RNA–Protein interactions for RNA: ENST00000343968.8

MS4A4A-202, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 1,676 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-202ENST00000343968 ABCC6O95255 1503 aa18.3■□□□□ 0.52
MS4A4A-202ENST00000343968 EIF4A2Q14240 407 aaKnown RBP18.29■□□□□ 0.52
MS4A4A-202ENST00000343968 HSP90AB2PQ58FF8 381 aa18.29■□□□□ 0.52
MS4A4A-202ENST00000343968 RUNDC1Q96C34 613 aa18.29■□□□□ 0.52
MS4A4A-202ENST00000343968 PNNQ9H307 717 aaKnown RBP18.29■□□□□ 0.52
MS4A4A-202ENST00000343968 FCHSD2O94868 740 aa18.28■□□□□ 0.52
MS4A4A-202ENST00000343968 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
MS4A4A-202ENST00000343968 PLEKHF1Q96S99 279 aa18.28■□□□□ 0.52
MS4A4A-202ENST00000343968 CPDO75976 1380 aa18.27■□□□□ 0.51
MS4A4A-202ENST00000343968 CERKQ8TCT0 537 aa18.26■□□□□ 0.51
MS4A4A-202ENST00000343968 LRRC59Q96AG4 307 aaKnown RBP18.26■□□□□ 0.51
MS4A4A-202ENST00000343968 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
MS4A4A-202ENST00000343968 COL22A1Q8NFW1 1626 aaPredicted RBP18.25■□□□□ 0.51
MS4A4A-202ENST00000343968 ABCA3Q99758 1704 aa18.25■□□□□ 0.51
MS4A4A-202ENST00000343968 CCDC146Q8IYE0 955 aa18.25■□□□□ 0.51
MS4A4A-202ENST00000343968 COL18A1P39060 1754 aa18.24■□□□□ 0.51
MS4A4A-202ENST00000343968 COL16A1Q07092 1604 aaPredicted RBP18.24■□□□□ 0.51
MS4A4A-202ENST00000343968 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
MS4A4A-202ENST00000343968 APAF1O14727 1248 aa18.23■□□□□ 0.51
MS4A4A-202ENST00000343968 KDRP35968 1356 aa18.22■□□□□ 0.51
MS4A4A-202ENST00000343968 ZNF521Q96K83 1311 aa18.22■□□□□ 0.51
MS4A4A-202ENST00000343968 PHLPP1O60346 1717 aa18.22■□□□□ 0.51
MS4A4A-202ENST00000343968 PDE3BQ13370 1112 aa18.22■□□□□ 0.51
MS4A4A-202ENST00000343968 UBAP1LF5GYI3 381 aa18.22■□□□□ 0.51
MS4A4A-202ENST00000343968 CCDC27Q2M243 656 aa18.21■□□□□ 0.51
MS4A4A-202ENST00000343968 TCP11L2Q8N4U5 519 aa18.21■□□□□ 0.51
MS4A4A-202ENST00000343968 PHF23Q9BUL5 403 aaPredicted RBP18.21■□□□□ 0.51
MS4A4A-202ENST00000343968 CABLES1Q8TDN4 633 aa18.2■□□□□ 0.5
MS4A4A-202ENST00000343968 NCAPD2Q15021 1401 aa18.2■□□□□ 0.5
MS4A4A-202ENST00000343968 EYA1Q99502 592 aa18.19■□□□□ 0.5
MS4A4A-202ENST00000343968 CAMTA1Q9Y6Y1 1673 aa18.19■□□□□ 0.5
MS4A4A-202ENST00000343968 PRKAR2BP31323 418 aa18.18■□□□□ 0.5
MS4A4A-202ENST00000343968 ZC3H6P61129 1189 aaKnown RBP18.18■□□□□ 0.5
MS4A4A-202ENST00000343968 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
MS4A4A-202ENST00000343968 HMOX1P09601 288 aa18.18■□□□□ 0.5
MS4A4A-202ENST00000343968 KIAA0232Q92628 1395 aa18.18■□□□□ 0.5
MS4A4A-202ENST00000343968 SULT6B1Q6IMI4 303 aa18.17■□□□□ 0.5
MS4A4A-202ENST00000343968 AXIN2Q9Y2T1 843 aa18.17■□□□□ 0.5
MS4A4A-202ENST00000343968 LMO7Q8WWI1 1683 aa18.16■□□□□ 0.5
MS4A4A-202ENST00000343968 TMPOP42166 694 aaKnown RBP18.16■□□□□ 0.5
MS4A4A-202ENST00000343968 PIP4K2BP78356 416 aa18.16■□□□□ 0.5
MS4A4A-202ENST00000343968 RGPD5Q99666 1765 aa18.16■□□□□ 0.5
MS4A4A-202ENST00000343968 NEFMP07197 916 aa18.15■□□□□ 0.5
MS4A4A-202ENST00000343968 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
MS4A4A-202ENST00000343968 ERBB3P21860 1342 aa18.15■□□□□ 0.5
MS4A4A-202ENST00000343968 AEBP1Q8IUX7 1158 aa18.15■□□□□ 0.5
MS4A4A-202ENST00000343968 ANKRD24Q8TF21 1146 aa18.15■□□□□ 0.5
MS4A4A-202ENST00000343968 WWC1Q8IX03 1113 aa18.14■□□□□ 0.49
MS4A4A-202ENST00000343968 SALL2Q9Y467 1007 aaPredicted RBP18.14■□□□□ 0.49
MS4A4A-202ENST00000343968 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
MS4A4A-202ENST00000343968 PLEKHG5O94827 1062 aa18.13■□□□□ 0.49
MS4A4A-202ENST00000343968 NFE2L2Q16236 605 aa18.13■□□□□ 0.49
MS4A4A-202ENST00000343968 PHACTR3Q96KR7 559 aa18.13■□□□□ 0.49
MS4A4A-202ENST00000343968 SENP3-EIF4A1A0A087X0R7 540 aa18.12■□□□□ 0.49
MS4A4A-202ENST00000343968 ZBTB7CA1YPR0 619 aa18.12■□□□□ 0.49
MS4A4A-202ENST00000343968 NBPF6Q5VWK0 638 aa18.12■□□□□ 0.49
MS4A4A-202ENST00000343968 LTV1Q96GA3 475 aaPredicted RBP18.12■□□□□ 0.49
MS4A4A-202ENST00000343968 NBPF4Q96M43 638 aa18.12■□□□□ 0.49
MS4A4A-202ENST00000343968 WDR63Q8IWG1 891 aa18.12■□□□□ 0.49
MS4A4A-202ENST00000343968 PRDM11Q9NQV5 511 aa18.12■□□□□ 0.49
MS4A4A-202ENST00000343968 RGPD2P0DJD1 1756 aa18.11■□□□□ 0.49
MS4A4A-202ENST00000343968 PLEKHG2Q9H7P9 1386 aa18.11■□□□□ 0.49
MS4A4A-202ENST00000343968 HAP1P54257 671 aaPredicted RBP18.11■□□□□ 0.49
MS4A4A-202ENST00000343968 GOLGA2Q08379 1002 aa18.11■□□□□ 0.49
MS4A4A-202ENST00000343968 TRMT2AQ8IZ69 625 aaKnown RBP18.1■□□□□ 0.49
MS4A4A-202ENST00000343968 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
MS4A4A-202ENST00000343968 RRP7AQ9Y3A4 280 aaKnown RBP18.1■□□□□ 0.49
MS4A4A-202ENST00000343968 RIPK4P57078 832 aa18.09■□□□□ 0.49
MS4A4A-202ENST00000343968 CHRNA2Q15822 529 aa18.09■□□□□ 0.49
MS4A4A-202ENST00000343968 COL14A1Q05707 1796 aaKnown RBP18.09■□□□□ 0.49
MS4A4A-202ENST00000343968 COL5A2P05997 1499 aaPredicted RBP18.08■□□□□ 0.49
MS4A4A-202ENST00000343968 DLG5Q8TDM6 1919 aa18.08■□□□□ 0.48
MS4A4A-202ENST00000343968 SLFN5Q08AF3 891 aa18.08■□□□□ 0.48
MS4A4A-202ENST00000343968 NEUROD2Q15784 382 aa18.08■□□□□ 0.48
MS4A4A-202ENST00000343968 FAM83GA6ND36 823 aa18.07■□□□□ 0.48
MS4A4A-202ENST00000343968 E9PSI1 815 aa18.07■□□□□ 0.48
MS4A4A-202ENST00000343968 LMOD3Q0VAK6 560 aa18.07■□□□□ 0.48
MS4A4A-202ENST00000343968 CDCA7LQ96GN5 454 aa18.07■□□□□ 0.48
MS4A4A-202ENST00000343968 IL16Q14005 1332 aa18.07■□□□□ 0.48
MS4A4A-202ENST00000343968 JCADQ9P266 1359 aa18.07■□□□□ 0.48
MS4A4A-202ENST00000343968 DUSP27Q5VZP5 1158 aa18.06■□□□□ 0.48
MS4A4A-202ENST00000343968 GAS2L2Q8NHY3 880 aa18.06■□□□□ 0.48
MS4A4A-202ENST00000343968 WDR17Q8IZU2 1322 aa18.06■□□□□ 0.48
MS4A4A-202ENST00000343968 USHBP1Q8N6Y0 703 aa18.04■□□□□ 0.48
MS4A4A-202ENST00000343968 HTATSF1O43719 755 aaKnown RBP18.03■□□□□ 0.48
MS4A4A-202ENST00000343968 MTHFSDQ2M296 383 aaKnown RBP18.03■□□□□ 0.48
MS4A4A-202ENST00000343968 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
MS4A4A-202ENST00000343968 CALD1Q05682 793 aaKnown RBP18.02■□□□□ 0.47
MS4A4A-202ENST00000343968 AMOTQ4VCS5 1084 aa18.02■□□□□ 0.47
MS4A4A-202ENST00000343968 CSB-PGBD3P0DP91 1061 aa18.01■□□□□ 0.47
MS4A4A-202ENST00000343968 NLRP2Q9NX02 1062 aa18.01■□□□□ 0.47
MS4A4A-202ENST00000343968 SPATA31A6Q5VVP1 1343 aa18■□□□□ 0.47
MS4A4A-202ENST00000343968 CARD10Q9BWT7 1032 aa18■□□□□ 0.47
MS4A4A-202ENST00000343968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18■□□□□ 0.47
MS4A4A-202ENST00000343968 PLEKHO1Q53GL0 409 aaPredicted RBP17.99■□□□□ 0.47
MS4A4A-202ENST00000343968 PLCH1Q4KWH8 1693 aa17.99■□□□□ 0.47
MS4A4A-202ENST00000343968 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
MS4A4A-202ENST00000343968 BTG4Q9NY30 223 aa17.99■□□□□ 0.47
MS4A4A-202ENST00000343968 NWD2Q9ULI1 1742 aa17.99■□□□□ 0.47
MS4A4A-202ENST00000343968 NRAPQ86VF7 1730 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms