RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 NFAT5O94916 1531 aa28.61■■■□□ 2.17
SDHC-201ENST00000342751 PCGF6Q9BYE7 350 aa28.61■■■□□ 2.17
SDHC-201ENST00000342751 RGPD5Q99666 1765 aa28.6■■■□□ 2.17
SDHC-201ENST00000342751 PSDA5PKW4 1024 aaPredicted RBP28.6■■■□□ 2.17
SDHC-201ENST00000342751 A0A1W2PP64 1363 aa28.6■■■□□ 2.17
SDHC-201ENST00000342751 DISP2A7MBM2 1401 aa28.6■■■□□ 2.17
SDHC-201ENST00000342751 PARP4Q9UKK3 1724 aaKnown RBP28.58■■■□□ 2.17
SDHC-201ENST00000342751 TESK2Q96S53 571 aa28.58■■■□□ 2.17
SDHC-201ENST00000342751 TERF2IPQ9NYB0 399 aa28.58■■■□□ 2.17
SDHC-201ENST00000342751 WDR17Q8IZU2 1322 aa28.58■■■□□ 2.17
SDHC-201ENST00000342751 APBA3O96018 575 aa28.56■■■□□ 2.16
SDHC-201ENST00000342751 EZH2Q15910 746 aaKnown RBP28.56■■■□□ 2.16
SDHC-201ENST00000342751 EDC4Q6P2E9 1401 aaKnown RBP28.56■■■□□ 2.16
SDHC-201ENST00000342751 LRRC37A3O60309 1634 aa28.55■■■□□ 2.16
SDHC-201ENST00000342751 USP31Q70CQ4 1352 aa28.54■■■□□ 2.16
SDHC-201ENST00000342751 USP47Q96K76 1375 aa28.54■■■□□ 2.16
SDHC-201ENST00000342751 LRP5O75197 1615 aa28.53■■■□□ 2.16
SDHC-201ENST00000342751 WNK3Q9BYP7 1800 aa28.53■■■□□ 2.16
SDHC-201ENST00000342751 DDB1Q16531 1140 aa28.52■■■□□ 2.16
SDHC-201ENST00000342751 USP54Q70EL1 1684 aa28.51■■■□□ 2.15
SDHC-201ENST00000342751 LTN1O94822 1766 aa28.5■■■□□ 2.15
SDHC-201ENST00000342751 PUS7Q96PZ0 661 aaKnown RBP28.49■■■□□ 2.15
SDHC-201ENST00000342751 CAMKK2Q96RR4 588 aa28.49■■■□□ 2.15
SDHC-201ENST00000342751 OVOS2A0A0G2JMS6 1433 aa28.48■■■□□ 2.15
SDHC-201ENST00000342751 OVOS2A0A0J9YW53 1432 aa28.48■■■□□ 2.15
SDHC-201ENST00000342751 OVOS2Q6IE36 1432 aa28.48■■■□□ 2.15
SDHC-201ENST00000342751 R3HDM1Q15032 1099 aaKnown RBP28.47■■■□□ 2.15
SDHC-201ENST00000342751 CARD10Q9BWT7 1032 aa28.47■■■□□ 2.15
SDHC-201ENST00000342751 NINLQ9Y2I6 1382 aa28.47■■■□□ 2.15
SDHC-201ENST00000342751 TMF1P82094 1093 aa28.46■■■□□ 2.15
SDHC-201ENST00000342751 ABCC6O95255 1503 aa28.46■■■□□ 2.15
SDHC-201ENST00000342751 NLRP2Q9NX02 1062 aa28.45■■■□□ 2.14
SDHC-201ENST00000342751 PARD3Q8TEW0 1356 aa28.45■■■□□ 2.14
SDHC-201ENST00000342751 RREB1Q92766 1687 aa28.45■■■□□ 2.14
SDHC-201ENST00000342751 PEAK1Q9H792 1746 aa28.43■■■□□ 2.14
SDHC-201ENST00000342751 CCDC7Q96M83 1385 aa28.42■■■□□ 2.14
SDHC-201ENST00000342751 SLC24A1O60721 1099 aa28.42■■■□□ 2.14
SDHC-201ENST00000342751 CDCA7Q9BWT1 371 aaPredicted RBP28.42■■■□□ 2.14
SDHC-201ENST00000342751 ANKRD24Q8TF21 1146 aa28.41■■■□□ 2.14
SDHC-201ENST00000342751 COG3Q96JB2 828 aa28.41■■■□□ 2.14
SDHC-201ENST00000342751 ERBB3P21860 1342 aa28.41■■■□□ 2.14
SDHC-201ENST00000342751 NUP188Q5SRE5 1749 aa28.4■■■□□ 2.14
SDHC-201ENST00000342751 ANKRD36BQ8N2N9 1353 aa28.4■■■□□ 2.14
SDHC-201ENST00000342751 MARCH10Q8NA82 808 aaPredicted RBP28.4■■■□□ 2.14
SDHC-201ENST00000342751 C11orf95C9JLR9 678 aaPredicted RBP28.39■■■□□ 2.14
SDHC-201ENST00000342751 LTV1Q96GA3 475 aaPredicted RBP28.39■■■□□ 2.14
SDHC-201ENST00000342751 SBF2Q86WG5 1849 aa28.38■■■□□ 2.13
SDHC-201ENST00000342751 EXOC5O00471 708 aa28.37■■■□□ 2.13
SDHC-201ENST00000342751 PTF1AQ7RTS3 328 aa28.37■■■□□ 2.13
SDHC-201ENST00000342751 FBLN1P23142 703 aa28.36■■■□□ 2.13
SDHC-201ENST00000342751 TNS2Q63HR2 1409 aa28.35■■■□□ 2.13
SDHC-201ENST00000342751 CLSPNQ9HAW4 1339 aa28.34■■■□□ 2.13
SDHC-201ENST00000342751 GGNBP2Q9H3C7 697 aa28.33■■■□□ 2.13
SDHC-201ENST00000342751 CDCA8Q53HL2 280 aa28.32■■■□□ 2.12
SDHC-201ENST00000342751 CCER1Q8TC90 406 aaPredicted RBP28.32■■■□□ 2.12
SDHC-201ENST00000342751 TIMELESSQ9UNS1 1208 aa28.32■■■□□ 2.12
SDHC-201ENST00000342751 IL2RBP14784 551 aa28.31■■■□□ 2.12
SDHC-201ENST00000342751 AMPHP49418 695 aa28.31■■■□□ 2.12
SDHC-201ENST00000342751 NBPF14Q5TI25 921 aa28.31■■■□□ 2.12
SDHC-201ENST00000342751 IP6K1Q92551 441 aa28.31■■■□□ 2.12
SDHC-201ENST00000342751 BCL11BQ9C0K0 894 aaPredicted RBP28.31■■■□□ 2.12
SDHC-201ENST00000342751 MAP3K19Q56UN5 1328 aa28.31■■■□□ 2.12
SDHC-201ENST00000342751 POLR3GLQ9BT43 218 aa28.3■■■□□ 2.12
SDHC-201ENST00000342751 RGPD3A6NKT7 1758 aaPredicted RBP28.29■■■□□ 2.12
SDHC-201ENST00000342751 RGPD4Q7Z3J3 1758 aa28.29■■■□□ 2.12
SDHC-201ENST00000342751 ACSBG1Q96GR2 724 aa28.28■■■□□ 2.12
SDHC-201ENST00000342751 HOXC9P31274 260 aa28.27■■■□□ 2.12
SDHC-201ENST00000342751 RRS1Q15050 365 aaKnown RBP28.27■■■□□ 2.12
SDHC-201ENST00000342751 FYB1O15117 783 aa28.26■■■□□ 2.11
SDHC-201ENST00000342751 KIF20BQ96Q89 1820 aa28.26■■■□□ 2.11
SDHC-201ENST00000342751 MYOM1P52179 1685 aa28.26■■■□□ 2.11
SDHC-201ENST00000342751 BCL9O00512 1426 aa28.25■■■□□ 2.11
SDHC-201ENST00000342751 FAM208AQ9UK61 1670 aaKnown RBP28.24■■■□□ 2.11
SDHC-201ENST00000342751 PLSCR1O15162 318 aa28.23■■■□□ 2.11
SDHC-201ENST00000342751 KCNQ2O43526 872 aa28.23■■■□□ 2.11
SDHC-201ENST00000342751 NSD3Q9BZ95 1437 aa28.22■■■□□ 2.11
SDHC-201ENST00000342751 RGPD2P0DJD1 1756 aa28.2■■■□□ 2.11
SDHC-201ENST00000342751 NHSQ6T4R5 1651 aa28.19■■■□□ 2.1
SDHC-201ENST00000342751 DDX54Q8TDD1 881 aaKnown RBP28.19■■■□□ 2.1
SDHC-201ENST00000342751 ANO8Q9HCE9 1232 aaPredicted RBP28.19■■■□□ 2.1
SDHC-201ENST00000342751 CARD14Q9BXL6 1004 aa28.18■■■□□ 2.1
SDHC-201ENST00000342751 RTL1A6NKG5 1358 aa28.18■■■□□ 2.1
SDHC-201ENST00000342751 USHBP1Q8N6Y0 703 aa28.16■■■□□ 2.1
SDHC-201ENST00000342751 TXNRD1Q16881 649 aa28.15■■■□□ 2.1
SDHC-201ENST00000342751 PROM2Q8N271 834 aa28.15■■■□□ 2.1
SDHC-201ENST00000342751 SMG6Q86US8 1419 aaKnown RBP28.15■■■□□ 2.1
SDHC-201ENST00000342751 KAT6BQ8WYB5 2073 aa28.15■■■□□ 2.1
SDHC-201ENST00000342751 HSPA5P11021 654 aaKnown RBP28.13■■■□□ 2.09
SDHC-201ENST00000342751 EIF4G2P78344 907 aaKnown RBP eCLIP28.12■■■□□ 2.09
SDHC-201ENST00000342751 MEGF6O75095 1541 aa28.12■■■□□ 2.09
SDHC-201ENST00000342751 HSP90AB2PQ58FF8 381 aa28.11■■■□□ 2.09
SDHC-201ENST00000342751 NBPF6Q5VWK0 638 aa28.11■■■□□ 2.09
SDHC-201ENST00000342751 NBPF4Q96M43 638 aa28.11■■■□□ 2.09
SDHC-201ENST00000342751 BTAF1O14981 1849 aa28.11■■■□□ 2.09
SDHC-201ENST00000342751 PPM1GO15355 546 aaPredicted RBP28.1■■■□□ 2.09
SDHC-201ENST00000342751 SPON1Q9HCB6 807 aa28.1■■■□□ 2.09
SDHC-201ENST00000342751 SYTL4Q96C24 671 aaPredicted RBP28.09■■■□□ 2.09
SDHC-201ENST00000342751 STK32BQ9NY57 414 aa28.09■■■□□ 2.09
SDHC-201ENST00000342751 EMILIN1Q9Y6C2 1016 aa28.09■■■□□ 2.09
SDHC-201ENST00000342751 FLT4P35916 1363 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms