RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 DACH1Q9UI36 760 aa18.08■□□□□ 0.49
COL11A2-201ENST00000341947 PDZRN3Q9UPQ7 1066 aa18.08■□□□□ 0.49
COL11A2-201ENST00000341947 CAVIN1Q6NZI2 390 aaKnown RBP18.08■□□□□ 0.48
COL11A2-201ENST00000341947 AEBP1Q8IUX7 1158 aa18.08■□□□□ 0.48
COL11A2-201ENST00000341947 AQRO60306 1485 aaKnown RBP eCLIP18.08■□□□□ 0.48
COL11A2-201ENST00000341947 ZHX3Q9H4I2 956 aa18.07■□□□□ 0.48
COL11A2-201ENST00000341947 MYL6BP14649 208 aa18.07■□□□□ 0.48
COL11A2-201ENST00000341947 SKIDA1Q1XH10 827 aa18.06■□□□□ 0.48
COL11A2-201ENST00000341947 NOL7Q9UMY1 257 aaKnown RBP18.06■□□□□ 0.48
COL11A2-201ENST00000341947 FIBPO43427 364 aa18.06■□□□□ 0.48
COL11A2-201ENST00000341947 NUP133Q8WUM0 1156 aa18.06■□□□□ 0.48
COL11A2-201ENST00000341947 LUC7LQ9NQ29 371 aaKnown RBP18.06■□□□□ 0.48
COL11A2-201ENST00000341947 ERLIN2O94905 339 aa18.06■□□□□ 0.48
COL11A2-201ENST00000341947 LRRC9Q6ZRR7 1453 aa18.06■□□□□ 0.48
COL11A2-201ENST00000341947 PRPF40AO75400 957 aaKnown RBP18.06■□□□□ 0.48
COL11A2-201ENST00000341947 STK3Q13188 491 aa18.06■□□□□ 0.48
COL11A2-201ENST00000341947 CCDC191Q8NCU4 936 aa18.06■□□□□ 0.48
COL11A2-201ENST00000341947 VSIG10Q8N0Z9 540 aa18.05■□□□□ 0.48
COL11A2-201ENST00000341947 MAP7D2Q96T17 732 aa18.05■□□□□ 0.48
COL11A2-201ENST00000341947 SERPINC1P01008 464 aa18.05■□□□□ 0.48
COL11A2-201ENST00000341947 TANGO6Q9C0B7 1094 aa18.05■□□□□ 0.48
COL11A2-201ENST00000341947 NFKBIBQ15653 356 aa18.04■□□□□ 0.48
COL11A2-201ENST00000341947 TXLNBQ8N3L3 684 aa18.04■□□□□ 0.48
COL11A2-201ENST00000341947 CABP1Q9NZU7 370 aa18.04■□□□□ 0.48
COL11A2-201ENST00000341947 CASKIN1Q8WXD9 1431 aa18.04■□□□□ 0.48
COL11A2-201ENST00000341947 MPHOSPH10O00566 681 aaKnown RBP18.04■□□□□ 0.48
COL11A2-201ENST00000341947 TSR2Q969E8 191 aaKnown RBP18.04■□□□□ 0.48
COL11A2-201ENST00000341947 RTEL1-TNFRSF6BF6WH68 1400 aa18.04■□□□□ 0.48
COL11A2-201ENST00000341947 DHX8Q14562 1220 aaKnown RBP18.03■□□□□ 0.48
COL11A2-201ENST00000341947 ZSCAN29Q8IWY8 852 aaPredicted RBP18.03■□□□□ 0.48
COL11A2-201ENST00000341947 DEF6Q9H4E7 631 aa18.03■□□□□ 0.48
COL11A2-201ENST00000341947 TRAK2O60296 914 aa18.03■□□□□ 0.48
COL11A2-201ENST00000341947 PPFIBP1Q86W92 1011 aa18.03■□□□□ 0.48
COL11A2-201ENST00000341947 HFM1A2PYH4 1435 aa18.03■□□□□ 0.48
COL11A2-201ENST00000341947 CDKL5O76039 1030 aa18.03■□□□□ 0.48
COL11A2-201ENST00000341947 ZRSR2Q15696 482 aaKnown RBP18.03■□□□□ 0.48
COL11A2-201ENST00000341947 FKBP4Q02790 459 aaKnown RBP eCLIP18.03■□□□□ 0.48
COL11A2-201ENST00000341947 PDE3AQ14432 1141 aa18.03■□□□□ 0.48
COL11A2-201ENST00000341947 H0YHG0 523 aa18.02■□□□□ 0.48
COL11A2-201ENST00000341947 MAP4K4O95819 1239 aaPredicted RBP18.02■□□□□ 0.48
COL11A2-201ENST00000341947 NEFHP12036 1026 aa18.02■□□□□ 0.48
COL11A2-201ENST00000341947 PRDM11Q9NQV5 511 aa18.02■□□□□ 0.48
COL11A2-201ENST00000341947 AACSQ86V21 672 aa18.02■□□□□ 0.48
COL11A2-201ENST00000341947 ANKLE2Q86XL3 938 aa18.02■□□□□ 0.48
COL11A2-201ENST00000341947 CWC15Q9P013 229 aaKnown RBP18.02■□□□□ 0.47
COL11A2-201ENST00000341947 ME1P48163 572 aa18.01■□□□□ 0.47
COL11A2-201ENST00000341947 TDO2P48775 406 aa18.01■□□□□ 0.47
COL11A2-201ENST00000341947 CDCA7LQ96GN5 454 aa18.01■□□□□ 0.47
COL11A2-201ENST00000341947 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
COL11A2-201ENST00000341947 BTBD11A6QL63 1104 aa18.01■□□□□ 0.47
COL11A2-201ENST00000341947 ANKRD18AQ8IVF6 992 aa18.01■□□□□ 0.47
COL11A2-201ENST00000341947 UBAC1Q9BSL1 405 aa18.01■□□□□ 0.47
COL11A2-201ENST00000341947 RAI14Q9P0K7 980 aa18.01■□□□□ 0.47
COL11A2-201ENST00000341947 HMGB2P26583 209 aaKnown RBP18.01■□□□□ 0.47
COL11A2-201ENST00000341947 CALRP27797 417 aaKnown RBP18■□□□□ 0.47
COL11A2-201ENST00000341947 CT47B1P0C2W7 299 aaPredicted RBP18■□□□□ 0.47
COL11A2-201ENST00000341947 CTNNA3Q9UI47 895 aa18■□□□□ 0.47
COL11A2-201ENST00000341947 GRIN2BQ13224 1484 aa18■□□□□ 0.47
COL11A2-201ENST00000341947 PRG4Q92954 1404 aaPredicted RBP18■□□□□ 0.47
COL11A2-201ENST00000341947 BMP2KQ9NSY1 1161 aaPredicted RBP18■□□□□ 0.47
COL11A2-201ENST00000341947 ZNF428Q96B54 188 aa18■□□□□ 0.47
COL11A2-201ENST00000341947 CCDC192P0DO97 292 aa17.99■□□□□ 0.47
COL11A2-201ENST00000341947 TNMDQ9H2S6 317 aa17.99■□□□□ 0.47
COL11A2-201ENST00000341947 IGHMBP2P38935 993 aaKnown RBP17.99■□□□□ 0.47
COL11A2-201ENST00000341947 CCDC181Q5TID7 509 aa17.99■□□□□ 0.47
COL11A2-201ENST00000341947 WDR33Q9C0J8 1336 aaKnown RBP17.99■□□□□ 0.47
COL11A2-201ENST00000341947 ZNF76P36508 570 aa17.99■□□□□ 0.47
COL11A2-201ENST00000341947 SLC12A5Q9H2X9 1139 aa17.99■□□□□ 0.47
COL11A2-201ENST00000341947 CEP126Q9P2H0 1117 aa17.99■□□□□ 0.47
COL11A2-201ENST00000341947 SEPT7Q16181 437 aaKnown RBP17.98■□□□□ 0.47
COL11A2-201ENST00000341947 AXDND1Q5T1B0 1012 aaPredicted RBP17.98■□□□□ 0.47
COL11A2-201ENST00000341947 SLC52A1Q9NWF4 448 aa17.98■□□□□ 0.47
COL11A2-201ENST00000341947 GOLGA6L10A6NI86 522 aa17.98■□□□□ 0.47
COL11A2-201ENST00000341947 PIP4K2BP78356 416 aa17.98■□□□□ 0.47
COL11A2-201ENST00000341947 MATR3P43243 847 aaKnown RBP eCLIP17.98■□□□□ 0.47
COL11A2-201ENST00000341947 WDR63Q8IWG1 891 aa17.98■□□□□ 0.47
COL11A2-201ENST00000341947 CBFA2T2O43439 604 aa17.98■□□□□ 0.47
COL11A2-201ENST00000341947 KRT85P78386 507 aa17.98■□□□□ 0.47
COL11A2-201ENST00000341947 DESP17661 470 aa17.97■□□□□ 0.47
COL11A2-201ENST00000341947 BICDL1Q6ZP65 573 aa17.97■□□□□ 0.47
COL11A2-201ENST00000341947 TMOD2Q9NZR1 351 aa17.97■□□□□ 0.47
COL11A2-201ENST00000341947 SSBP05455 408 aaKnown RBP eCLIP17.97■□□□□ 0.47
COL11A2-201ENST00000341947 POGZQ7Z3K3 1410 aa17.97■□□□□ 0.47
COL11A2-201ENST00000341947 SPC24Q8NBT2 197 aa17.97■□□□□ 0.47
COL11A2-201ENST00000341947 LRP2BPQ9P2M1 347 aa17.97■□□□□ 0.47
COL11A2-201ENST00000341947 BLOC1S2Q6QNY1 142 aa17.97■□□□□ 0.47
COL11A2-201ENST00000341947 SRGAP3O43295 1099 aa17.96■□□□□ 0.47
COL11A2-201ENST00000341947 LARP1BQ659C4 914 aaKnown RBP17.96■□□□□ 0.47
COL11A2-201ENST00000341947 WASF1Q92558 559 aa17.96■□□□□ 0.47
COL11A2-201ENST00000341947 MTERF4Q7Z6M4 381 aaKnown RBP17.96■□□□□ 0.47
COL11A2-201ENST00000341947 PDRG1Q9NUG6 133 aa17.96■□□□□ 0.47
COL11A2-201ENST00000341947 SEPT11Q9NVA2 429 aaKnown RBP17.96■□□□□ 0.47
COL11A2-201ENST00000341947 KIF21BO75037 1637 aa17.96■□□□□ 0.46
COL11A2-201ENST00000341947 C9orf84Q5VXU9 1444 aa17.95■□□□□ 0.46
COL11A2-201ENST00000341947 ANKRD62A6NC57 917 aa17.95■□□□□ 0.46
COL11A2-201ENST00000341947 NBPF1Q3BBV0 1214 aa17.95■□□□□ 0.46
COL11A2-201ENST00000341947 ZSCAN31Q96LW9 406 aaPredicted RBP17.95■□□□□ 0.46
COL11A2-201ENST00000341947 STARD3NLO95772 234 aa17.94■□□□□ 0.46
COL11A2-201ENST00000341947 KRT32Q14532 448 aa17.94■□□□□ 0.46
COL11A2-201ENST00000341947 BCAR3O75815 825 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms