RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 SOX12O15370 315 aa14.36□□□□□ -0.11
SNRPD2-201ENST00000342669 NBPF14Q5TI25 921 aa14.36□□□□□ -0.11
SNRPD2-201ENST00000342669 ARHGEF25Q86VW2 580 aa14.36□□□□□ -0.11
SNRPD2-201ENST00000342669 WDR17Q8IZU2 1322 aa14.36□□□□□ -0.11
SNRPD2-201ENST00000342669 WNK3Q9BYP7 1800 aa14.36□□□□□ -0.11
SNRPD2-201ENST00000342669 KTN1Q86UP2 1357 aaKnown RBP14.35□□□□□ -0.11
SNRPD2-201ENST00000342669 CPSF1Q10570 1443 aaKnown RBP14.35□□□□□ -0.11
SNRPD2-201ENST00000342669 DDB1Q16531 1140 aa14.35□□□□□ -0.11
SNRPD2-201ENST00000342669 AXIN2Q9Y2T1 843 aa14.35□□□□□ -0.11
SNRPD2-201ENST00000342669 MON2Q7Z3U7 1717 aa14.35□□□□□ -0.11
SNRPD2-201ENST00000342669 LRRC37A3O60309 1634 aa14.34□□□□□ -0.11
SNRPD2-201ENST00000342669 OVOS2A0A0G2JMS6 1433 aa14.34□□□□□ -0.11
SNRPD2-201ENST00000342669 OVOS2A0A0J9YW53 1432 aa14.34□□□□□ -0.11
SNRPD2-201ENST00000342669 OVOS2Q6IE36 1432 aa14.34□□□□□ -0.11
SNRPD2-201ENST00000342669 CSB-PGBD3P0DP91 1061 aa14.34□□□□□ -0.11
SNRPD2-201ENST00000342669 CDCA7Q9BWT1 371 aaPredicted RBP14.34□□□□□ -0.11
SNRPD2-201ENST00000342669 CARD11Q9BXL7 1154 aa14.34□□□□□ -0.11
SNRPD2-201ENST00000342669 PEAK1Q9H792 1746 aa14.34□□□□□ -0.11
SNRPD2-201ENST00000342669 SBNO2Q9Y2G9 1366 aa14.34□□□□□ -0.11
SNRPD2-201ENST00000342669 CARD10Q9BWT7 1032 aa14.32□□□□□ -0.12
SNRPD2-201ENST00000342669 NFAT5O94916 1531 aa14.31□□□□□ -0.12
SNRPD2-201ENST00000342669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.31□□□□□ -0.12
SNRPD2-201ENST00000342669 TMC1Q8TDI8 760 aa14.31□□□□□ -0.12
SNRPD2-201ENST00000342669 RGPD3A6NKT7 1758 aaPredicted RBP14.31□□□□□ -0.12
SNRPD2-201ENST00000342669 RGPD4Q7Z3J3 1758 aa14.31□□□□□ -0.12
SNRPD2-201ENST00000342669 TONSLQ96HA7 1378 aa14.31□□□□□ -0.12
SNRPD2-201ENST00000342669 HDGFL2Q7Z4V5 671 aaPredicted RBP14.3□□□□□ -0.12
SNRPD2-201ENST00000342669 BCL11BQ9C0K0 894 aaPredicted RBP14.3□□□□□ -0.12
SNRPD2-201ENST00000342669 ABCC6O95255 1503 aa14.3□□□□□ -0.12
SNRPD2-201ENST00000342669 LTN1O94822 1766 aa14.29□□□□□ -0.12
SNRPD2-201ENST00000342669 PLSCR1O15162 318 aa14.29□□□□□ -0.12
SNRPD2-201ENST00000342669 USP31Q70CQ4 1352 aa14.29□□□□□ -0.12
SNRPD2-201ENST00000342669 USP54Q70EL1 1684 aa14.29□□□□□ -0.12
SNRPD2-201ENST00000342669 EXOC5O00471 708 aa14.28□□□□□ -0.12
SNRPD2-201ENST00000342669 NME9Q86XW9 330 aa14.28□□□□□ -0.12
SNRPD2-201ENST00000342669 MARCH10Q8NA82 808 aaPredicted RBP14.28□□□□□ -0.12
SNRPD2-201ENST00000342669 CCDC7Q96M83 1385 aa14.28□□□□□ -0.12
SNRPD2-201ENST00000342669 KAT6BQ8WYB5 2073 aa14.27□□□□□ -0.12
SNRPD2-201ENST00000342669 CD163L1Q9NR16 1453 aa14.27□□□□□ -0.12
SNRPD2-201ENST00000342669 BCL9O00512 1426 aa14.27□□□□□ -0.12
SNRPD2-201ENST00000342669 SLC12A5Q9H2X9 1139 aa14.27□□□□□ -0.13
SNRPD2-201ENST00000342669 TERF2IPQ9NYB0 399 aa14.27□□□□□ -0.13
SNRPD2-201ENST00000342669 EDC4Q6P2E9 1401 aaKnown RBP14.25□□□□□ -0.13
SNRPD2-201ENST00000342669 PUS7Q96PZ0 661 aaKnown RBP14.25□□□□□ -0.13
SNRPD2-201ENST00000342669 SPON1Q9HCB6 807 aa14.25□□□□□ -0.13
SNRPD2-201ENST00000342669 KCNQ2O43526 872 aa14.24□□□□□ -0.13
SNRPD2-201ENST00000342669 PTF1AQ7RTS3 328 aa14.24□□□□□ -0.13
SNRPD2-201ENST00000342669 NLRP2Q9NX02 1062 aa14.24□□□□□ -0.13
SNRPD2-201ENST00000342669 PPP1R1BQ9UD71 204 aaPredicted RBP14.24□□□□□ -0.13
SNRPD2-201ENST00000342669 TNS2Q63HR2 1409 aa14.24□□□□□ -0.13
SNRPD2-201ENST00000342669 A0A1W2PP64 1363 aa14.23□□□□□ -0.13
SNRPD2-201ENST00000342669 ERBB3P21860 1342 aa14.23□□□□□ -0.13
SNRPD2-201ENST00000342669 SLC24A1O60721 1099 aa14.22□□□□□ -0.13
SNRPD2-201ENST00000342669 ANKRD24Q8TF21 1146 aa14.22□□□□□ -0.13
SNRPD2-201ENST00000342669 IL2RBP14784 551 aa14.21□□□□□ -0.13
SNRPD2-201ENST00000342669 PROM2Q8N271 834 aa14.21□□□□□ -0.13
SNRPD2-201ENST00000342669 ANO8Q9HCE9 1232 aaPredicted RBP14.21□□□□□ -0.13
SNRPD2-201ENST00000342669 NINLQ9Y2I6 1382 aa14.21□□□□□ -0.14
SNRPD2-201ENST00000342669 NHSQ6T4R5 1651 aa14.2□□□□□ -0.14
SNRPD2-201ENST00000342669 ST20-MTHFSA0A0A6YYL1 179 aa14.2□□□□□ -0.14
SNRPD2-201ENST00000342669 TXNRD1Q16881 649 aa14.2□□□□□ -0.14
SNRPD2-201ENST00000342669 CASZ1Q86V15 1759 aa14.19□□□□□ -0.14
SNRPD2-201ENST00000342669 TESK2Q96S53 571 aa14.19□□□□□ -0.14
SNRPD2-201ENST00000342669 STK32BQ9NY57 414 aa14.19□□□□□ -0.14
SNRPD2-201ENST00000342669 FAM208AQ9UK61 1670 aaKnown RBP14.18□□□□□ -0.14
SNRPD2-201ENST00000342669 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
SNRPD2-201ENST00000342669 IP6K1Q92551 441 aa14.18□□□□□ -0.14
SNRPD2-201ENST00000342669 ACSBG1Q96GR2 724 aa14.18□□□□□ -0.14
SNRPD2-201ENST00000342669 COG3Q96JB2 828 aa14.18□□□□□ -0.14
SNRPD2-201ENST00000342669 LTV1Q96GA3 475 aaPredicted RBP14.17□□□□□ -0.14
SNRPD2-201ENST00000342669 BTAF1O14981 1849 aa14.17□□□□□ -0.14
SNRPD2-201ENST00000342669 ZBTB7AO95365 584 aa14.15□□□□□ -0.14
SNRPD2-201ENST00000342669 AMPHP49418 695 aa14.15□□□□□ -0.14
SNRPD2-201ENST00000342669 TRIM26Q12899 539 aaPredicted RBP14.15□□□□□ -0.14
SNRPD2-201ENST00000342669 SLC15A2Q16348 729 aa14.15□□□□□ -0.14
SNRPD2-201ENST00000342669 PDGFDQ9GZP0 370 aaPredicted RBP14.15□□□□□ -0.14
SNRPD2-201ENST00000342669 TMF1P82094 1093 aa14.14□□□□□ -0.15
SNRPD2-201ENST00000342669 RGPD2P0DJD1 1756 aa14.14□□□□□ -0.15
SNRPD2-201ENST00000342669 ANKRD36BQ8N2N9 1353 aa14.13□□□□□ -0.15
SNRPD2-201ENST00000342669 HOXC9P31274 260 aa14.13□□□□□ -0.15
SNRPD2-201ENST00000342669 DDX54Q8TDD1 881 aaKnown RBP14.13□□□□□ -0.15
SNRPD2-201ENST00000342669 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
SNRPD2-201ENST00000342669 MAP3K19Q56UN5 1328 aa14.13□□□□□ -0.15
SNRPD2-201ENST00000342669 USP47Q96K76 1375 aa14.11□□□□□ -0.15
SNRPD2-201ENST00000342669 MYOM1P52179 1685 aa14.11□□□□□ -0.15
SNRPD2-201ENST00000342669 FBLN1P23142 703 aa14.11□□□□□ -0.15
SNRPD2-201ENST00000342669 YY1P25490 414 aa14.11□□□□□ -0.15
SNRPD2-201ENST00000342669 PTGER2P43116 358 aa14.1□□□□□ -0.15
SNRPD2-201ENST00000342669 CDCA8Q53HL2 280 aa14.1□□□□□ -0.15
SNRPD2-201ENST00000342669 MTFR1LQ9H019 292 aa14.1□□□□□ -0.15
SNRPD2-201ENST00000342669 PAPPAQ13219 1627 aa14.09□□□□□ -0.15
SNRPD2-201ENST00000342669 KIF20BQ96Q89 1820 aa14.09□□□□□ -0.15
SNRPD2-201ENST00000342669 FYB1O15117 783 aa14.09□□□□□ -0.15
SNRPD2-201ENST00000342669 ZCRB1Q8TBF4 217 aaKnown RBP14.09□□□□□ -0.15
SNRPD2-201ENST00000342669 GGNBP2Q9H3C7 697 aa14.09□□□□□ -0.15
SNRPD2-201ENST00000342669 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
SNRPD2-201ENST00000342669 RRS1Q15050 365 aaKnown RBP14.08□□□□□ -0.16
SNRPD2-201ENST00000342669 SYTL4Q96C24 671 aaPredicted RBP14.08□□□□□ -0.16
SNRPD2-201ENST00000342669 DOT1LQ8TEK3 1739 aa14.07□□□□□ -0.16
SNRPD2-201ENST00000342669 SHANK3Q9BYB0 1731 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms