RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CD2BP2O95400 341 aaKnown RBP22.68■■□□□ 1.22
PTP4A3-202ENST00000349124 BRPF1P55201 1214 aaPredicted RBP22.68■■□□□ 1.22
PTP4A3-202ENST00000349124 GNAI1P63096 354 aa22.68■■□□□ 1.22
PTP4A3-202ENST00000349124 KRT24Q2M2I5 525 aa22.68■■□□□ 1.22
PTP4A3-202ENST00000349124 RBM25P49756 843 aaKnown RBP22.68■■□□□ 1.22
PTP4A3-202ENST00000349124 KIF2CQ99661 725 aa22.67■■□□□ 1.22
PTP4A3-202ENST00000349124 IFT57Q9NWB7 429 aa22.67■■□□□ 1.22
PTP4A3-202ENST00000349124 TRAK2O60296 914 aa22.67■■□□□ 1.22
PTP4A3-202ENST00000349124 XRCC6P12956 609 aaKnown RBP eCLIP22.66■■□□□ 1.222e-6■□□□□ 10.8
PTP4A3-202ENST00000349124 NUDT16Q96DE0 195 aaKnown RBP22.66■■□□□ 1.22
PTP4A3-202ENST00000349124 BMP2KLQ5H9B9 411 aa22.66■■□□□ 1.22
PTP4A3-202ENST00000349124 PANK2Q9BZ23 570 aa22.66■■□□□ 1.22
PTP4A3-202ENST00000349124 METP08581 1390 aa22.66■■□□□ 1.22
PTP4A3-202ENST00000349124 AEBP1Q8IUX7 1158 aa22.66■■□□□ 1.22
PTP4A3-202ENST00000349124 TBC1D9Q6ZT07 1266 aa22.65■■□□□ 1.22
PTP4A3-202ENST00000349124 NUTM2FA1L443 756 aa22.64■■□□□ 1.22
PTP4A3-202ENST00000349124 ARHGAP45Q92619 1136 aa22.64■■□□□ 1.22
PTP4A3-202ENST00000349124 ZNF428Q96B54 188 aa22.64■■□□□ 1.22
PTP4A3-202ENST00000349124 CLTCQ00610 1675 aaKnown RBP22.64■■□□□ 1.21
PTP4A3-202ENST00000349124 COG3Q96JB2 828 aa22.64■■□□□ 1.21
PTP4A3-202ENST00000349124 CFAP44Q96MT7 982 aa22.64■■□□□ 1.21
PTP4A3-202ENST00000349124 RIMS2Q9UQ26 1411 aa22.64■■□□□ 1.21
PTP4A3-202ENST00000349124 GCC1Q96CN9 775 aa22.63■■□□□ 1.21
PTP4A3-202ENST00000349124 ANKRD26Q9UPS8 1709 aa22.63■■□□□ 1.21
PTP4A3-202ENST00000349124 C16orf71Q8IYS4 520 aaPredicted RBP22.63■■□□□ 1.21
PTP4A3-202ENST00000349124 ABCC4O15439 1325 aa22.62■■□□□ 1.21
PTP4A3-202ENST00000349124 A2ML1A8K2U0 1454 aa22.62■■□□□ 1.21
PTP4A3-202ENST00000349124 DDIT3P35638 169 aa22.62■■□□□ 1.21
PTP4A3-202ENST00000349124 CALD1Q05682 793 aaKnown RBP22.61■■□□□ 1.21
PTP4A3-202ENST00000349124 RRAGDQ9NQL2 400 aaPredicted RBP22.61■■□□□ 1.21
PTP4A3-202ENST00000349124 GOLGA6L3A6NEY3 463 aa22.61■■□□□ 1.21
PTP4A3-202ENST00000349124 CPSF1Q10570 1443 aaKnown RBP22.61■■□□□ 1.21
PTP4A3-202ENST00000349124 HSP90AB1P08238 724 aaKnown RBP22.6■■□□□ 1.21
PTP4A3-202ENST00000349124 L1TD1Q5T7N2 865 aaKnown RBP22.6■■□□□ 1.21
PTP4A3-202ENST00000349124 FAM43AQ8N2R8 423 aa22.6■■□□□ 1.21
PTP4A3-202ENST00000349124 MAP2P11137 1827 aaKnown RBP22.6■■□□□ 1.21
PTP4A3-202ENST00000349124 FSD2A1L4K1 749 aa22.59■■□□□ 1.21
PTP4A3-202ENST00000349124 TNPO1Q92973 898 aaKnown RBP22.59■■□□□ 1.21
PTP4A3-202ENST00000349124 SNX21Q969T3 373 aa22.59■■□□□ 1.21
PTP4A3-202ENST00000349124 CCDC61Q9Y6R9 512 aa22.59■■□□□ 1.21
PTP4A3-202ENST00000349124 SOX12O15370 315 aa22.59■■□□□ 1.21
PTP4A3-202ENST00000349124 PTCH1Q13635 1447 aa22.59■■□□□ 1.21
PTP4A3-202ENST00000349124 ATP7BP35670 1465 aa22.59■■□□□ 1.21
PTP4A3-202ENST00000349124 PIK3R4Q99570 1358 aa22.59■■□□□ 1.21
PTP4A3-202ENST00000349124 SULT6B1Q6IMI4 303 aa22.59■■□□□ 1.21
PTP4A3-202ENST00000349124 MCM10Q7L590 875 aa22.59■■□□□ 1.21
PTP4A3-202ENST00000349124 CPS1P31327 1500 aa22.58■■□□□ 1.21
PTP4A3-202ENST00000349124 GSPT1P15170 499 aaKnown RBP22.58■■□□□ 1.21
PTP4A3-202ENST00000349124 CDC42BPGQ6DT37 1551 aa22.58■■□□□ 1.2
PTP4A3-202ENST00000349124 EDC4Q6P2E9 1401 aaKnown RBP22.58■■□□□ 1.2
PTP4A3-202ENST00000349124 APBB1O00213 710 aa22.58■■□□□ 1.2
PTP4A3-202ENST00000349124 KIF20BQ96Q89 1820 aa22.57■■□□□ 1.2
PTP4A3-202ENST00000349124 OTUD7AQ8TE49 926 aaPredicted RBP22.57■■□□□ 1.2
PTP4A3-202ENST00000349124 PRR36Q9H6K5 1346 aa22.57■■□□□ 1.2
PTP4A3-202ENST00000349124 PLEKHM2Q8IWE5 1019 aa22.55■■□□□ 1.2
PTP4A3-202ENST00000349124 API5Q9BZZ5 524 aaKnown RBP22.55■■□□□ 1.2
PTP4A3-202ENST00000349124 MIS18AQ9NYP9 233 aa22.55■■□□□ 1.2
PTP4A3-202ENST00000349124 EIF4A2Q14240 407 aaKnown RBP22.55■■□□□ 1.2
PTP4A3-202ENST00000349124 HSP90AA1P07900 732 aaKnown RBP22.54■■□□□ 1.2
PTP4A3-202ENST00000349124 NCOA3Q9Y6Q9 1424 aa22.54■■□□□ 1.2
PTP4A3-202ENST00000349124 SMARCA5O60264 1052 aaPredicted RBP22.53■■□□□ 1.2
PTP4A3-202ENST00000349124 CHMP4BQ9H444 224 aaKnown RBP22.53■■□□□ 1.2
PTP4A3-202ENST00000349124 LMOD3Q0VAK6 560 aa22.52■■□□□ 1.2
PTP4A3-202ENST00000349124 GAS2L2Q8NHY3 880 aa22.52■■□□□ 1.2
PTP4A3-202ENST00000349124 EIF5BO60841 1220 aaKnown RBP22.52■■□□□ 1.2
PTP4A3-202ENST00000349124 HSP90AB2PQ58FF8 381 aa22.52■■□□□ 1.2
PTP4A3-202ENST00000349124 AATKQ6ZMQ8 1374 aa22.52■■□□□ 1.2
PTP4A3-202ENST00000349124 DCTPP1Q9H773 170 aa22.51■■□□□ 1.19
PTP4A3-202ENST00000349124 CDK12Q9NYV4 1490 aaPredicted RBP22.5■■□□□ 1.19
PTP4A3-202ENST00000349124 DLC1Q96QB1 1528 aa22.5■■□□□ 1.19
PTP4A3-202ENST00000349124 DDX11L8A8MPP1 907 aa22.49■■□□□ 1.19
PTP4A3-202ENST00000349124 K7ELQ4 463 aaPredicted RBP22.49■■□□□ 1.19
PTP4A3-202ENST00000349124 CDC45O75419 566 aa22.49■■□□□ 1.19
PTP4A3-202ENST00000349124 RAB3GAP1Q15042 981 aa22.49■■□□□ 1.19
PTP4A3-202ENST00000349124 GAS2L3Q86XJ1 694 aa22.49■■□□□ 1.19
PTP4A3-202ENST00000349124 FOXO3O43524 673 aa22.48■■□□□ 1.19
PTP4A3-202ENST00000349124 SSFA2P28290 1259 aa22.48■■□□□ 1.19
PTP4A3-202ENST00000349124 MEIS3Q99687 375 aa22.48■■□□□ 1.19
PTP4A3-202ENST00000349124 INTS3Q68E01 1043 aaKnown RBP22.47■■□□□ 1.19
PTP4A3-202ENST00000349124 CHL1O00533 1208 aa22.47■■□□□ 1.19
PTP4A3-202ENST00000349124 CEP85Q6P2H3 762 aa22.45■■□□□ 1.19
PTP4A3-202ENST00000349124 TTC22Q5TAA0 569 aa22.45■■□□□ 1.18
PTP4A3-202ENST00000349124 ANKRD44Q8N8A2 993 aa22.45■■□□□ 1.18
PTP4A3-202ENST00000349124 PPP6R1Q9UPN7 881 aa22.45■■□□□ 1.18
PTP4A3-202ENST00000349124 RIMBP3CA6NJZ7 1639 aa22.45■■□□□ 1.18
PTP4A3-202ENST00000349124 RIMBP3BA6NNM3 1639 aa22.45■■□□□ 1.18
PTP4A3-202ENST00000349124 RIMBP3Q9UFD9 1639 aa22.45■■□□□ 1.18
PTP4A3-202ENST00000349124 ACEP12821 1306 aa22.45■■□□□ 1.18
PTP4A3-202ENST00000349124 TTC21BQ7Z4L5 1316 aa22.45■■□□□ 1.18
PTP4A3-202ENST00000349124 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.44■■□□□ 1.18
PTP4A3-202ENST00000349124 GRPEL1Q9HAV7 217 aa22.44■■□□□ 1.18
PTP4A3-202ENST00000349124 SLC4A2P04920 1241 aa22.44■■□□□ 1.18
PTP4A3-202ENST00000349124 ROBO2Q9HCK4 1378 aa22.44■■□□□ 1.18
PTP4A3-202ENST00000349124 F6X3S4 739 aa22.44■■□□□ 1.18
PTP4A3-202ENST00000349124 G2E3Q7L622 706 aa22.44■■□□□ 1.18
PTP4A3-202ENST00000349124 CIZ1Q9ULV3 898 aaPredicted RBP22.44■■□□□ 1.18
PTP4A3-202ENST00000349124 ESF1Q9H501 851 aaKnown RBP22.43■■□□□ 1.18
PTP4A3-202ENST00000349124 RGS12O14924 1447 aa22.42■■□□□ 1.18
PTP4A3-202ENST00000349124 SDSP20132 328 aa22.42■■□□□ 1.18
PTP4A3-202ENST00000349124 MRE11P49959 708 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms