RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 PLEKHM2Q8IWE5 1019 aa18.23■□□□□ 0.51
CLCN1-201ENST00000343257 USP26Q9BXU7 913 aa18.23■□□□□ 0.51
CLCN1-201ENST00000343257 CYP2E1P05181 493 aaPredicted RBP18.22■□□□□ 0.51
CLCN1-201ENST00000343257 SPDYE4A6NLX3 237 aa18.22■□□□□ 0.51
CLCN1-201ENST00000343257 KIAA2012Q0VF49 1180 aa18.22■□□□□ 0.51
CLCN1-201ENST00000343257 ERCC6Q03468 1493 aa18.22■□□□□ 0.51
CLCN1-201ENST00000343257 TTC12Q9H892 705 aaPredicted RBP18.22■□□□□ 0.51
CLCN1-201ENST00000343257 NOS1P29475 1434 aa18.21■□□□□ 0.51
CLCN1-201ENST00000343257 HMOX1P09601 288 aa18.21■□□□□ 0.51
CLCN1-201ENST00000343257 CCDC94Q9BW85 323 aaPredicted RBP18.21■□□□□ 0.51
CLCN1-201ENST00000343257 STK26Q9P289 416 aa18.21■□□□□ 0.51
CLCN1-201ENST00000343257 ST18O60284 1047 aa18.2■□□□□ 0.5
CLCN1-201ENST00000343257 STAC3Q96MF2 364 aa18.2■□□□□ 0.5
CLCN1-201ENST00000343257 SRPK2P78362 688 aaKnown RBP18.18■□□□□ 0.5
CLCN1-201ENST00000343257 BCL11BQ9C0K0 894 aaPredicted RBP18.18■□□□□ 0.5
CLCN1-201ENST00000343257 TSPY26PQ9H489 355 aa18.18■□□□□ 0.5
CLCN1-201ENST00000343257 USP25Q9UHP3 1055 aa18.18■□□□□ 0.5
CLCN1-201ENST00000343257 SPHKAPQ2M3C7 1700 aa18.18■□□□□ 0.5
CLCN1-201ENST00000343257 NEK4P51957 841 aa18.18■□□□□ 0.5
CLCN1-201ENST00000343257 PPP4R3BQ5MIZ7 849 aa18.18■□□□□ 0.5
CLCN1-201ENST00000343257 MTERF4Q7Z6M4 381 aaKnown RBP18.18■□□□□ 0.5
CLCN1-201ENST00000343257 ABCC11Q96J66 1382 aa18.18■□□□□ 0.5
CLCN1-201ENST00000343257 PRKAR2BP31323 418 aa18.18■□□□□ 0.5
CLCN1-201ENST00000343257 TTC22Q5TAA0 569 aa18.18■□□□□ 0.5
CLCN1-201ENST00000343257 ZNF710Q8N1W2 664 aa18.18■□□□□ 0.5
CLCN1-201ENST00000343257 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLCN1-201ENST00000343257 SDSP20132 328 aa18.17■□□□□ 0.5
CLCN1-201ENST00000343257 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
CLCN1-201ENST00000343257 GADD45BO75293 160 aaPredicted RBP18.17■□□□□ 0.5
CLCN1-201ENST00000343257 DIAPH1O60610 1272 aaKnown RBP18.16■□□□□ 0.5
CLCN1-201ENST00000343257 DTNBO60941 627 aa18.16■□□□□ 0.5
CLCN1-201ENST00000343257 ZSCAN20P17040 1043 aaPredicted RBP18.16■□□□□ 0.5
CLCN1-201ENST00000343257 ATP2B3Q16720 1220 aa18.16■□□□□ 0.5
CLCN1-201ENST00000343257 INTS3Q68E01 1043 aaKnown RBP18.16■□□□□ 0.5
CLCN1-201ENST00000343257 VAMP4O75379 141 aa18.16■□□□□ 0.5
CLCN1-201ENST00000343257 ALDH1L2Q3SY69 923 aa18.16■□□□□ 0.5
CLCN1-201ENST00000343257 TSHZ3Q63HK5 1081 aa18.16■□□□□ 0.5
CLCN1-201ENST00000343257 CWC22Q9HCG8 908 aaKnown RBP18.16■□□□□ 0.5
CLCN1-201ENST00000343257 TRPM2O94759 1503 aa18.16■□□□□ 0.5
CLCN1-201ENST00000343257 MCM5P33992 734 aa18.15■□□□□ 0.5
CLCN1-201ENST00000343257 DMTNQ08495 405 aa18.15■□□□□ 0.5
CLCN1-201ENST00000343257 MYRIPQ8NFW9 859 aa18.15■□□□□ 0.5
CLCN1-201ENST00000343257 CFAP74Q9C0B2 1584 aa18.14■□□□□ 0.49
CLCN1-201ENST00000343257 PHACTR3Q96KR7 559 aa18.14■□□□□ 0.49
CLCN1-201ENST00000343257 NOLC1Q14978 699 aaKnown RBP eCLIP18.14■□□□□ 0.49
CLCN1-201ENST00000343257 ABCA6Q8N139 1617 aa18.13■□□□□ 0.49
CLCN1-201ENST00000343257 TMX3Q96JJ7 454 aa18.12■□□□□ 0.49
CLCN1-201ENST00000343257 EVC2Q86UK5 1308 aa18.12■□□□□ 0.49
CLCN1-201ENST00000343257 CASC1Q6TDU7 716 aa18.12■□□□□ 0.49
CLCN1-201ENST00000343257 DCTN1Q14203 1278 aa18.11■□□□□ 0.49
CLCN1-201ENST00000343257 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.11■□□□□ 0.49
CLCN1-201ENST00000343257 C8orf58Q8NAV2 365 aa18.11■□□□□ 0.49
CLCN1-201ENST00000343257 IL16Q14005 1332 aa18.1■□□□□ 0.49
CLCN1-201ENST00000343257 TWISTNBQ3B726 338 aaPredicted RBP18.1■□□□□ 0.49
CLCN1-201ENST00000343257 ADCY5O95622 1261 aa18.1■□□□□ 0.49
CLCN1-201ENST00000343257 MBD3O95983 291 aa18.1■□□□□ 0.49
CLCN1-201ENST00000343257 SHROOM2Q13796 1616 aa18.1■□□□□ 0.49
CLCN1-201ENST00000343257 FAM83GA6ND36 823 aa18.1■□□□□ 0.49
CLCN1-201ENST00000343257 HCLS1P14317 486 aaPredicted RBP18.1■□□□□ 0.49
CLCN1-201ENST00000343257 MBIPQ9NS73 344 aa18.1■□□□□ 0.49
CLCN1-201ENST00000343257 FYB1O15117 783 aa18.09■□□□□ 0.49
CLCN1-201ENST00000343257 KRT24Q2M2I5 525 aa18.09■□□□□ 0.49
CLCN1-201ENST00000343257 LARP6Q9BRS8 491 aaKnown RBP18.09■□□□□ 0.49
CLCN1-201ENST00000343257 UPF3BQ9BZI7 483 aaKnown RBP18.09■□□□□ 0.49
CLCN1-201ENST00000343257 MINK1Q8N4C8 1332 aaPredicted RBP18.09■□□□□ 0.49
CLCN1-201ENST00000343257 SPC24Q8NBT2 197 aa18.09■□□□□ 0.49
CLCN1-201ENST00000343257 BCL2L12Q9HB09 334 aa18.08■□□□□ 0.49
CLCN1-201ENST00000343257 KIF3AQ9Y496 699 aa18.08■□□□□ 0.49
CLCN1-201ENST00000343257 CHMP4BQ9H444 224 aaKnown RBP18.08■□□□□ 0.48
CLCN1-201ENST00000343257 DCTPP1Q9H773 170 aa18.08■□□□□ 0.48
CLCN1-201ENST00000343257 C14orf93Q9H972 538 aaKnown RBP18.08■□□□□ 0.48
CLCN1-201ENST00000343257 U2AF2P26368 475 aaKnown RBP eCLIP18.07■□□□□ 0.48
CLCN1-201ENST00000343257 USP48Q86UV5 1035 aa18.07■□□□□ 0.48
CLCN1-201ENST00000343257 MAP3K4Q9Y6R4 1608 aa18.07■□□□□ 0.48
CLCN1-201ENST00000343257 A0A1W2PP64 1363 aa18.06■□□□□ 0.48
CLCN1-201ENST00000343257 ANKRD36BQ8N2N9 1353 aa18.06■□□□□ 0.48
CLCN1-201ENST00000343257 PIBF1Q8WXW3 757 aa18.06■□□□□ 0.48
CLCN1-201ENST00000343257 PALD1Q9ULE6 856 aa18.06■□□□□ 0.48
CLCN1-201ENST00000343257 REC8O95072 547 aa18.06■□□□□ 0.48
CLCN1-201ENST00000343257 GGT6Q6P531 493 aa18.06■□□□□ 0.48
CLCN1-201ENST00000343257 ERC2O15083 957 aa18.05■□□□□ 0.48
CLCN1-201ENST00000343257 PDCL2Q8N4E4 241 aa18.05■□□□□ 0.48
CLCN1-201ENST00000343257 SYAP1Q96A49 352 aaPredicted RBP18.05■□□□□ 0.48
CLCN1-201ENST00000343257 SBNO2Q9Y2G9 1366 aa18.05■□□□□ 0.48
CLCN1-201ENST00000343257 BRD1O95696 1058 aa18.04■□□□□ 0.48
CLCN1-201ENST00000343257 ADGRB2O60241 1585 aa18.04■□□□□ 0.48
CLCN1-201ENST00000343257 ANO2Q9NQ90 1003 aa18.04■□□□□ 0.48
CLCN1-201ENST00000343257 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
CLCN1-201ENST00000343257 UTP14CQ5TAP6 766 aaKnown RBP18.03■□□□□ 0.48
CLCN1-201ENST00000343257 RILPL2Q969X0 211 aa18.03■□□□□ 0.48
CLCN1-201ENST00000343257 ABCC4O15439 1325 aa18.03■□□□□ 0.48
CLCN1-201ENST00000343257 HMGN5P82970 282 aaKnown RBP18.03■□□□□ 0.48
CLCN1-201ENST00000343257 PRIMPOLQ96LW4 560 aa18.03■□□□□ 0.48
CLCN1-201ENST00000343257 PLCH2O75038 1416 aa18.03■□□□□ 0.48
CLCN1-201ENST00000343257 CFAP65Q6ZU64 1925 aaKnown RBP18.03■□□□□ 0.48
CLCN1-201ENST00000343257 API5Q9BZZ5 524 aaKnown RBP18.02■□□□□ 0.48
CLCN1-201ENST00000343257 RIOK3O14730 519 aaKnown RBP18.02■□□□□ 0.48
CLCN1-201ENST00000343257 MEIS3Q99687 375 aa18.02■□□□□ 0.48
CLCN1-201ENST00000343257 PYCARDQ9ULZ3 195 aa18.02■□□□□ 0.48
CLCN1-201ENST00000343257 CNPY2Q9Y2B0 182 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms