RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ARXQ96QS3 562 aa23.21■■□□□ 1.31
DDX55-202ENST00000354291 PEAK1Q9H792 1746 aa23.21■■□□□ 1.31
DDX55-202ENST00000354291 GPR162Q16538 588 aa23.2■■□□□ 1.3
DDX55-202ENST00000354291 SGIP1Q9BQI5 828 aa23.19■■□□□ 1.3
DDX55-202ENST00000354291 SBF2Q86WG5 1849 aa23.19■■□□□ 1.3
DDX55-202ENST00000354291 AATKQ6ZMQ8 1374 aa23.18■■□□□ 1.3
DDX55-202ENST00000354291 GIGYF1O75420 1035 aaPredicted RBP23.18■■□□□ 1.3
DDX55-202ENST00000354291 SRPK2P78362 688 aaKnown RBP23.18■■□□□ 1.3
DDX55-202ENST00000354291 STAC3Q96MF2 364 aa23.18■■□□□ 1.3
DDX55-202ENST00000354291 CDCA7Q9BWT1 371 aaPredicted RBP23.18■■□□□ 1.3
DDX55-202ENST00000354291 RGPD3A6NKT7 1758 aaPredicted RBP23.18■■□□□ 1.3
DDX55-202ENST00000354291 RGPD4Q7Z3J3 1758 aa23.18■■□□□ 1.3
DDX55-202ENST00000354291 AXIN2Q9Y2T1 843 aa23.17■■□□□ 1.3
DDX55-202ENST00000354291 EXOC5O00471 708 aa23.16■■□□□ 1.3
DDX55-202ENST00000354291 CHD4Q14839 1912 aa23.16■■□□□ 1.3
DDX55-202ENST00000354291 CSB-PGBD3P0DP91 1061 aa23.15■■□□□ 1.3
DDX55-202ENST00000354291 WDR17Q8IZU2 1322 aa23.14■■□□□ 1.3
DDX55-202ENST00000354291 CABP2Q9NPB3 220 aa23.14■■□□□ 1.29
DDX55-202ENST00000354291 LRRC37A3O60309 1634 aa23.14■■□□□ 1.29
DDX55-202ENST00000354291 PELP1Q8IZL8 1130 aaKnown RBP23.13■■□□□ 1.29
DDX55-202ENST00000354291 KLHL34Q8N239 644 aa23.13■■□□□ 1.29
DDX55-202ENST00000354291 PPIP5K1Q6PFW1 1433 aa23.13■■□□□ 1.29
DDX55-202ENST00000354291 ARHGEF28Q8N1W1 1705 aaKnown RBP23.13■■□□□ 1.29
DDX55-202ENST00000354291 BCL9O00512 1426 aa23.12■■□□□ 1.29
DDX55-202ENST00000354291 GOLGB1Q14789 3259 aaKnown RBP23.11■■□□□ 1.29
DDX55-202ENST00000354291 ACSBG1Q96GR2 724 aa23.11■■□□□ 1.29
DDX55-202ENST00000354291 CABP1Q9NZU7 370 aa23.11■■□□□ 1.29
DDX55-202ENST00000354291 SOX12O15370 315 aa23.1■■□□□ 1.29
DDX55-202ENST00000354291 CARD10Q9BWT7 1032 aa23.1■■□□□ 1.29
DDX55-202ENST00000354291 TOPAZ1Q8N9V7 1692 aa23.09■■□□□ 1.29
DDX55-202ENST00000354291 BRD4O60885 1362 aaPredicted RBP23.07■■□□□ 1.28
DDX55-202ENST00000354291 ARHGEF25Q86VW2 580 aa23.06■■□□□ 1.28
DDX55-202ENST00000354291 MAP3K5Q99683 1374 aa23.05■■□□□ 1.28
DDX55-202ENST00000354291 NBPF1Q3BBV0 1214 aa23.04■■□□□ 1.28
DDX55-202ENST00000354291 RAB3GAP2Q9H2M9 1393 aa23.03■■□□□ 1.28
DDX55-202ENST00000354291 USP6P35125 1406 aa23.03■■□□□ 1.28
DDX55-202ENST00000354291 ZNF827Q17R98 1081 aa23.03■■□□□ 1.28
DDX55-202ENST00000354291 POLD1P28340 1107 aa23.02■■□□□ 1.28
DDX55-202ENST00000354291 KCNH5Q8NCM2 988 aa23.01■■□□□ 1.27
DDX55-202ENST00000354291 SLIT3O75094 1523 aa23.01■■□□□ 1.27
DDX55-202ENST00000354291 CENPJQ9HC77 1338 aaPredicted RBP23.01■■□□□ 1.27
DDX55-202ENST00000354291 AKAP12Q02952 1782 aa23.01■■□□□ 1.27
DDX55-202ENST00000354291 CPSF1Q10570 1443 aaKnown RBP23■■□□□ 1.27
DDX55-202ENST00000354291 COL18A1P39060 1754 aa22.99■■□□□ 1.27
DDX55-202ENST00000354291 LRRC4BQ9NT99 713 aa22.99■■□□□ 1.27
DDX55-202ENST00000354291 NLGN2Q8NFZ4 835 aa22.97■■□□□ 1.27
DDX55-202ENST00000354291 SLC16A10Q8TF71 515 aa22.97■■□□□ 1.27
DDX55-202ENST00000354291 CCDC7Q96M83 1385 aa22.97■■□□□ 1.27
DDX55-202ENST00000354291 TTC21BQ7Z4L5 1316 aa22.95■■□□□ 1.26
DDX55-202ENST00000354291 KAT6BQ8WYB5 2073 aa22.95■■□□□ 1.26
DDX55-202ENST00000354291 NLRP2Q9NX02 1062 aa22.95■■□□□ 1.26
DDX55-202ENST00000354291 TNS2Q63HR2 1409 aa22.94■■□□□ 1.26
DDX55-202ENST00000354291 AKT1S1Q96B36 256 aa22.94■■□□□ 1.26
DDX55-202ENST00000354291 WNK3Q9BYP7 1800 aa22.94■■□□□ 1.26
DDX55-202ENST00000354291 GRIN3BO60391 1043 aa22.93■■□□□ 1.26
DDX55-202ENST00000354291 TFCP2L1Q9NZI6 479 aa22.93■■□□□ 1.26
DDX55-202ENST00000354291 ZNF692Q9BU19 519 aaPredicted RBP22.92■■□□□ 1.26
DDX55-202ENST00000354291 IL2RBP14784 551 aa22.91■■□□□ 1.26
DDX55-202ENST00000354291 YBX3P16989 372 aaKnown RBP eCLIP22.91■■□□□ 1.26
DDX55-202ENST00000354291 RGPD5Q99666 1765 aa22.91■■□□□ 1.26
DDX55-202ENST00000354291 PNPLA7Q6ZV29 1317 aa22.9■■□□□ 1.26
DDX55-202ENST00000354291 KCNQ4P56696 695 aa22.9■■□□□ 1.26
DDX55-202ENST00000354291 PIK3C2AO00443 1686 aa22.9■■□□□ 1.26
DDX55-202ENST00000354291 NHSQ6T4R5 1651 aa22.88■■□□□ 1.25
DDX55-202ENST00000354291 SLC27A3Q5K4L6 730 aa22.88■■□□□ 1.25
DDX55-202ENST00000354291 PAPPAQ13219 1627 aa22.88■■□□□ 1.25
DDX55-202ENST00000354291 EVC2Q86UK5 1308 aa22.87■■□□□ 1.25
DDX55-202ENST00000354291 MSH5O43196 834 aa22.87■■□□□ 1.25
DDX55-202ENST00000354291 SHANK3Q9BYB0 1731 aa22.87■■□□□ 1.25
DDX55-202ENST00000354291 TTC21AQ8NDW8 1320 aa22.86■■□□□ 1.25
DDX55-202ENST00000354291 DDX54Q8TDD1 881 aaKnown RBP22.86■■□□□ 1.25
DDX55-202ENST00000354291 GPBP1L1Q9HC44 474 aaPredicted RBP22.86■■□□□ 1.25
DDX55-202ENST00000354291 ZNF526Q8TF50 670 aaPredicted RBP22.84■■□□□ 1.25
DDX55-202ENST00000354291 SYTL4Q96C24 671 aaPredicted RBP22.84■■□□□ 1.25
DDX55-202ENST00000354291 ERBB3P21860 1342 aa22.83■■□□□ 1.25
DDX55-202ENST00000354291 ATP10DQ9P241 1426 aa22.83■■□□□ 1.25
DDX55-202ENST00000354291 TRPM1Q7Z4N2 1603 aa22.83■■□□□ 1.25
DDX55-202ENST00000354291 BTAF1O14981 1849 aa22.83■■□□□ 1.25
DDX55-202ENST00000354291 HSPA6P17066 643 aa22.83■■□□□ 1.25
DDX55-202ENST00000354291 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.82■■□□□ 1.24
DDX55-202ENST00000354291 ANKRD24Q8TF21 1146 aa22.82■■□□□ 1.24
DDX55-202ENST00000354291 KIAA1210Q9ULL0 1709 aa22.82■■□□□ 1.24
DDX55-202ENST00000354291 ABCC6O95255 1503 aa22.82■■□□□ 1.24
DDX55-202ENST00000354291 KTN1Q86UP2 1357 aaKnown RBP22.8■■□□□ 1.24
DDX55-202ENST00000354291 PRIM1P49642 420 aaKnown RBP22.8■■□□□ 1.24
DDX55-202ENST00000354291 NFAT5O94916 1531 aa22.79■■□□□ 1.24
DDX55-202ENST00000354291 QRICH2Q9H0J4 1663 aa22.79■■□□□ 1.24
DDX55-202ENST00000354291 MSL1Q68DK7 614 aa22.78■■□□□ 1.24
DDX55-202ENST00000354291 COL23A1Q86Y22 540 aaPredicted RBP22.77■■□□□ 1.24
DDX55-202ENST00000354291 NME9Q86XW9 330 aa22.75■■□□□ 1.23
DDX55-202ENST00000354291 CCNL1Q9UK58 526 aaPredicted RBP22.75■■□□□ 1.23
DDX55-202ENST00000354291 LTV1Q96GA3 475 aaPredicted RBP22.74■■□□□ 1.23
DDX55-202ENST00000354291 CD2APQ9Y5K6 639 aa22.71■■□□□ 1.23
DDX55-202ENST00000354291 WWC3Q9ULE0 1092 aa22.7■■□□□ 1.22
DDX55-202ENST00000354291 USP31Q70CQ4 1352 aa22.7■■□□□ 1.22
DDX55-202ENST00000354291 COL24A1Q17RW2 1714 aa22.7■■□□□ 1.22
DDX55-202ENST00000354291 QSER1Q2KHR3 1735 aa22.7■■□□□ 1.22
DDX55-202ENST00000354291 ANKRD36BQ8N2N9 1353 aa22.68■■□□□ 1.22
DDX55-202ENST00000354291 TMC1Q8TDI8 760 aa22.67■■□□□ 1.22
DDX55-202ENST00000354291 IP6K1Q92551 441 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms