.81■□□□□ 0.12
CDRT1-202ENST00000354433 NBPF6Q5VWK0 638 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms