RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ENO4A6NNW6 628 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 LCA5Q86VQ0 697 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 TRERF1Q96PN7 1200 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 MTUS2Q5JR59 1369 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 SCRIBQ14160 1630 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 ITFG2Q969R8 447 aa4.45□□□□□ -1.7
SYNE2-202ENST00000344113 PPFIBP2Q8ND30 876 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 A1CFQ9NQ94 594 aaKnown RBP4.44□□□□□ -1.7
SYNE2-202ENST00000344113 POLA1P09884 1462 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-202ENST00000344113 BHMTQ93088 406 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 ZKSCAN5Q9Y2L8 839 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 ICE2Q659A1 982 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 KCTD17Q8N5Z5 321 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 PMFBP1Q8TBY8 1022 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 PPP1R14BQ96C90 147 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 SEPT11Q9NVA2 429 aaKnown RBP4.44□□□□□ -1.7
SYNE2-202ENST00000344113 KIF7Q2M1P5 1343 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 FAM9BQ8IZU0 186 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 RPAP2Q8IXW5 612 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-202ENST00000344113 UQCRHLA0A096LP55 91 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 UQCRHP07919 91 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 IPO8O15397 1037 aaKnown RBP4.44□□□□□ -1.7
SYNE2-202ENST00000344113 PRPHP41219 470 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 DNAJC8O75937 253 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-202ENST00000344113 EIF4G2P78344 907 aaKnown RBP eCLIP4.44□□□□□ -1.7
SYNE2-202ENST00000344113 KLHL40Q2TBA0 621 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 DDX46Q7L014 1031 aaKnown RBP4.44□□□□□ -1.7
SYNE2-202ENST00000344113 PPP1R15AO75807 674 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-202ENST00000344113 CCDC170Q8IYT3 715 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 CCDC85AQ96PX6 553 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-202ENST00000344113 MOV10L1Q9BXT6 1211 aaKnown RBP4.44□□□□□ -1.7
SYNE2-202ENST00000344113 IFT57Q9NWB7 429 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 CCDC7Q96M83 1385 aa4.44□□□□□ -1.7
SYNE2-202ENST00000344113 TRAF1Q13077 416 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 CXorf38Q8TB03 319 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 FBXW7Q969H0 707 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 SGSM2O43147 1006 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 PPP1R12BO60237 982 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-202ENST00000344113 SOX12O15370 315 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 REC8O95072 547 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 GNL2Q13823 731 aaKnown RBP4.43□□□□□ -1.7
SYNE2-202ENST00000344113 CCDC175P0C221 793 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 GUCY2CP25092 1073 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 AP1ARQ63HQ0 302 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 SAFB2Q14151 953 aaKnown RBP eCLIP4.43□□□□□ -1.7
SYNE2-202ENST00000344113 BRAPQ7Z569 592 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 CNPY4Q8N129 248 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 HOMER3Q9NSC5 361 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 MYO15BQ96JP2 1530 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 MCM4P33991 863 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 JMYQ8N9B5 988 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 ZFYP08048 801 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-202ENST00000344113 TTC31Q49AM3 519 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-202ENST00000344113 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.43□□□□□ -1.7
SYNE2-202ENST00000344113 PSD3Q9NYI0 1048 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 RWDD2BP57060 319 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 MAGEA8P43361 318 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 NOL8Q76FK4 1167 aaKnown RBP4.43□□□□□ -1.7
SYNE2-202ENST00000344113 NLRP5P59047 1200 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 TRIM29Q14134 588 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 NOL10Q9BSC4 688 aaKnown RBP4.43□□□□□ -1.7
SYNE2-202ENST00000344113 IGSF3O75054 1194 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 RNF8O76064 485 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 DTNBP1Q96EV8 351 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 TUBA8Q9NY65 449 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-202ENST00000344113 FAM76AQ8TAV0 307 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 HOMER1Q86YM7 354 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 SUGP1Q8IWZ8 645 aaKnown RBP4.43□□□□□ -1.7
SYNE2-202ENST00000344113 TRAK2O60296 914 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 MRPS25P82663 173 aaKnown RBP4.43□□□□□ -1.7
SYNE2-202ENST00000344113 DBN1Q16643 649 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 CUX2O14529 1486 aa4.43□□□□□ -1.7
SYNE2-202ENST00000344113 MTA1Q13330 715 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 POTEDQ86YR6 584 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 TPX2Q9ULW0 747 aaKnown RBP4.42□□□□□ -1.7
SYNE2-202ENST00000344113 UHRF1BP1LA0JNW5 1464 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 MAGEC2Q9UBF1 373 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-202ENST00000344113 SYNPO2Q9UMS6 1093 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 IQCGQ9H095 443 aaKnown RBP4.42□□□□□ -1.7
SYNE2-202ENST00000344113 RWDD1Q9H446 243 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-202ENST00000344113 ICA1Q05084 483 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 EGFL6Q8IUX8 553 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 CT47B1P0C2W7 299 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-202ENST00000344113 CEP135Q66GS9 1140 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 CEP162Q5TB80 1403 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 HDAC7Q8WUI4 952 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 LUC7LQ9NQ29 371 aaKnown RBP4.42□□□□□ -1.7
SYNE2-202ENST00000344113 KIAA1107Q9UPP5 1409 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 TULP2O00295 520 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 MAP3K7CLP57077 242 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 CCDC6Q16204 474 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 TSPAN18Q96SJ8 248 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 GOPCQ9HD26 462 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 GCOM1H8Y6P7 765 aaPredicted RBP4.42□□□□□ -1.7
SYNE2-202ENST00000344113 MYZAPP0CAP1 466 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 P3H4Q92791 437 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 CBX1P83916 185 aa4.42□□□□□ -1.7
SYNE2-202ENST00000344113 DDX49Q9Y6V7 483 aaKnown RBP4.42□□□□□ -1.7
SYNE2-202ENST00000344113 MAP2K2P36507 400 aa4.41□□□□□ -1.7
SYNE2-202ENST00000344113 NAA25Q14CX7 972 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms