RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 HPS1Q92902 700 aa6.47□□□□□ -1.37
LRRC39-201ENST00000342895 PRM3Q9NNZ6 103 aa6.47□□□□□ -1.37
LRRC39-201ENST00000342895 GPR37L1O60883 481 aa6.46□□□□□ -1.38
LRRC39-201ENST00000342895 INSM1Q01101 510 aaPredicted RBP6.46□□□□□ -1.38
LRRC39-201ENST00000342895 AAASQ9NRG9 546 aa6.46□□□□□ -1.38
LRRC39-201ENST00000342895 ZBBXA8MT70 800 aa6.45□□□□□ -1.38
LRRC39-201ENST00000342895 AXIN1O15169 862 aa6.45□□□□□ -1.38
LRRC39-201ENST00000342895 GRM5P41594 1212 aa6.45□□□□□ -1.38
LRRC39-201ENST00000342895 ADAM32Q8TC27 787 aa6.45□□□□□ -1.38
LRRC39-201ENST00000342895 CARD14Q9BXL6 1004 aa6.45□□□□□ -1.38
LRRC39-201ENST00000342895 NNTQ13423 1086 aa6.45□□□□□ -1.38
LRRC39-201ENST00000342895 MCM6Q14566 821 aa6.45□□□□□ -1.38
LRRC39-201ENST00000342895 SLC10A4Q96EP9 437 aa6.45□□□□□ -1.38
LRRC39-201ENST00000342895 MCCD1P59942 119 aaPredicted RBP6.44□□□□□ -1.38
LRRC39-201ENST00000342895 LCE1DQ5T752 114 aa6.44□□□□□ -1.38
LRRC39-201ENST00000342895 ZNF592Q92610 1267 aa6.44□□□□□ -1.38
LRRC39-201ENST00000342895 FLIIQ13045 1269 aa6.43□□□□□ -1.38
LRRC39-201ENST00000342895 NR1H3Q13133 447 aa6.43□□□□□ -1.38
LRRC39-201ENST00000342895 ARID5BQ14865 1188 aa6.43□□□□□ -1.38
LRRC39-201ENST00000342895 VASH1Q7L8A9 365 aaPredicted RBP6.43□□□□□ -1.38
LRRC39-201ENST00000342895 KLF16Q9BXK1 252 aaPredicted RBP6.43□□□□□ -1.38
LRRC39-201ENST00000342895 FBXO45P0C2W1 286 aa6.43□□□□□ -1.38
LRRC39-201ENST00000342895 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
LRRC39-201ENST00000342895 ST8SIA5O15466 376 aa6.42□□□□□ -1.38
LRRC39-201ENST00000342895 NBPF20Q3BBV1 942 aa6.42□□□□□ -1.38
LRRC39-201ENST00000342895 KCTD15Q96SI1 283 aaPredicted RBP6.42□□□□□ -1.38
LRRC39-201ENST00000342895 ZNF330Q9Y3S2 320 aaPredicted RBP6.42□□□□□ -1.38
LRRC39-201ENST00000342895 NR3C2P08235 984 aa6.41□□□□□ -1.38
LRRC39-201ENST00000342895 FSHRP23945 695 aa6.41□□□□□ -1.38
LRRC39-201ENST00000342895 DZIP3Q86Y13 1208 aaKnown RBP6.41□□□□□ -1.38
LRRC39-201ENST00000342895 CCDC125Q86Z20 511 aa6.41□□□□□ -1.38
LRRC39-201ENST00000342895 TBC1D2BQ9UPU7 963 aa6.41□□□□□ -1.38
LRRC39-201ENST00000342895 ESPNB1AK53 854 aa6.41□□□□□ -1.38
LRRC39-201ENST00000342895 CAPN5O15484 640 aaPredicted RBP6.41□□□□□ -1.38
LRRC39-201ENST00000342895 TIMP2P16035 220 aa6.41□□□□□ -1.38
LRRC39-201ENST00000342895 CCDC116Q8IYX3 515 aa6.41□□□□□ -1.38
LRRC39-201ENST00000342895 DHX9Q08211 1270 aaKnown RBP6.4□□□□□ -1.39
LRRC39-201ENST00000342895 SEPT12Q8IYM1 358 aa6.4□□□□□ -1.39
LRRC39-201ENST00000342895 EMILIN1Q9Y6C2 1016 aa6.4□□□□□ -1.39
LRRC39-201ENST00000342895 WDR4P57081 412 aaKnown RBP6.39□□□□□ -1.39
LRRC39-201ENST00000342895 IRF5Q13568 498 aa6.39□□□□□ -1.39
LRRC39-201ENST00000342895 ATP13A2Q9NQ11 1180 aa6.39□□□□□ -1.39
LRRC39-201ENST00000342895 INTS6LQ5JSJ4 861 aaKnown RBP6.39□□□□□ -1.39
LRRC39-201ENST00000342895 TRIM52Q96A61 297 aa6.39□□□□□ -1.39
LRRC39-201ENST00000342895 DACH1Q9UI36 760 aa6.39□□□□□ -1.39
LRRC39-201ENST00000342895 ZIC2O95409 532 aaPredicted RBP6.38□□□□□ -1.39
LRRC39-201ENST00000342895 WASHC4Q2M389 1173 aa6.38□□□□□ -1.39
LRRC39-201ENST00000342895 PGPEP1Q9NXJ5 209 aa6.38□□□□□ -1.39
LRRC39-201ENST00000342895 COG6Q9Y2V7 657 aa6.38□□□□□ -1.39
LRRC39-201ENST00000342895 ITPKCQ96DU7 683 aa6.37□□□□□ -1.39
LRRC39-201ENST00000342895 SENP2Q9HC62 589 aa6.37□□□□□ -1.39
LRRC39-201ENST00000342895 GDPD2Q9HCC8 539 aa6.37□□□□□ -1.39
LRRC39-201ENST00000342895 PCDHB9Q9Y5E1 797 aa6.37□□□□□ -1.39
LRRC39-201ENST00000342895 PPP1R26Q5T8A7 1209 aaPredicted RBP6.36□□□□□ -1.39
LRRC39-201ENST00000342895 KIFC2Q96AC6 838 aa6.36□□□□□ -1.39
LRRC39-201ENST00000342895 EIF4G2P78344 907 aaKnown RBP eCLIP6.36□□□□□ -1.39
LRRC39-201ENST00000342895 RNF20Q5VTR2 975 aa6.36□□□□□ -1.39
LRRC39-201ENST00000342895 TRIM46Q7Z4K8 759 aa6.36□□□□□ -1.39
LRRC39-201ENST00000342895 ZFAND3Q9H8U3 227 aa6.36□□□□□ -1.39
LRRC39-201ENST00000342895 ABL2P42684 1182 aa6.35□□□□□ -1.39
LRRC39-201ENST00000342895 GMPR2Q9P2T1 348 aaKnown RBP6.35□□□□□ -1.39
LRRC39-201ENST00000342895 RAD21O60216 631 aa6.34□□□□□ -1.39
LRRC39-201ENST00000342895 SOX11P35716 441 aa6.34□□□□□ -1.39
LRRC39-201ENST00000342895 MRPL14Q6P1L8 145 aaKnown RBP6.34□□□□□ -1.39
LRRC39-201ENST00000342895 Q6ZVU0 165 aa6.34□□□□□ -1.39
LRRC39-201ENST00000342895 MEIOBQ8N635 442 aa6.34□□□□□ -1.39
LRRC39-201ENST00000342895 TRIM47Q96LD4 638 aa6.34□□□□□ -1.39
LRRC39-201ENST00000342895 GIGYF1O75420 1035 aaPredicted RBP6.34□□□□□ -1.39
LRRC39-201ENST00000342895 UBTFP17480 764 aaKnown RBP6.34□□□□□ -1.39
LRRC39-201ENST00000342895 WWC1Q8IX03 1113 aa6.34□□□□□ -1.39
LRRC39-201ENST00000342895 POTECB2RU33 542 aa6.33□□□□□ -1.4
LRRC39-201ENST00000342895 ERVH48-1M5A8F1 160 aa6.33□□□□□ -1.4
LRRC39-201ENST00000342895 SCARF1Q14162 830 aa6.33□□□□□ -1.4
LRRC39-201ENST00000342895 TSEN34Q9BSV6 310 aaKnown RBP6.32□□□□□ -1.4
LRRC39-201ENST00000342895 CEP126Q9P2H0 1117 aa6.32□□□□□ -1.4
LRRC39-201ENST00000342895 BMP1P13497 986 aa6.32□□□□□ -1.4
LRRC39-201ENST00000342895 VAC14Q08AM6 782 aa6.32□□□□□ -1.4
LRRC39-201ENST00000342895 POM121Q96HA1 1249 aa6.32□□□□□ -1.4
LRRC39-201ENST00000342895 C11orf95C9JLR9 678 aaPredicted RBP6.31□□□□□ -1.4
LRRC39-201ENST00000342895 LILRA1O75019 489 aa6.31□□□□□ -1.4
LRRC39-201ENST00000342895 UPP2O95045 317 aa6.31□□□□□ -1.4
LRRC39-201ENST00000342895 LINC00528Q8N1L1 170 aa6.31□□□□□ -1.4
LRRC39-201ENST00000342895 ZNF784Q8NCA9 323 aaPredicted RBP6.31□□□□□ -1.4
LRRC39-201ENST00000342895 ZFP42Q96MM3 310 aa6.31□□□□□ -1.4
LRRC39-201ENST00000342895 TMPRSS4Q9NRS4 437 aa6.3□□□□□ -1.4
LRRC39-201ENST00000342895 CHIC2Q9UKJ5 165 aa6.3□□□□□ -1.4
LRRC39-201ENST00000342895 ERVK-9P63128 1117 aa6.3□□□□□ -1.4
LRRC39-201ENST00000342895 PHTF2Q8N3S3 785 aa6.3□□□□□ -1.4
LRRC39-201ENST00000342895 A6NJR5 290 aa6.29□□□□□ -1.4
LRRC39-201ENST00000342895 ADH1AP07327 375 aa6.29□□□□□ -1.4
LRRC39-201ENST00000342895 RAB15P59190 212 aa6.29□□□□□ -1.4
LRRC39-201ENST00000342895 CBLBQ13191 982 aa6.29□□□□□ -1.4
LRRC39-201ENST00000342895 SEMA3FQ13275 785 aa6.28□□□□□ -1.4
LRRC39-201ENST00000342895 CC2D2BQ6DHV5 1058 aa6.28□□□□□ -1.4
LRRC39-201ENST00000342895 PURBQ96QR8 312 aaKnown RBP6.28□□□□□ -1.4
LRRC39-201ENST00000342895 SPINT1O43278 529 aa6.28□□□□□ -1.4
LRRC39-201ENST00000342895 SNRPBP14678 240 aaKnown RBP6.28□□□□□ -1.4
LRRC39-201ENST00000342895 ALG2Q9H553 416 aa6.28□□□□□ -1.4
LRRC39-201ENST00000342895 BMP2P12643 396 aa6.27□□□□□ -1.41
LRRC39-201ENST00000342895 ADD1P35611 737 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms