RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
PKP1-202ENST00000352845 TULP2O00295 520 aa12.98□□□□□ -0.33
PKP1-202ENST00000352845 CHAF1AQ13111 956 aaPredicted RBP12.98□□□□□ -0.33
PKP1-202ENST00000352845 FKBP5Q13451 457 aaPredicted RBP12.98□□□□□ -0.33
PKP1-202ENST00000352845 SYCP1Q15431 976 aa12.98□□□□□ -0.33
PKP1-202ENST00000352845 PHF23Q9BUL5 403 aaPredicted RBP12.98□□□□□ -0.33
PKP1-202ENST00000352845 MLH3Q9UHC1 1453 aa12.98□□□□□ -0.33
PKP1-202ENST00000352845 ABCA6Q8N139 1617 aa12.98□□□□□ -0.33
PKP1-202ENST00000352845 AEBP2Q6ZN18 517 aaPredicted RBP12.98□□□□□ -0.33
PKP1-202ENST00000352845 ZBTB22O15209 634 aa12.97□□□□□ -0.33
PKP1-202ENST00000352845 YY1AP1Q9H869 796 aa12.97□□□□□ -0.33
PKP1-202ENST00000352845 LMBRD1Q9NUN5 540 aa12.97□□□□□ -0.33
PKP1-202ENST00000352845 KANK1Q14678 1352 aa12.97□□□□□ -0.33
PKP1-202ENST00000352845 GLI2P10070 1586 aa12.96□□□□□ -0.33
PKP1-202ENST00000352845 DIP2BQ9P265 1576 aa12.96□□□□□ -0.33
PKP1-202ENST00000352845 RICTORQ6R327 1708 aa12.96□□□□□ -0.33
PKP1-202ENST00000352845 CTIFO43310 598 aaKnown RBP12.96□□□□□ -0.34
PKP1-202ENST00000352845 U2AF2P26368 475 aaKnown RBP eCLIP12.96□□□□□ -0.34
PKP1-202ENST00000352845 SECISBP2LQ93073 1101 aaKnown RBP12.96□□□□□ -0.34
PKP1-202ENST00000352845 SLFN14P0C7P3 912 aa12.95□□□□□ -0.34
PKP1-202ENST00000352845 MCTP1Q6DN14 999 aa12.95□□□□□ -0.34
PKP1-202ENST00000352845 TSC1Q92574 1164 aa12.94□□□□□ -0.34
PKP1-202ENST00000352845 PPRC1Q5VV67 1664 aaKnown RBP12.94□□□□□ -0.34
PKP1-202ENST00000352845 KIF16BQ96L93 1317 aa12.94□□□□□ -0.34
PKP1-202ENST00000352845 RRP7AQ9Y3A4 280 aaKnown RBP12.94□□□□□ -0.34
PKP1-202ENST00000352845 TSPOAP1O95153 1857 aa12.94□□□□□ -0.34
PKP1-202ENST00000352845 EFCAB6Q5THR3 1501 aa12.94□□□□□ -0.34
PKP1-202ENST00000352845 MBD3O95983 291 aa12.93□□□□□ -0.34
PKP1-202ENST00000352845 MMP14P50281 582 aa12.93□□□□□ -0.34
PKP1-202ENST00000352845 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
PKP1-202ENST00000352845 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
PKP1-202ENST00000352845 MYO3AQ8NEV4 1616 aa12.93□□□□□ -0.34
PKP1-202ENST00000352845 NEURL4Q96JN8 1562 aa12.93□□□□□ -0.34
PKP1-202ENST00000352845 UGGT1Q9NYU2 1555 aa12.93□□□□□ -0.34
PKP1-202ENST00000352845 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
PKP1-202ENST00000352845 FAM184AQ8NB25 1140 aa12.93□□□□□ -0.34
PKP1-202ENST00000352845 YEATS2Q9ULM3 1422 aa12.93□□□□□ -0.34
PKP1-202ENST00000352845 DIP2CQ9Y2E4 1556 aa12.92□□□□□ -0.34
PKP1-202ENST00000352845 CYP2E1P05181 493 aaPredicted RBP12.92□□□□□ -0.34
PKP1-202ENST00000352845 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
PKP1-202ENST00000352845 BCL2L13Q9BXK5 485 aa12.92□□□□□ -0.34
PKP1-202ENST00000352845 CWC22Q9HCG8 908 aaKnown RBP12.92□□□□□ -0.34
PKP1-202ENST00000352845 TERF2Q15554 542 aa12.92□□□□□ -0.34
PKP1-202ENST00000352845 TCP11L2Q8N4U5 519 aa12.92□□□□□ -0.34
PKP1-202ENST00000352845 RUNDC1Q96C34 613 aa12.92□□□□□ -0.34
PKP1-202ENST00000352845 MORC2Q9Y6X9 1032 aaPredicted RBP12.92□□□□□ -0.34
PKP1-202ENST00000352845 CFAP65Q6ZU64 1925 aaKnown RBP12.92□□□□□ -0.34
PKP1-202ENST00000352845 MYOM2P54296 1465 aa12.91□□□□□ -0.34
PKP1-202ENST00000352845 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
PKP1-202ENST00000352845 JARID2Q92833 1246 aaPredicted RBP12.91□□□□□ -0.34
PKP1-202ENST00000352845 GEMIN8Q9NWZ8 242 aaKnown RBP12.91□□□□□ -0.34
PKP1-202ENST00000352845 DDX41Q9UJV9 622 aaKnown RBP12.91□□□□□ -0.34
PKP1-202ENST00000352845 IGSF3O75054 1194 aa12.9□□□□□ -0.34
PKP1-202ENST00000352845 TPM3P06753 285 aa12.9□□□□□ -0.34
PKP1-202ENST00000352845 GGT6Q6P531 493 aa12.9□□□□□ -0.34
PKP1-202ENST00000352845 WDR63Q8IWG1 891 aa12.9□□□□□ -0.34
PKP1-202ENST00000352845 GAS2L2Q8NHY3 880 aa12.9□□□□□ -0.34
PKP1-202ENST00000352845 KIF2CQ99661 725 aa12.9□□□□□ -0.34
PKP1-202ENST00000352845 TSPY26PQ9H489 355 aa12.9□□□□□ -0.34
PKP1-202ENST00000352845 LMTK2Q8IWU2 1503 aa12.9□□□□□ -0.34
PKP1-202ENST00000352845 IFT172Q9UG01 1749 aa12.9□□□□□ -0.34
PKP1-202ENST00000352845 SYAP1Q96A49 352 aaPredicted RBP12.9□□□□□ -0.34
PKP1-202ENST00000352845 CTNNA3Q9UI47 895 aa12.9□□□□□ -0.34
PKP1-202ENST00000352845 ADGRF5Q8IZF2 1346 aa12.9□□□□□ -0.34
PKP1-202ENST00000352845 PHF14O94880 888 aa12.89□□□□□ -0.35
PKP1-202ENST00000352845 SBNO2Q9Y2G9 1366 aa12.89□□□□□ -0.35
PKP1-202ENST00000352845 NSD3Q9BZ95 1437 aa12.89□□□□□ -0.35
PKP1-202ENST00000352845 CLGNO14967 610 aa12.89□□□□□ -0.35
PKP1-202ENST00000352845 MVPQ14764 893 aaKnown RBP12.89□□□□□ -0.35
PKP1-202ENST00000352845 NCBP3Q53F19 620 aaKnown RBP12.89□□□□□ -0.35
PKP1-202ENST00000352845 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
PKP1-202ENST00000352845 GPT2Q8TD30 523 aa12.89□□□□□ -0.35
PKP1-202ENST00000352845 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
PKP1-202ENST00000352845 SYCE3A1L190 88 aa12.88□□□□□ -0.35
PKP1-202ENST00000352845 RIOK3O14730 519 aaKnown RBP12.88□□□□□ -0.35
PKP1-202ENST00000352845 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
PKP1-202ENST00000352845 KRT222Q8N1A0 295 aa12.88□□□□□ -0.35
PKP1-202ENST00000352845 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
PKP1-202ENST00000352845 NPATQ14207 1427 aa12.87□□□□□ -0.35
PKP1-202ENST00000352845 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
PKP1-202ENST00000352845 TRIM6-TRIM34B2RNG4 842 aa12.87□□□□□ -0.35
PKP1-202ENST00000352845 PRPF40AO75400 957 aaKnown RBP12.87□□□□□ -0.35
PKP1-202ENST00000352845 CAPN2P17655 700 aa12.87□□□□□ -0.35
PKP1-202ENST00000352845 CHMP4AQ9BY43 222 aa12.87□□□□□ -0.35
PKP1-202ENST00000352845 TRIM34Q9BYJ4 488 aa12.87□□□□□ -0.35
PKP1-202ENST00000352845 TMEM63CQ9P1W3 806 aa12.87□□□□□ -0.35
PKP1-202ENST00000352845 ABCC3O15438 1527 aa12.87□□□□□ -0.35
PKP1-202ENST00000352845 ZC3H13Q5T200 1668 aaKnown RBP12.87□□□□□ -0.35
PKP1-202ENST00000352845 BMP2KLQ5H9B9 411 aa12.86□□□□□ -0.35
PKP1-202ENST00000352845 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
PKP1-202ENST00000352845 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
PKP1-202ENST00000352845 USP32Q8NFA0 1604 aa12.86□□□□□ -0.35
PKP1-202ENST00000352845 MROH2AA6NES4 1674 aa12.86□□□□□ -0.35
PKP1-202ENST00000352845 CD2BP2O95400 341 aaKnown RBP12.86□□□□□ -0.35
PKP1-202ENST00000352845 BCCIPQ9P287 314 aaKnown RBP eCLIP12.86□□□□□ -0.35
PKP1-202ENST00000352845 RABEP1Q15276 862 aa12.85□□□□□ -0.35
PKP1-202ENST00000352845 CTR9Q6PD62 1173 aa12.85□□□□□ -0.35
PKP1-202ENST00000352845 MORC1Q86VD1 984 aa12.85□□□□□ -0.35
PKP1-202ENST00000352845 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
PKP1-202ENST00000352845 KIF1BO60333 1816 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms