RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 MYO3AQ8NEV4 1616 aa13.06□□□□□ -0.32
SMPD4-201ENST00000351288 GNAI1P63096 354 aa13.06□□□□□ -0.32
SMPD4-201ENST00000351288 ZNF692Q9BU19 519 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-201ENST00000351288 STK31Q9BXU1 1019 aa13.06□□□□□ -0.32
SMPD4-201ENST00000351288 ZC3H13Q5T200 1668 aaKnown RBP13.05□□□□□ -0.32
SMPD4-201ENST00000351288 LMOD3Q0VAK6 560 aa13.05□□□□□ -0.32
SMPD4-201ENST00000351288 NFE2L2Q16236 605 aa13.04□□□□□ -0.32
SMPD4-201ENST00000351288 RSPH6AQ9H0K4 717 aa13.04□□□□□ -0.32
SMPD4-201ENST00000351288 DDX19BQ9UMR2 479 aa13.04□□□□□ -0.32
SMPD4-201ENST00000351288 PTPRMP28827 1452 aa13.04□□□□□ -0.32
SMPD4-201ENST00000351288 TBC1D2Q9BYX2 928 aa13.04□□□□□ -0.32
SMPD4-201ENST00000351288 USP35Q9P2H5 1018 aa13.04□□□□□ -0.32
SMPD4-201ENST00000351288 FKBP5Q13451 457 aaPredicted RBP13.03□□□□□ -0.32
SMPD4-201ENST00000351288 CD163L1Q9NR16 1453 aa13.03□□□□□ -0.32
SMPD4-201ENST00000351288 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
SMPD4-201ENST00000351288 OS9Q13438 667 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-201ENST00000351288 MBIPQ9NS73 344 aa13.02□□□□□ -0.33
SMPD4-201ENST00000351288 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
SMPD4-201ENST00000351288 BECN1Q14457 450 aa13.02□□□□□ -0.33
SMPD4-201ENST00000351288 TTC21BQ7Z4L5 1316 aa13.02□□□□□ -0.33
SMPD4-201ENST00000351288 HSPA2P54652 639 aa13.01□□□□□ -0.33
SMPD4-201ENST00000351288 NLRP2Q9NX02 1062 aa13.01□□□□□ -0.33
SMPD4-201ENST00000351288 TEFQ10587 303 aa13.01□□□□□ -0.33
SMPD4-201ENST00000351288 F6X3S4 739 aa13.01□□□□□ -0.33
SMPD4-201ENST00000351288 C22orf23Q9BZE7 217 aa13.01□□□□□ -0.33
SMPD4-201ENST00000351288 NSD2O96028 1365 aa13.01□□□□□ -0.33
SMPD4-201ENST00000351288 PPP6R1Q9UPN7 881 aa13□□□□□ -0.33
SMPD4-201ENST00000351288 EIF4A2Q14240 407 aaKnown RBP13□□□□□ -0.33
SMPD4-201ENST00000351288 TBC1D32Q96NH3 1257 aa13□□□□□ -0.33
SMPD4-201ENST00000351288 ZBTB40Q9NUA8 1239 aa13□□□□□ -0.33
SMPD4-201ENST00000351288 NEURL4Q96JN8 1562 aa13□□□□□ -0.33
SMPD4-201ENST00000351288 KIF16BQ96L93 1317 aa12.99□□□□□ -0.33
SMPD4-201ENST00000351288 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-201ENST00000351288 CCDC9Q9Y3X0 531 aaKnown RBP12.99□□□□□ -0.33
SMPD4-201ENST00000351288 NINLQ9Y2I6 1382 aa12.99□□□□□ -0.33
SMPD4-201ENST00000351288 VAMP4O75379 141 aa12.99□□□□□ -0.33
SMPD4-201ENST00000351288 AIMP1Q12904 312 aaKnown RBP12.99□□□□□ -0.33
SMPD4-201ENST00000351288 ALKQ9UM73 1620 aa12.98□□□□□ -0.33
SMPD4-201ENST00000351288 NOL8Q76FK4 1167 aaKnown RBP12.98□□□□□ -0.33
SMPD4-201ENST00000351288 DDX17Q92841 729 aaKnown RBP12.98□□□□□ -0.33
SMPD4-201ENST00000351288 PHF8Q9UPP1 1060 aa12.98□□□□□ -0.33
SMPD4-201ENST00000351288 CFAP74Q9C0B2 1584 aa12.98□□□□□ -0.33
SMPD4-201ENST00000351288 ANXA1P04083 346 aa12.97□□□□□ -0.33
SMPD4-201ENST00000351288 ATF3P18847 181 aa12.97□□□□□ -0.33
SMPD4-201ENST00000351288 IL13P35225 146 aa12.97□□□□□ -0.33
SMPD4-201ENST00000351288 TMEM131LA2VDJ0 1609 aa12.97□□□□□ -0.33
SMPD4-201ENST00000351288 PRR36Q9H6K5 1346 aa12.97□□□□□ -0.33
SMPD4-201ENST00000351288 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
SMPD4-201ENST00000351288 C16orf71Q8IYS4 520 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-201ENST00000351288 PUS7Q96PZ0 661 aaKnown RBP12.97□□□□□ -0.33
SMPD4-201ENST00000351288 COL3A1P02461 1466 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-201ENST00000351288 NLRP1Q9C000 1473 aa12.96□□□□□ -0.33
SMPD4-201ENST00000351288 PREX1Q8TCU6 1659 aa12.96□□□□□ -0.33
SMPD4-201ENST00000351288 RICTORQ6R327 1708 aa12.96□□□□□ -0.33
SMPD4-201ENST00000351288 CABLES1Q8TDN4 633 aa12.96□□□□□ -0.34
SMPD4-201ENST00000351288 LRRC59Q96AG4 307 aaKnown RBP12.96□□□□□ -0.34
SMPD4-201ENST00000351288 ORAI2Q96SN7 254 aa12.95□□□□□ -0.34
SMPD4-201ENST00000351288 LRRC7Q96NW7 1537 aa12.95□□□□□ -0.34
SMPD4-201ENST00000351288 ARHGAP31Q2M1Z3 1444 aa12.95□□□□□ -0.34
SMPD4-201ENST00000351288 KAT6BQ8WYB5 2073 aa12.95□□□□□ -0.34
SMPD4-201ENST00000351288 ARHGEF40Q8TER5 1519 aa12.95□□□□□ -0.34
SMPD4-201ENST00000351288 TRIM6-TRIM34B2RNG4 842 aa12.95□□□□□ -0.34
SMPD4-201ENST00000351288 C1orf141Q5JVX7 400 aa12.95□□□□□ -0.34
SMPD4-201ENST00000351288 CHD1LQ86WJ1 897 aa12.95□□□□□ -0.34
SMPD4-201ENST00000351288 TAOK2Q9UL54 1235 aa12.95□□□□□ -0.34
SMPD4-201ENST00000351288 MAP3K19Q56UN5 1328 aa12.95□□□□□ -0.34
SMPD4-201ENST00000351288 ROBO2Q9HCK4 1378 aa12.95□□□□□ -0.34
SMPD4-201ENST00000351288 TMEM2Q9UHN6 1383 aa12.95□□□□□ -0.34
SMPD4-201ENST00000351288 MRPL50Q8N5N7 158 aaKnown RBP12.95□□□□□ -0.34
SMPD4-201ENST00000351288 HSP90AB1P08238 724 aaKnown RBP12.94□□□□□ -0.34
SMPD4-201ENST00000351288 SIRT2Q8IXJ6 389 aa12.94□□□□□ -0.34
SMPD4-201ENST00000351288 ZBTB7BO15156 539 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-201ENST00000351288 SMARCA5O60264 1052 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-201ENST00000351288 MPRIPQ6WCQ1 1025 aa12.94□□□□□ -0.34
SMPD4-201ENST00000351288 MAP2P11137 1827 aaKnown RBP12.94□□□□□ -0.34
SMPD4-201ENST00000351288 API5Q9BZZ5 524 aaKnown RBP12.94□□□□□ -0.34
SMPD4-201ENST00000351288 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-201ENST00000351288 CHRNA2Q15822 529 aa12.93□□□□□ -0.34
SMPD4-201ENST00000351288 SMC5Q8IY18 1101 aa12.93□□□□□ -0.34
SMPD4-201ENST00000351288 OTUD7AQ8TE49 926 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-201ENST00000351288 A2ML1A8K2U0 1454 aa12.93□□□□□ -0.34
SMPD4-201ENST00000351288 ZNF530Q6P9A1 599 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-201ENST00000351288 RILPL2Q969X0 211 aa12.93□□□□□ -0.34
SMPD4-201ENST00000351288 CHMP4BQ9H444 224 aaKnown RBP12.93□□□□□ -0.34
SMPD4-201ENST00000351288 RIMBP3CA6NJZ7 1639 aa12.92□□□□□ -0.34
SMPD4-201ENST00000351288 RIMBP3BA6NNM3 1639 aa12.92□□□□□ -0.34
SMPD4-201ENST00000351288 RIMBP3Q9UFD9 1639 aa12.92□□□□□ -0.34
SMPD4-201ENST00000351288 ANO8Q9HCE9 1232 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-201ENST00000351288 MTHFSDQ2M296 383 aaKnown RBP12.92□□□□□ -0.34
SMPD4-201ENST00000351288 CLTCQ00610 1675 aaKnown RBP12.92□□□□□ -0.34
SMPD4-201ENST00000351288 NUCB1Q02818 461 aa12.92□□□□□ -0.34
SMPD4-201ENST00000351288 EYA1Q99502 592 aa12.92□□□□□ -0.34
SMPD4-201ENST00000351288 PNPLA6Q8IY17 1366 aa12.91□□□□□ -0.34
SMPD4-201ENST00000351288 CD2BP2O95400 341 aaKnown RBP12.91□□□□□ -0.34
SMPD4-201ENST00000351288 STRN4Q9NRL3 753 aa12.91□□□□□ -0.34
SMPD4-201ENST00000351288 CHMP3Q9Y3E7 222 aa12.91□□□□□ -0.34
SMPD4-201ENST00000351288 CPS1P31327 1500 aa12.91□□□□□ -0.34
SMPD4-201ENST00000351288 ZFYVE9O95405 1425 aa12.91□□□□□ -0.34
SMPD4-201ENST00000351288 CT47B1P0C2W7 299 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-201ENST00000351288 HDGFL1Q5TGJ6 251 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms