RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 USHBP1Q8N6Y0 703 aa23.77■■□□□ 1.4
SEMA6C-201ENST00000341697 C22orf23Q9BZE7 217 aa23.77■■□□□ 1.4
SEMA6C-201ENST00000341697 NFXL1Q6ZNB6 911 aa23.77■■□□□ 1.4
SEMA6C-201ENST00000341697 THUMPD2Q9BTF0 503 aaKnown RBP23.77■■□□□ 1.4
SEMA6C-201ENST00000341697 CEP170Q5SW79 1584 aa23.77■■□□□ 1.4
SEMA6C-201ENST00000341697 RALYLQ86SE5 291 aaKnown RBP23.76■■□□□ 1.39
SEMA6C-201ENST00000341697 IFT57Q9NWB7 429 aa23.76■■□□□ 1.39
SEMA6C-201ENST00000341697 TTC21BQ7Z4L5 1316 aa23.76■■□□□ 1.39
SEMA6C-201ENST00000341697 GOLGA6L3A6NEY3 463 aa23.75■■□□□ 1.39
SEMA6C-201ENST00000341697 DEKP35659 375 aaKnown RBP23.75■■□□□ 1.39
SEMA6C-201ENST00000341697 TAF7Q15545 349 aaPredicted RBP23.74■■□□□ 1.39
SEMA6C-201ENST00000341697 STARD3NLO95772 234 aa23.74■■□□□ 1.39
SEMA6C-201ENST00000341697 NAP1L5Q96NT1 182 aaPredicted RBP23.74■■□□□ 1.39
SEMA6C-201ENST00000341697 MIS18AQ9NYP9 233 aa23.74■■□□□ 1.39
SEMA6C-201ENST00000341697 ADAMTS2O95450 1211 aa23.74■■□□□ 1.39
SEMA6C-201ENST00000341697 DUSP27Q5VZP5 1158 aa23.74■■□□□ 1.39
SEMA6C-201ENST00000341697 DNAJC2Q99543 621 aaKnown RBP23.74■■□□□ 1.39
SEMA6C-201ENST00000341697 DCTN1Q14203 1278 aa23.73■■□□□ 1.39
SEMA6C-201ENST00000341697 RALGAPBQ86X10 1494 aa23.73■■□□□ 1.39
SEMA6C-201ENST00000341697 DHX16O60231 1041 aaKnown RBP23.73■■□□□ 1.39
SEMA6C-201ENST00000341697 TMOD3Q9NYL9 352 aa23.73■■□□□ 1.39
SEMA6C-201ENST00000341697 KIAA2012Q0VF49 1180 aa23.73■■□□□ 1.39
SEMA6C-201ENST00000341697 CTDP1Q9Y5B0 961 aaPredicted RBP23.73■■□□□ 1.39
SEMA6C-201ENST00000341697 HIP1O00291 1037 aa23.72■■□□□ 1.39
SEMA6C-201ENST00000341697 FOXD4L6Q3SYB3 417 aaPredicted RBP23.72■■□□□ 1.39
SEMA6C-201ENST00000341697 FOXD4L3Q6VB84 417 aaPredicted RBP23.72■■□□□ 1.39
SEMA6C-201ENST00000341697 MSH6P52701 1360 aa23.72■■□□□ 1.39
SEMA6C-201ENST00000341697 CCDC158Q5M9N0 1113 aa23.72■■□□□ 1.39
SEMA6C-201ENST00000341697 PRAG1Q86YV5 1406 aa23.72■■□□□ 1.39
SEMA6C-201ENST00000341697 ANKRD36BQ8N2N9 1353 aa23.71■■□□□ 1.39
SEMA6C-201ENST00000341697 LRRCC1Q9C099 1032 aa23.71■■□□□ 1.39
SEMA6C-201ENST00000341697 HMGB2P26583 209 aaKnown RBP23.71■■□□□ 1.39
SEMA6C-201ENST00000341697 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.71■■□□□ 1.39
SEMA6C-201ENST00000341697 ZMYM3Q14202 1370 aa23.71■■□□□ 1.39
SEMA6C-201ENST00000341697 CCDC57Q2TAC2 916 aa23.7■■□□□ 1.39
SEMA6C-201ENST00000341697 FYB1O15117 783 aa23.7■■□□□ 1.38
SEMA6C-201ENST00000341697 GNL3LQ9NVN8 582 aaKnown RBP23.7■■□□□ 1.38
SEMA6C-201ENST00000341697 DDX49Q9Y6V7 483 aaKnown RBP23.7■■□□□ 1.38
SEMA6C-201ENST00000341697 SIL1Q9H173 461 aa23.69■■□□□ 1.38
SEMA6C-201ENST00000341697 SMC3Q9UQE7 1217 aa23.69■■□□□ 1.38
SEMA6C-201ENST00000341697 PTCD1O75127 700 aaKnown RBP23.68■■□□□ 1.38
SEMA6C-201ENST00000341697 PSMA5P28066 241 aa23.68■■□□□ 1.38
SEMA6C-201ENST00000341697 TTC39AQ5SRH9 613 aa23.68■■□□□ 1.38
SEMA6C-201ENST00000341697 MAPKBP1O60336 1514 aa23.68■■□□□ 1.38
SEMA6C-201ENST00000341697 TTC21AQ8NDW8 1320 aa23.68■■□□□ 1.38
SEMA6C-201ENST00000341697 SRGAP3O43295 1099 aa23.67■■□□□ 1.38
SEMA6C-201ENST00000341697 SKOR2Q2VWA4 1001 aaPredicted RBP23.67■■□□□ 1.38
SEMA6C-201ENST00000341697 MPHOSPH8Q99549 860 aa23.67■■□□□ 1.38
SEMA6C-201ENST00000341697 MPRIPQ6WCQ1 1025 aa23.66■■□□□ 1.38
SEMA6C-201ENST00000341697 NGLY1Q96IV0 654 aa23.66■■□□□ 1.38
SEMA6C-201ENST00000341697 RPAP2Q8IXW5 612 aaPredicted RBP23.66■■□□□ 1.38
SEMA6C-201ENST00000341697 CHMP5Q9NZZ3 219 aa23.66■■□□□ 1.38
SEMA6C-201ENST00000341697 ALDH1L2Q3SY69 923 aa23.65■■□□□ 1.38
SEMA6C-201ENST00000341697 CREBRFQ8IUR6 639 aa23.65■■□□□ 1.38
SEMA6C-201ENST00000341697 RTN4Q9NQC3 1192 aaKnown RBP23.65■■□□□ 1.38
SEMA6C-201ENST00000341697 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.37
SEMA6C-201ENST00000341697 DNMT1P26358 1616 aaKnown RBP23.63■■□□□ 1.37
SEMA6C-201ENST00000341697 TMEM57Q8N5G2 664 aa23.63■■□□□ 1.37
SEMA6C-201ENST00000341697 ATP10AO60312 1499 aa23.63■■□□□ 1.37
SEMA6C-201ENST00000341697 PPIP5K1Q6PFW1 1433 aa23.63■■□□□ 1.37
SEMA6C-201ENST00000341697 NPHP3Q7Z494 1330 aa23.63■■□□□ 1.37
SEMA6C-201ENST00000341697 VPS37CA5D8V6 355 aaPredicted RBP23.63■■□□□ 1.37
SEMA6C-201ENST00000341697 EXOC5O00471 708 aa23.62■■□□□ 1.37
SEMA6C-201ENST00000341697 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.62■■□□□ 1.37
SEMA6C-201ENST00000341697 SAMD9Q5K651 1589 aa23.62■■□□□ 1.37
SEMA6C-201ENST00000341697 NUCB2P80303 420 aa23.62■■□□□ 1.37
SEMA6C-201ENST00000341697 LARP1Q6PKG0 1096 aaKnown RBP23.61■■□□□ 1.37
SEMA6C-201ENST00000341697 ANKRD24Q8TF21 1146 aa23.61■■□□□ 1.37
SEMA6C-201ENST00000341697 SSH1Q8WYL5 1049 aa23.61■■□□□ 1.37
SEMA6C-201ENST00000341697 SAFBQ15424 915 aaKnown RBP eCLIP23.61■■□□□ 1.37
SEMA6C-201ENST00000341697 CEP126Q9P2H0 1117 aa23.61■■□□□ 1.37
SEMA6C-201ENST00000341697 FANCIQ9NVI1 1328 aa23.61■■□□□ 1.37
SEMA6C-201ENST00000341697 ATP7AQ04656 1500 aa23.61■■□□□ 1.37
SEMA6C-201ENST00000341697 RARSP54136 660 aaKnown RBP23.61■■□□□ 1.37
SEMA6C-201ENST00000341697 SART3Q15020 963 aaKnown RBP23.6■■□□□ 1.37
SEMA6C-201ENST00000341697 PUS7Q96PZ0 661 aaKnown RBP23.6■■□□□ 1.37
SEMA6C-201ENST00000341697 IFNL2Q8IZJ0 200 aa23.6■■□□□ 1.37
SEMA6C-201ENST00000341697 CHD1LQ86WJ1 897 aa23.6■■□□□ 1.37
SEMA6C-201ENST00000341697 TCEAL9Q9UHQ7 104 aa23.59■■□□□ 1.37
SEMA6C-201ENST00000341697 EIF2AK4Q9P2K8 1649 aaKnown RBP23.59■■□□□ 1.37
SEMA6C-201ENST00000341697 AACSQ86V21 672 aa23.59■■□□□ 1.37
SEMA6C-201ENST00000341697 ZNF652Q9Y2D9 606 aa23.59■■□□□ 1.37
SEMA6C-201ENST00000341697 BICDL1Q6ZP65 573 aa23.58■■□□□ 1.37
SEMA6C-201ENST00000341697 NKTRP30414 1462 aaKnown RBP23.58■■□□□ 1.37
SEMA6C-201ENST00000341697 CHRNA2Q15822 529 aa23.58■■□□□ 1.36
SEMA6C-201ENST00000341697 TPD52L1Q16890 204 aaPredicted RBP23.58■■□□□ 1.36
SEMA6C-201ENST00000341697 SLC3A2P08195 630 aaKnown RBP23.57■■□□□ 1.36
SEMA6C-201ENST00000341697 PPP1R1BQ9UD71 204 aaPredicted RBP23.57■■□□□ 1.36
SEMA6C-201ENST00000341697 FMNL2Q96PY5 1086 aa23.57■■□□□ 1.36
SEMA6C-201ENST00000341697 TOM1O60784 492 aa23.56■■□□□ 1.36
SEMA6C-201ENST00000341697 C19orf44Q9H6X5 657 aa23.56■■□□□ 1.36
SEMA6C-201ENST00000341697 ADGRL2O95490 1459 aa23.56■■□□□ 1.36
SEMA6C-201ENST00000341697 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.55■■□□□ 1.36
SEMA6C-201ENST00000341697 DBF4Q9UBU7 674 aaPredicted RBP23.55■■□□□ 1.36
SEMA6C-201ENST00000341697 TBX22Q9Y458 520 aa23.55■■□□□ 1.36
SEMA6C-201ENST00000341697 BECN2A8MW95 431 aa23.54■■□□□ 1.36
SEMA6C-201ENST00000341697 IGHMBP2P38935 993 aaKnown RBP23.54■■□□□ 1.36
SEMA6C-201ENST00000341697 AMER1Q5JTC6 1135 aaPredicted RBP23.54■■□□□ 1.36
SEMA6C-201ENST00000341697 BICD2Q8TD16 824 aa23.54■■□□□ 1.36
SEMA6C-201ENST00000341697 ASXL1Q8IXJ9 1541 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms