RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 LAMB1P07942 1786 aa10.54□□□□□ -0.72
ZNF540-202ENST00000343599 RGL2O15211 777 aa10.54□□□□□ -0.72
ZNF540-202ENST00000343599 NBPF8Q3BBV2 869 aa10.54□□□□□ -0.72
ZNF540-202ENST00000343599 NBPF14Q5TI25 921 aa10.54□□□□□ -0.72
ZNF540-202ENST00000343599 KCNH5Q8NCM2 988 aa10.54□□□□□ -0.72
ZNF540-202ENST00000343599 RANGAP1P46060 587 aaPredicted RBP10.53□□□□□ -0.72
ZNF540-202ENST00000343599 EDC4Q6P2E9 1401 aaKnown RBP10.53□□□□□ -0.72
ZNF540-202ENST00000343599 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
ZNF540-202ENST00000343599 MAP3K19Q56UN5 1328 aa10.53□□□□□ -0.72
ZNF540-202ENST00000343599 SEPT12Q8IYM1 358 aa10.52□□□□□ -0.72
ZNF540-202ENST00000343599 ZC3H4Q9UPT8 1303 aaKnown RBP10.52□□□□□ -0.73
ZNF540-202ENST00000343599 SLC27A3Q5K4L6 730 aa10.52□□□□□ -0.73
ZNF540-202ENST00000343599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.52□□□□□ -0.73
ZNF540-202ENST00000343599 TOGARAM1Q9Y4F4 1720 aa10.51□□□□□ -0.73
ZNF540-202ENST00000343599 MPHOSPH9Q99550 1183 aa10.51□□□□□ -0.73
ZNF540-202ENST00000343599 ADGRF5Q8IZF2 1346 aa10.51□□□□□ -0.73
ZNF540-202ENST00000343599 C8orf37Q96NL8 207 aa10.5□□□□□ -0.73
ZNF540-202ENST00000343599 C14orf37Q86TY3 774 aa10.49□□□□□ -0.73
ZNF540-202ENST00000343599 CARD10Q9BWT7 1032 aa10.49□□□□□ -0.73
ZNF540-202ENST00000343599 ITGB4P16144 1822 aa10.49□□□□□ -0.73
ZNF540-202ENST00000343599 DICER1Q9UPY3 1922 aaKnown RBP10.49□□□□□ -0.73
ZNF540-202ENST00000343599 SGIP1Q9BQI5 828 aa10.48□□□□□ -0.73
ZNF540-202ENST00000343599 PLEKHH1Q9ULM0 1364 aa10.48□□□□□ -0.73
ZNF540-202ENST00000343599 PPIP5K1Q6PFW1 1433 aa10.48□□□□□ -0.73
ZNF540-202ENST00000343599 UBR2Q8IWV8 1755 aa10.47□□□□□ -0.73
ZNF540-202ENST00000343599 KCNQ2O43526 872 aa10.47□□□□□ -0.73
ZNF540-202ENST00000343599 WDR90Q96KV7 1748 aa10.47□□□□□ -0.73
ZNF540-202ENST00000343599 TCP11L2Q8N4U5 519 aa10.47□□□□□ -0.73
ZNF540-202ENST00000343599 WDR17Q8IZU2 1322 aa10.47□□□□□ -0.73
ZNF540-202ENST00000343599 CD163L1Q9NR16 1453 aa10.47□□□□□ -0.73
ZNF540-202ENST00000343599 DCAF8L1A6NGE4 600 aa10.46□□□□□ -0.73
ZNF540-202ENST00000343599 DIEXFQ68CQ4 756 aaKnown RBP10.46□□□□□ -0.73
ZNF540-202ENST00000343599 FLAD1Q8NFF5 587 aa10.46□□□□□ -0.73
ZNF540-202ENST00000343599 ORAI2Q96SN7 254 aa10.46□□□□□ -0.73
ZNF540-202ENST00000343599 CCDC61Q9Y6R9 512 aa10.46□□□□□ -0.73
ZNF540-202ENST00000343599 MRC1P22897 1456 aa10.45□□□□□ -0.74
ZNF540-202ENST00000343599 C4BP0C0L5 1744 aa10.45□□□□□ -0.74
ZNF540-202ENST00000343599 ZNF326Q5BKZ1 582 aaKnown RBP10.45□□□□□ -0.74
ZNF540-202ENST00000343599 NLRP13Q86W25 1043 aa10.45□□□□□ -0.74
ZNF540-202ENST00000343599 PRR36Q9H6K5 1346 aa10.43□□□□□ -0.74
ZNF540-202ENST00000343599 ESCO1Q5FWF5 840 aa10.43□□□□□ -0.74
ZNF540-202ENST00000343599 FAM83GA6ND36 823 aa10.43□□□□□ -0.74
ZNF540-202ENST00000343599 SPON1Q9HCB6 807 aa10.43□□□□□ -0.74
ZNF540-202ENST00000343599 FAM50AQ14320 339 aaKnown RBP10.42□□□□□ -0.74
ZNF540-202ENST00000343599 CLSPNQ9HAW4 1339 aa10.42□□□□□ -0.74
ZNF540-202ENST00000343599 SIPA1L3O60292 1781 aaPredicted RBP10.42□□□□□ -0.74
ZNF540-202ENST00000343599 TMEM132AQ24JP5 1023 aa10.42□□□□□ -0.74
ZNF540-202ENST00000343599 TSHZ2Q9NRE2 1034 aa10.42□□□□□ -0.74
ZNF540-202ENST00000343599 C4AP0C0L4 1744 aa10.42□□□□□ -0.74
ZNF540-202ENST00000343599 TRIM52Q96A61 297 aa10.42□□□□□ -0.74
ZNF540-202ENST00000343599 NUTM2BA6NNL0 878 aaPredicted RBP10.41□□□□□ -0.74
ZNF540-202ENST00000343599 NUTM2EB1AL46 878 aaPredicted RBP10.41□□□□□ -0.74
ZNF540-202ENST00000343599 NUTM2DQ5VT03 806 aaPredicted RBP10.41□□□□□ -0.74
ZNF540-202ENST00000343599 NUTM2AQ8IVF1 878 aaPredicted RBP10.41□□□□□ -0.74
ZNF540-202ENST00000343599 BCORQ6W2J9 1755 aa10.41□□□□□ -0.74
ZNF540-202ENST00000343599 MTFR1LQ9H019 292 aa10.41□□□□□ -0.74
ZNF540-202ENST00000343599 SCN11AQ9UI33 1791 aa10.4□□□□□ -0.74
ZNF540-202ENST00000343599 INSRP06213 1382 aa10.4□□□□□ -0.74
ZNF540-202ENST00000343599 ANKRD36BQ8N2N9 1353 aa10.4□□□□□ -0.74
ZNF540-202ENST00000343599 KDM6AO15550 1401 aaPredicted RBP10.4□□□□□ -0.75
ZNF540-202ENST00000343599 RBM33Q96EV2 1170 aaKnown RBP10.39□□□□□ -0.75
ZNF540-202ENST00000343599 VIRMAQ69YN4 1812 aaKnown RBP10.39□□□□□ -0.75
ZNF540-202ENST00000343599 SCN7AQ01118 1682 aa10.39□□□□□ -0.75
ZNF540-202ENST00000343599 TONSLQ96HA7 1378 aa10.39□□□□□ -0.75
ZNF540-202ENST00000343599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.39□□□□□ -0.75
ZNF540-202ENST00000343599 PDZRN3Q9UPQ7 1066 aa10.39□□□□□ -0.75
ZNF540-202ENST00000343599 CHIC2Q9UKJ5 165 aa10.38□□□□□ -0.75
ZNF540-202ENST00000343599 TJP1Q07157 1748 aa10.37□□□□□ -0.75
ZNF540-202ENST00000343599 ARHGEF25Q86VW2 580 aa10.37□□□□□ -0.75
ZNF540-202ENST00000343599 EVC2Q86UK5 1308 aa10.36□□□□□ -0.75
ZNF540-202ENST00000343599 UBE2Q2Q8WVN8 375 aa10.36□□□□□ -0.75
ZNF540-202ENST00000343599 RAB3GAP2Q9H2M9 1393 aa10.36□□□□□ -0.75
ZNF540-202ENST00000343599 RIC1Q4ADV7 1423 aa10.36□□□□□ -0.75
ZNF540-202ENST00000343599 GRIN3BO60391 1043 aa10.36□□□□□ -0.75
ZNF540-202ENST00000343599 NUDT16Q96DE0 195 aaKnown RBP10.35□□□□□ -0.75
ZNF540-202ENST00000343599 CD2APQ9Y5K6 639 aa10.35□□□□□ -0.75
ZNF540-202ENST00000343599 ADAMTSL1Q8N6G6 1762 aa10.35□□□□□ -0.75
ZNF540-202ENST00000343599 PPP4R3CPQ6ZMV5 832 aa10.35□□□□□ -0.75
ZNF540-202ENST00000343599 AKT1S1Q96B36 256 aa10.35□□□□□ -0.75
ZNF540-202ENST00000343599 PTGER2P43116 358 aa10.34□□□□□ -0.75
ZNF540-202ENST00000343599 NKX1-1Q15270 411 aaPredicted RBP10.34□□□□□ -0.75
ZNF540-202ENST00000343599 DDX60Q8IY21 1712 aaKnown RBP10.34□□□□□ -0.75
ZNF540-202ENST00000343599 CENPJQ9HC77 1338 aaPredicted RBP10.34□□□□□ -0.75
ZNF540-202ENST00000343599 NPM2Q86SE8 214 aaKnown RBP10.34□□□□□ -0.75
ZNF540-202ENST00000343599 PRAM1Q96QH2 718 aa10.34□□□□□ -0.75
ZNF540-202ENST00000343599 SCN4AP35499 1836 aa10.34□□□□□ -0.75
ZNF540-202ENST00000343599 LAMB4A4D0S4 1761 aa10.33□□□□□ -0.76
ZNF540-202ENST00000343599 TIAM2Q8IVF5 1701 aa10.32□□□□□ -0.76
ZNF540-202ENST00000343599 ANO8Q9HCE9 1232 aaPredicted RBP10.32□□□□□ -0.76
ZNF540-202ENST00000343599 IFFO2Q5TF58 517 aa10.31□□□□□ -0.76
ZNF540-202ENST00000343599 BTG4Q9NY30 223 aa10.31□□□□□ -0.76
ZNF540-202ENST00000343599 CHGAP10645 457 aaKnown RBP10.3□□□□□ -0.76
ZNF540-202ENST00000343599 ACEP12821 1306 aa10.29□□□□□ -0.76
ZNF540-202ENST00000343599 KDRP35968 1356 aa10.29□□□□□ -0.76
ZNF540-202ENST00000343599 FOXO3O43524 673 aa10.29□□□□□ -0.76
ZNF540-202ENST00000343599 SBF1O95248 1867 aa10.29□□□□□ -0.76
ZNF540-202ENST00000343599 STK32BQ9NY57 414 aa10.29□□□□□ -0.76
ZNF540-202ENST00000343599 ERBB3P21860 1342 aa10.29□□□□□ -0.76
ZNF540-202ENST00000343599 SUPT16HQ9Y5B9 1047 aaKnown RBP10.29□□□□□ -0.76
ZNF540-202ENST00000343599 A0A1W2PP64 1363 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms