RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 BTBD11A6QL63 1104 aa13.55□□□□□ -0.24
TNC-201ENST00000341037 RTEL1-TNFRSF6BF6WH68 1400 aa13.55□□□□□ -0.24
TNC-201ENST00000341037 HSP90B2PQ58FF3 399 aa13.55□□□□□ -0.24
TNC-201ENST00000341037 GCC1Q96CN9 775 aa13.55□□□□□ -0.24
TNC-201ENST00000341037 MPHOSPH8Q99549 860 aa13.55□□□□□ -0.24
TNC-201ENST00000341037 CCDC57Q2TAC2 916 aa13.55□□□□□ -0.24
TNC-201ENST00000341037 TRAK2O60296 914 aa13.54□□□□□ -0.24
TNC-201ENST00000341037 AACSQ86V21 672 aa13.54□□□□□ -0.24
TNC-201ENST00000341037 PIBF1Q8WXW3 757 aa13.54□□□□□ -0.24
TNC-201ENST00000341037 CCDC85AQ96PX6 553 aaPredicted RBP13.54□□□□□ -0.24
TNC-201ENST00000341037 CYP46A1Q9Y6A2 500 aa13.54□□□□□ -0.24
TNC-201ENST00000341037 CCT4P50991 539 aaKnown RBP13.54□□□□□ -0.24
TNC-201ENST00000341037 C9orf84Q5VXU9 1444 aa13.54□□□□□ -0.24
TNC-201ENST00000341037 ERBINQ96RT1 1412 aa13.53□□□□□ -0.24
TNC-201ENST00000341037 GRIN2BQ13224 1484 aa13.53□□□□□ -0.24
TNC-201ENST00000341037 SCAPERQ9BY12 1400 aa13.53□□□□□ -0.24
TNC-201ENST00000341037 NACAP1Q9BZK3 213 aa13.53□□□□□ -0.24
TNC-201ENST00000341037 TANGO6Q9C0B7 1094 aa13.53□□□□□ -0.24
TNC-201ENST00000341037 THEMISQ8N1K5 641 aaPredicted RBP13.53□□□□□ -0.24
TNC-201ENST00000341037 SRCIN1Q9C0H9 1055 aa13.53□□□□□ -0.24
TNC-201ENST00000341037 ZSCAN29Q8IWY8 852 aaPredicted RBP13.53□□□□□ -0.24
TNC-201ENST00000341037 RABEP1Q15276 862 aa13.52□□□□□ -0.24
TNC-201ENST00000341037 SLC26A8Q96RN1 970 aa13.52□□□□□ -0.24
TNC-201ENST00000341037 SERPINC1P01008 464 aa13.52□□□□□ -0.25
TNC-201ENST00000341037 RDXP35241 583 aaKnown RBP13.51□□□□□ -0.25
TNC-201ENST00000341037 PNISRQ8TF01 805 aaKnown RBP13.51□□□□□ -0.25
TNC-201ENST00000341037 MYO6Q9UM54 1294 aa13.51□□□□□ -0.25
TNC-201ENST00000341037 AKNAQ7Z591 1439 aa13.51□□□□□ -0.25
TNC-201ENST00000341037 SOGA3Q5TF21 947 aa13.51□□□□□ -0.25
TNC-201ENST00000341037 IBSPP21815 317 aaPredicted RBP13.51□□□□□ -0.25
TNC-201ENST00000341037 MRE11P49959 708 aa13.51□□□□□ -0.25
TNC-201ENST00000341037 TRIM22Q8IYM9 498 aa13.51□□□□□ -0.25
TNC-201ENST00000341037 RAI14Q9P0K7 980 aa13.51□□□□□ -0.25
TNC-201ENST00000341037 ME1P48163 572 aa13.5□□□□□ -0.25
TNC-201ENST00000341037 TDO2P48775 406 aa13.5□□□□□ -0.25
TNC-201ENST00000341037 PDCP20941 246 aa13.5□□□□□ -0.25
TNC-201ENST00000341037 CWC27Q6UX04 472 aaKnown RBP13.5□□□□□ -0.25
TNC-201ENST00000341037 ZNF692Q9BU19 519 aaPredicted RBP13.5□□□□□ -0.25
TNC-201ENST00000341037 PDCL3Q9H2J4 239 aa13.5□□□□□ -0.25
TNC-201ENST00000341037 EHBP1L1Q8N3D4 1523 aa13.5□□□□□ -0.25
TNC-201ENST00000341037 MATR3P43243 847 aaKnown RBP eCLIP13.5□□□□□ -0.25
TNC-201ENST00000341037 MCM2P49736 904 aa13.5□□□□□ -0.25
TNC-201ENST00000341037 MIS18AQ9NYP9 233 aa13.5□□□□□ -0.25
TNC-201ENST00000341037 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
TNC-201ENST00000341037 ZSCAN25Q6NSZ9 544 aa13.49□□□□□ -0.25
TNC-201ENST00000341037 MPNDQ8N594 471 aa13.49□□□□□ -0.25
TNC-201ENST00000341037 PRDM11Q9NQV5 511 aa13.49□□□□□ -0.25
TNC-201ENST00000341037 MPHOSPH10O00566 681 aaKnown RBP13.49□□□□□ -0.25
TNC-201ENST00000341037 TNMDQ9H2S6 317 aa13.49□□□□□ -0.25
TNC-201ENST00000341037 SRGAP3O43295 1099 aa13.49□□□□□ -0.25
TNC-201ENST00000341037 SEPT11Q9NVA2 429 aaKnown RBP13.49□□□□□ -0.25
TNC-201ENST00000341037 HECW1Q76N89 1606 aa13.48□□□□□ -0.25
TNC-201ENST00000341037 ZC3H6P61129 1189 aaKnown RBP13.48□□□□□ -0.25
TNC-201ENST00000341037 DEF6Q9H4E7 631 aa13.48□□□□□ -0.25
TNC-201ENST00000341037 ANKRD1Q15327 319 aa13.48□□□□□ -0.25
TNC-201ENST00000341037 IL1RAPL2Q9NP60 686 aa13.48□□□□□ -0.25
TNC-201ENST00000341037 MBD3O95983 291 aa13.48□□□□□ -0.25
TNC-201ENST00000341037 AEBP1Q8IUX7 1158 aa13.48□□□□□ -0.25
TNC-201ENST00000341037 ERCC4Q92889 916 aaPredicted RBP13.48□□□□□ -0.25
TNC-201ENST00000341037 MAP7D2Q96T17 732 aa13.48□□□□□ -0.25
TNC-201ENST00000341037 SSBP05455 408 aaKnown RBP eCLIP13.48□□□□□ -0.25
TNC-201ENST00000341037 PDRG1Q9NUG6 133 aa13.48□□□□□ -0.25
TNC-201ENST00000341037 ANKLE2Q86XL3 938 aa13.48□□□□□ -0.25
TNC-201ENST00000341037 KIAA1107Q9UPP5 1409 aa13.48□□□□□ -0.25
TNC-201ENST00000341037 ZNHIT6Q9NWK9 470 aaKnown RBP13.47□□□□□ -0.25
TNC-201ENST00000341037 RAPGEF3O95398 923 aa13.47□□□□□ -0.25
TNC-201ENST00000341037 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
TNC-201ENST00000341037 USP5P45974 858 aa13.47□□□□□ -0.25
TNC-201ENST00000341037 JAKMIP1Q96N16 626 aaKnown RBP13.47□□□□□ -0.25
TNC-201ENST00000341037 NOM1Q5C9Z4 860 aaKnown RBP13.47□□□□□ -0.25
TNC-201ENST00000341037 PPFIBP1Q86W92 1011 aa13.47□□□□□ -0.25
TNC-201ENST00000341037 CHD1LQ86WJ1 897 aa13.47□□□□□ -0.25
TNC-201ENST00000341037 JMYQ8N9B5 988 aa13.47□□□□□ -0.25
TNC-201ENST00000341037 LRP2BPQ9P2M1 347 aa13.47□□□□□ -0.25
TNC-201ENST00000341037 ZNF76P36508 570 aa13.46□□□□□ -0.25
TNC-201ENST00000341037 STIM1Q13586 685 aa13.46□□□□□ -0.25
TNC-201ENST00000341037 CCP110O43303 1012 aa13.46□□□□□ -0.25
TNC-201ENST00000341037 PIP4K2AP48426 406 aaPredicted RBP13.46□□□□□ -0.25
TNC-201ENST00000341037 MVPQ14764 893 aaKnown RBP13.46□□□□□ -0.25
TNC-201ENST00000341037 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
TNC-201ENST00000341037 NOL7Q9UMY1 257 aaKnown RBP13.46□□□□□ -0.25
TNC-201ENST00000341037 FAM177A1Q8N128 213 aaPredicted RBP13.46□□□□□ -0.25
TNC-201ENST00000341037 UBAC1Q9BSL1 405 aa13.46□□□□□ -0.25
TNC-201ENST00000341037 K7ELQ4 463 aaPredicted RBP13.46□□□□□ -0.26
TNC-201ENST00000341037 IDH1O75874 414 aaKnown RBP13.45□□□□□ -0.26
TNC-201ENST00000341037 NEFHP12036 1026 aa13.45□□□□□ -0.26
TNC-201ENST00000341037 IGHMBP2P38935 993 aaKnown RBP13.45□□□□□ -0.26
TNC-201ENST00000341037 PDE3AQ14432 1141 aa13.45□□□□□ -0.26
TNC-201ENST00000341037 ATF7IPQ6VMQ6 1270 aa13.45□□□□□ -0.26
TNC-201ENST00000341037 DACH1Q9UI36 760 aa13.45□□□□□ -0.26
TNC-201ENST00000341037 DCTN1Q14203 1278 aa13.45□□□□□ -0.26
TNC-201ENST00000341037 NBPF8Q3BBV2 869 aa13.45□□□□□ -0.26
TNC-201ENST00000341037 AXDND1Q5T1B0 1012 aaPredicted RBP13.45□□□□□ -0.26
TNC-201ENST00000341037 SUPT6HQ7KZ85 1726 aaKnown RBP13.45□□□□□ -0.26
TNC-201ENST00000341037 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
TNC-201ENST00000341037 NESP48681 1621 aa13.44□□□□□ -0.26
TNC-201ENST00000341037 GNAT3A8MTJ3 354 aa13.44□□□□□ -0.26
TNC-201ENST00000341037 CCDC192P0DO97 292 aa13.44□□□□□ -0.26
TNC-201ENST00000341037 CCDC181Q5TID7 509 aa13.44□□□□□ -0.26
TNC-201ENST00000341037 WDR63Q8IWG1 891 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms