RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 AXIN2Q9Y2T1 843 aa18.53■□□□□ 0.56
NECTIN1-203ENST00000341398 OVOS2A0A0G2JMS6 1433 aa18.53■□□□□ 0.56
NECTIN1-203ENST00000341398 OVOS2A0A0J9YW53 1432 aa18.53■□□□□ 0.56
NECTIN1-203ENST00000341398 OVOS2Q6IE36 1432 aa18.53■□□□□ 0.56
NECTIN1-203ENST00000341398 COL18A1P39060 1754 aa18.52■□□□□ 0.56
NECTIN1-203ENST00000341398 SBNO2Q9Y2G9 1366 aa18.52■□□□□ 0.56
NECTIN1-203ENST00000341398 CPSF1Q10570 1443 aaKnown RBP18.52■□□□□ 0.55
NECTIN1-203ENST00000341398 RGPD5Q99666 1765 aa18.51■□□□□ 0.55
NECTIN1-203ENST00000341398 CARD10Q9BWT7 1032 aa18.51■□□□□ 0.55
NECTIN1-203ENST00000341398 TONSLQ96HA7 1378 aa18.5■□□□□ 0.55
NECTIN1-203ENST00000341398 HDGFL2Q7Z4V5 671 aaPredicted RBP18.5■□□□□ 0.55
NECTIN1-203ENST00000341398 TMC1Q8TDI8 760 aa18.5■□□□□ 0.55
NECTIN1-203ENST00000341398 RREB1Q92766 1687 aa18.49■□□□□ 0.55
NECTIN1-203ENST00000341398 EXOC5O00471 708 aa18.49■□□□□ 0.55
NECTIN1-203ENST00000341398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.49■□□□□ 0.55
NECTIN1-203ENST00000341398 SBF2Q86WG5 1849 aa18.48■□□□□ 0.55
NECTIN1-203ENST00000341398 PLSCR1O15162 318 aa18.48■□□□□ 0.55
NECTIN1-203ENST00000341398 BCL11BQ9C0K0 894 aaPredicted RBP18.48■□□□□ 0.55
NECTIN1-203ENST00000341398 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
NECTIN1-203ENST00000341398 TERF2IPQ9NYB0 399 aa18.47■□□□□ 0.55
NECTIN1-203ENST00000341398 NUP188Q5SRE5 1749 aa18.46■□□□□ 0.55
NECTIN1-203ENST00000341398 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
NECTIN1-203ENST00000341398 PUS7Q96PZ0 661 aaKnown RBP18.46■□□□□ 0.55
NECTIN1-203ENST00000341398 CCDC7Q96M83 1385 aa18.46■□□□□ 0.55
NECTIN1-203ENST00000341398 LRRC37A3O60309 1634 aa18.46■□□□□ 0.55
NECTIN1-203ENST00000341398 PEAK1Q9H792 1746 aa18.45■□□□□ 0.54
NECTIN1-203ENST00000341398 WNK3Q9BYP7 1800 aa18.45■□□□□ 0.54
NECTIN1-203ENST00000341398 USP31Q70CQ4 1352 aa18.44■□□□□ 0.54
NECTIN1-203ENST00000341398 MARCH10Q8NA82 808 aaPredicted RBP18.44■□□□□ 0.54
NECTIN1-203ENST00000341398 ABCC6O95255 1503 aa18.44■□□□□ 0.54
NECTIN1-203ENST00000341398 SLC12A5Q9H2X9 1139 aa18.43■□□□□ 0.54
NECTIN1-203ENST00000341398 RGPD3A6NKT7 1758 aaPredicted RBP18.43■□□□□ 0.54
NECTIN1-203ENST00000341398 RGPD4Q7Z3J3 1758 aa18.43■□□□□ 0.54
NECTIN1-203ENST00000341398 NFAT5O94916 1531 aa18.43■□□□□ 0.54
NECTIN1-203ENST00000341398 NME9Q86XW9 330 aa18.42■□□□□ 0.54
NECTIN1-203ENST00000341398 SPON1Q9HCB6 807 aa18.42■□□□□ 0.54
NECTIN1-203ENST00000341398 BCL9O00512 1426 aa18.42■□□□□ 0.54
NECTIN1-203ENST00000341398 NLRP2Q9NX02 1062 aa18.42■□□□□ 0.54
NECTIN1-203ENST00000341398 PPP1R1BQ9UD71 204 aaPredicted RBP18.42■□□□□ 0.54
NECTIN1-203ENST00000341398 KAT6BQ8WYB5 2073 aa18.42■□□□□ 0.54
NECTIN1-203ENST00000341398 KCNQ2O43526 872 aa18.41■□□□□ 0.54
NECTIN1-203ENST00000341398 EDC4Q6P2E9 1401 aaKnown RBP18.4■□□□□ 0.54
NECTIN1-203ENST00000341398 LTN1O94822 1766 aa18.39■□□□□ 0.53
NECTIN1-203ENST00000341398 DCAF8L1A6NGE4 600 aa18.39■□□□□ 0.53
NECTIN1-203ENST00000341398 USP54Q70EL1 1684 aa18.39■□□□□ 0.53
NECTIN1-203ENST00000341398 ERBB3P21860 1342 aa18.38■□□□□ 0.53
NECTIN1-203ENST00000341398 CD163L1Q9NR16 1453 aa18.38■□□□□ 0.53
NECTIN1-203ENST00000341398 IL2RBP14784 551 aa18.38■□□□□ 0.53
NECTIN1-203ENST00000341398 ANKRD24Q8TF21 1146 aa18.37■□□□□ 0.53
NECTIN1-203ENST00000341398 NINLQ9Y2I6 1382 aa18.37■□□□□ 0.53
NECTIN1-203ENST00000341398 ST20-MTHFSA0A0A6YYL1 179 aa18.36■□□□□ 0.53
NECTIN1-203ENST00000341398 TNS2Q63HR2 1409 aa18.35■□□□□ 0.53
NECTIN1-203ENST00000341398 PTF1AQ7RTS3 328 aa18.35■□□□□ 0.53
NECTIN1-203ENST00000341398 STK32BQ9NY57 414 aa18.35■□□□□ 0.53
NECTIN1-203ENST00000341398 A0A1W2PP64 1363 aa18.35■□□□□ 0.53
NECTIN1-203ENST00000341398 TXNRD1Q16881 649 aa18.34■□□□□ 0.53
NECTIN1-203ENST00000341398 PROM2Q8N271 834 aa18.34■□□□□ 0.53
NECTIN1-203ENST00000341398 COG3Q96JB2 828 aa18.34■□□□□ 0.53
NECTIN1-203ENST00000341398 IP6K1Q92551 441 aa18.33■□□□□ 0.53
NECTIN1-203ENST00000341398 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
NECTIN1-203ENST00000341398 TESK2Q96S53 571 aa18.32■□□□□ 0.52
NECTIN1-203ENST00000341398 YY1P25490 414 aa18.31■□□□□ 0.52
NECTIN1-203ENST00000341398 ACSBG1Q96GR2 724 aa18.31■□□□□ 0.52
NECTIN1-203ENST00000341398 ANO8Q9HCE9 1232 aaPredicted RBP18.3■□□□□ 0.52
NECTIN1-203ENST00000341398 AMPHP49418 695 aa18.3■□□□□ 0.52
NECTIN1-203ENST00000341398 TMF1P82094 1093 aa18.3■□□□□ 0.52
NECTIN1-203ENST00000341398 SLC15A2Q16348 729 aa18.3■□□□□ 0.52
NECTIN1-203ENST00000341398 LTV1Q96GA3 475 aaPredicted RBP18.3■□□□□ 0.52
NECTIN1-203ENST00000341398 NHSQ6T4R5 1651 aa18.28■□□□□ 0.52
NECTIN1-203ENST00000341398 CDCA8Q53HL2 280 aa18.28■□□□□ 0.52
NECTIN1-203ENST00000341398 FAM208AQ9UK61 1670 aaKnown RBP18.27■□□□□ 0.52
NECTIN1-203ENST00000341398 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.51
NECTIN1-203ENST00000341398 ZBTB7AO95365 584 aa18.26■□□□□ 0.51
NECTIN1-203ENST00000341398 CASZ1Q86V15 1759 aa18.26■□□□□ 0.51
NECTIN1-203ENST00000341398 ANKRD36BQ8N2N9 1353 aa18.25■□□□□ 0.51
NECTIN1-203ENST00000341398 HOXC9P31274 260 aa18.25■□□□□ 0.51
NECTIN1-203ENST00000341398 ATF5Q9Y2D1 282 aaPredicted RBP18.25■□□□□ 0.51
NECTIN1-203ENST00000341398 MAP3K19Q56UN5 1328 aa18.24■□□□□ 0.51
NECTIN1-203ENST00000341398 BTAF1O14981 1849 aa18.24■□□□□ 0.51
NECTIN1-203ENST00000341398 PDGFDQ9GZP0 370 aaPredicted RBP18.23■□□□□ 0.51
NECTIN1-203ENST00000341398 MTFR1LQ9H019 292 aa18.23■□□□□ 0.51
NECTIN1-203ENST00000341398 USP47Q96K76 1375 aa18.22■□□□□ 0.51
NECTIN1-203ENST00000341398 FYB1O15117 783 aa18.21■□□□□ 0.51
NECTIN1-203ENST00000341398 ZCRB1Q8TBF4 217 aaKnown RBP18.21■□□□□ 0.51
NECTIN1-203ENST00000341398 SLC27A3Q5K4L6 730 aa18.2■□□□□ 0.5
NECTIN1-203ENST00000341398 SYTL4Q96C24 671 aaPredicted RBP18.2■□□□□ 0.5
NECTIN1-203ENST00000341398 RTL1A6NKG5 1358 aa18.19■□□□□ 0.5
NECTIN1-203ENST00000341398 FBLN1P23142 703 aa18.19■□□□□ 0.5
NECTIN1-203ENST00000341398 PTGER2P43116 358 aa18.19■□□□□ 0.5
NECTIN1-203ENST00000341398 GGNBP2Q9H3C7 697 aa18.19■□□□□ 0.5
NECTIN1-203ENST00000341398 TIMELESSQ9UNS1 1208 aa18.19■□□□□ 0.5
NECTIN1-203ENST00000341398 SMG6Q86US8 1419 aaKnown RBP18.19■□□□□ 0.5
NECTIN1-203ENST00000341398 CGNL1Q0VF96 1302 aa18.18■□□□□ 0.5
NECTIN1-203ENST00000341398 RGPD2P0DJD1 1756 aa18.18■□□□□ 0.5
NECTIN1-203ENST00000341398 RRS1Q15050 365 aaKnown RBP18.17■□□□□ 0.5
NECTIN1-203ENST00000341398 RAPGEF4Q8WZA2 1011 aa18.17■□□□□ 0.5
NECTIN1-203ENST00000341398 HMGB2P26583 209 aaKnown RBP18.17■□□□□ 0.5
NECTIN1-203ENST00000341398 PRIM1P49642 420 aaKnown RBP18.17■□□□□ 0.5
NECTIN1-203ENST00000341398 SLC16A10Q8TF71 515 aa18.16■□□□□ 0.5
NECTIN1-203ENST00000341398 LRRC4BQ9NT99 713 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms