RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 ARHGEF25Q86VW2 580 aa18.74■□□□□ 0.59
CLCC1-202ENST00000348264 NME9Q86XW9 330 aa18.74■□□□□ 0.59
CLCC1-202ENST00000348264 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
CLCC1-202ENST00000348264 KCNH5Q8NCM2 988 aa18.73■□□□□ 0.59
CLCC1-202ENST00000348264 AXIN2Q9Y2T1 843 aa18.73■□□□□ 0.59
CLCC1-202ENST00000348264 ABCC6O95255 1503 aa18.73■□□□□ 0.59
CLCC1-202ENST00000348264 NINLQ9Y2I6 1382 aa18.72■□□□□ 0.59
CLCC1-202ENST00000348264 LRRC37A3O60309 1634 aa18.72■□□□□ 0.59
CLCC1-202ENST00000348264 SF3B2Q13435 895 aaKnown RBP18.72■□□□□ 0.59
CLCC1-202ENST00000348264 TERF2IPQ9NYB0 399 aa18.72■□□□□ 0.59
CLCC1-202ENST00000348264 OVOS2A0A0J9YW53 1432 aa18.71■□□□□ 0.59
CLCC1-202ENST00000348264 OVOS2Q6IE36 1432 aa18.71■□□□□ 0.59
CLCC1-202ENST00000348264 TIMELESSQ9UNS1 1208 aa18.7■□□□□ 0.58
CLCC1-202ENST00000348264 THRAP3Q9Y2W1 955 aaKnown RBP18.7■□□□□ 0.58
CLCC1-202ENST00000348264 WDR17Q8IZU2 1322 aa18.69■□□□□ 0.58
CLCC1-202ENST00000348264 MYOM1P52179 1685 aa18.67■□□□□ 0.58
CLCC1-202ENST00000348264 SLC24A1O60721 1099 aa18.67■□□□□ 0.58
CLCC1-202ENST00000348264 TOM1L2Q6ZVM7 507 aa18.67■□□□□ 0.58
CLCC1-202ENST00000348264 DISP2A7MBM2 1401 aa18.66■□□□□ 0.58
CLCC1-202ENST00000348264 PEAK1Q9H792 1746 aa18.66■□□□□ 0.58
CLCC1-202ENST00000348264 BAG6P46379 1132 aa18.66■□□□□ 0.58
CLCC1-202ENST00000348264 TMF1P82094 1093 aa18.66■□□□□ 0.58
CLCC1-202ENST00000348264 ANKRD36BQ8N2N9 1353 aa18.66■□□□□ 0.58
CLCC1-202ENST00000348264 PDE3BQ13370 1112 aa18.65■□□□□ 0.58
CLCC1-202ENST00000348264 FAM196AQ6ZSG2 479 aa18.65■□□□□ 0.58
CLCC1-202ENST00000348264 SBF2Q86WG5 1849 aa18.63■□□□□ 0.57
CLCC1-202ENST00000348264 TRIM37O94972 964 aa18.63■□□□□ 0.57
CLCC1-202ENST00000348264 CSB-PGBD3P0DP91 1061 aa18.63■□□□□ 0.57
CLCC1-202ENST00000348264 EN1Q05925 392 aaPredicted RBP18.63■□□□□ 0.57
CLCC1-202ENST00000348264 CCER1Q8TC90 406 aaPredicted RBP18.62■□□□□ 0.57
CLCC1-202ENST00000348264 KIF20BQ96Q89 1820 aa18.62■□□□□ 0.57
CLCC1-202ENST00000348264 ERBB3P21860 1342 aa18.61■□□□□ 0.57
CLCC1-202ENST00000348264 CARD10Q9BWT7 1032 aa18.61■□□□□ 0.57
CLCC1-202ENST00000348264 OVOS2A0A0G2JMS6 1433 aa18.6■□□□□ 0.57
CLCC1-202ENST00000348264 RREB1Q92766 1687 aa18.6■□□□□ 0.57
CLCC1-202ENST00000348264 CCDC7Q96M83 1385 aa18.59■□□□□ 0.57
CLCC1-202ENST00000348264 DDB1Q16531 1140 aa18.59■□□□□ 0.57
CLCC1-202ENST00000348264 CDCA8Q53HL2 280 aa18.58■□□□□ 0.56
CLCC1-202ENST00000348264 COG3Q96JB2 828 aa18.58■□□□□ 0.56
CLCC1-202ENST00000348264 FAM208AQ9UK61 1670 aaKnown RBP18.57■□□□□ 0.56
CLCC1-202ENST00000348264 EZH2Q15910 746 aaKnown RBP18.57■□□□□ 0.56
CLCC1-202ENST00000348264 CDCA7Q9BWT1 371 aaPredicted RBP18.57■□□□□ 0.56
CLCC1-202ENST00000348264 NUP188Q5SRE5 1749 aa18.57■□□□□ 0.56
CLCC1-202ENST00000348264 TNS2Q63HR2 1409 aa18.57■□□□□ 0.56
CLCC1-202ENST00000348264 APBA3O96018 575 aa18.56■□□□□ 0.56
CLCC1-202ENST00000348264 ANKRD24Q8TF21 1146 aa18.56■□□□□ 0.56
CLCC1-202ENST00000348264 CAMKK2Q96RR4 588 aa18.56■□□□□ 0.56
CLCC1-202ENST00000348264 FBLN1P23142 703 aa18.55■□□□□ 0.56
CLCC1-202ENST00000348264 MARCH10Q8NA82 808 aaPredicted RBP18.55■□□□□ 0.56
CLCC1-202ENST00000348264 NLRP2Q9NX02 1062 aa18.55■□□□□ 0.56
CLCC1-202ENST00000348264 RGPD2P0DJD1 1756 aa18.55■□□□□ 0.56
CLCC1-202ENST00000348264 MAP3K19Q56UN5 1328 aa18.54■□□□□ 0.56
CLCC1-202ENST00000348264 FYB1O15117 783 aa18.54■□□□□ 0.56
CLCC1-202ENST00000348264 GGNBP2Q9H3C7 697 aa18.54■□□□□ 0.56
CLCC1-202ENST00000348264 PARD3Q8TEW0 1356 aa18.54■□□□□ 0.56
CLCC1-202ENST00000348264 RGPD3A6NKT7 1758 aaPredicted RBP18.53■□□□□ 0.56
CLCC1-202ENST00000348264 RGPD4Q7Z3J3 1758 aa18.53■□□□□ 0.56
CLCC1-202ENST00000348264 PSDA5PKW4 1024 aaPredicted RBP18.53■□□□□ 0.56
CLCC1-202ENST00000348264 IP6K1Q92551 441 aa18.53■□□□□ 0.56
CLCC1-202ENST00000348264 BCL9O00512 1426 aa18.52■□□□□ 0.56
CLCC1-202ENST00000348264 NSD3Q9BZ95 1437 aa18.52■□□□□ 0.56
CLCC1-202ENST00000348264 C11orf95C9JLR9 678 aaPredicted RBP18.52■□□□□ 0.56
CLCC1-202ENST00000348264 HOXC9P31274 260 aa18.51■□□□□ 0.55
CLCC1-202ENST00000348264 CARD14Q9BXL6 1004 aa18.51■□□□□ 0.55
CLCC1-202ENST00000348264 LRP5O75197 1615 aa18.51■□□□□ 0.55
CLCC1-202ENST00000348264 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
CLCC1-202ENST00000348264 LTV1Q96GA3 475 aaPredicted RBP18.5■□□□□ 0.55
CLCC1-202ENST00000348264 RTL1A6NKG5 1358 aa18.5■□□□□ 0.55
CLCC1-202ENST00000348264 EXOC5O00471 708 aa18.49■□□□□ 0.55
CLCC1-202ENST00000348264 HSPA5P11021 654 aaKnown RBP18.49■□□□□ 0.55
CLCC1-202ENST00000348264 IL2RBP14784 551 aa18.49■□□□□ 0.55
CLCC1-202ENST00000348264 RRS1Q15050 365 aaKnown RBP18.49■□□□□ 0.55
CLCC1-202ENST00000348264 NHSQ6T4R5 1651 aa18.49■□□□□ 0.55
CLCC1-202ENST00000348264 KAT6BQ8WYB5 2073 aa18.48■□□□□ 0.55
CLCC1-202ENST00000348264 AMPHP49418 695 aa18.48■□□□□ 0.55
CLCC1-202ENST00000348264 EIF4G2P78344 907 aaKnown RBP eCLIP18.48■□□□□ 0.55
CLCC1-202ENST00000348264 R3HDM1Q15032 1099 aaKnown RBP18.48■□□□□ 0.55
CLCC1-202ENST00000348264 SHANK3Q9BYB0 1731 aa18.46■□□□□ 0.55
CLCC1-202ENST00000348264 ANKRD26Q9UPS8 1709 aa18.46■□□□□ 0.55
CLCC1-202ENST00000348264 POLR3GLQ9BT43 218 aa18.46■□□□□ 0.55
CLCC1-202ENST00000348264 BCL11BQ9C0K0 894 aaPredicted RBP18.46■□□□□ 0.55
CLCC1-202ENST00000348264 MEGF6O75095 1541 aa18.44■□□□□ 0.54
CLCC1-202ENST00000348264 BTAF1O14981 1849 aa18.43■□□□□ 0.54
CLCC1-202ENST00000348264 FLT4P35916 1363 aa18.42■□□□□ 0.54
CLCC1-202ENST00000348264 MAP2P11137 1827 aaKnown RBP18.42■□□□□ 0.54
CLCC1-202ENST00000348264 PLSCR1O15162 318 aa18.42■□□□□ 0.54
CLCC1-202ENST00000348264 SMG6Q86US8 1419 aaKnown RBP18.41■□□□□ 0.54
CLCC1-202ENST00000348264 KCNQ2O43526 872 aa18.41■□□□□ 0.54
CLCC1-202ENST00000348264 CGNL1Q0VF96 1302 aa18.41■□□□□ 0.54
CLCC1-202ENST00000348264 INSRP06213 1382 aa18.41■□□□□ 0.54
CLCC1-202ENST00000348264 KIF24Q5T7B8 1368 aa18.41■□□□□ 0.54
CLCC1-202ENST00000348264 HSP90AB2PQ58FF8 381 aa18.4■□□□□ 0.54
CLCC1-202ENST00000348264 ACSBG1Q96GR2 724 aa18.4■□□□□ 0.54
CLCC1-202ENST00000348264 EMILIN1Q9Y6C2 1016 aa18.4■□□□□ 0.54
CLCC1-202ENST00000348264 NBPF6Q5VWK0 638 aa18.39■□□□□ 0.53
CLCC1-202ENST00000348264 USHBP1Q8N6Y0 703 aa18.39■□□□□ 0.53
CLCC1-202ENST00000348264 NBPF4Q96M43 638 aa18.39■□□□□ 0.53
CLCC1-202ENST00000348264 DOT1LQ8TEK3 1739 aa18.39■□□□□ 0.53
CLCC1-202ENST00000348264 PROM2Q8N271 834 aa18.38■□□□□ 0.53
CLCC1-202ENST00000348264 ANO8Q9HCE9 1232 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms