RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 MORC1Q86VD1 984 aa18.06■□□□□ 0.48
TUBD1-202ENST00000340993 CPDO75976 1380 aa18.06■□□□□ 0.48
TUBD1-202ENST00000340993 LMO7Q8WWI1 1683 aa18.05■□□□□ 0.48
TUBD1-202ENST00000340993 MAP3K19Q56UN5 1328 aa18.05■□□□□ 0.48
TUBD1-202ENST00000340993 COL18A1P39060 1754 aa18.05■□□□□ 0.48
TUBD1-202ENST00000340993 ZNF316A6NFI3 1004 aaPredicted RBP18.05■□□□□ 0.48
TUBD1-202ENST00000340993 AMPHP49418 695 aa18.05■□□□□ 0.48
TUBD1-202ENST00000340993 AMER1Q5JTC6 1135 aaPredicted RBP18.05■□□□□ 0.48
TUBD1-202ENST00000340993 EMILIN1Q9Y6C2 1016 aa18.05■□□□□ 0.48
TUBD1-202ENST00000340993 PER1O15534 1290 aaPredicted RBP18.04■□□□□ 0.48
TUBD1-202ENST00000340993 CSB-PGBD3P0DP91 1061 aa18.04■□□□□ 0.48
TUBD1-202ENST00000340993 LARP1Q6PKG0 1096 aaKnown RBP18.04■□□□□ 0.48
TUBD1-202ENST00000340993 ILDR2Q71H61 639 aa18.04■□□□□ 0.48
TUBD1-202ENST00000340993 TRPC5Q9UL62 973 aaPredicted RBP18.04■□□□□ 0.48
TUBD1-202ENST00000340993 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.04■□□□□ 0.48
TUBD1-202ENST00000340993 A0A0G2JS52 829 aa18.03■□□□□ 0.48
TUBD1-202ENST00000340993 MYT1Q01538 1121 aa18.03■□□□□ 0.48
TUBD1-202ENST00000340993 PEAK1Q9H792 1746 aa18.02■□□□□ 0.48
TUBD1-202ENST00000340993 ATRNO75882 1429 aa18.02■□□□□ 0.48
TUBD1-202ENST00000340993 RXRBP28702 533 aa18.02■□□□□ 0.47
TUBD1-202ENST00000340993 COL5A2P05997 1499 aaPredicted RBP18.01■□□□□ 0.47
TUBD1-202ENST00000340993 AATKQ6ZMQ8 1374 aa18.01■□□□□ 0.47
TUBD1-202ENST00000340993 RGPD2P0DJD1 1756 aa18■□□□□ 0.47
TUBD1-202ENST00000340993 GLI3P10071 1580 aa18■□□□□ 0.47
TUBD1-202ENST00000340993 HOXC9P31274 260 aa17.99■□□□□ 0.47
TUBD1-202ENST00000340993 TOM1L2Q6ZVM7 507 aa17.99■□□□□ 0.47
TUBD1-202ENST00000340993 FAM98CQ17RN3 349 aaKnown RBP17.99■□□□□ 0.47
TUBD1-202ENST00000340993 GJD4Q96KN9 370 aaPredicted RBP17.99■□□□□ 0.47
TUBD1-202ENST00000340993 VPS72Q15906 364 aa17.98■□□□□ 0.47
TUBD1-202ENST00000340993 HSP90AB2PQ58FF8 381 aa17.98■□□□□ 0.47
TUBD1-202ENST00000340993 ANKRD24Q8TF21 1146 aa17.98■□□□□ 0.47
TUBD1-202ENST00000340993 NSD2O96028 1365 aa17.98■□□□□ 0.47
TUBD1-202ENST00000340993 RBM6P78332 1123 aaKnown RBP17.97■□□□□ 0.47
TUBD1-202ENST00000340993 NLRP2Q9NX02 1062 aa17.97■□□□□ 0.47
TUBD1-202ENST00000340993 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
TUBD1-202ENST00000340993 IP6K1Q92551 441 aa17.96■□□□□ 0.47
TUBD1-202ENST00000340993 USHBP1Q8N6Y0 703 aa17.96■□□□□ 0.47
TUBD1-202ENST00000340993 SPATA31A5Q5VU36 1347 aa17.95■□□□□ 0.46
TUBD1-202ENST00000340993 SPATA31A7Q8IWB4 1347 aa17.95■□□□□ 0.46
TUBD1-202ENST00000340993 EP400Q96L91 3159 aa17.95■□□□□ 0.46
TUBD1-202ENST00000340993 RGS12O14924 1447 aa17.94■□□□□ 0.46
TUBD1-202ENST00000340993 ERBB3P21860 1342 aa17.94■□□□□ 0.46
TUBD1-202ENST00000340993 SPATA31A1Q5TZJ5 1347 aa17.94■□□□□ 0.46
TUBD1-202ENST00000340993 WDR17Q8IZU2 1322 aa17.94■□□□□ 0.46
TUBD1-202ENST00000340993 FLT4P35916 1363 aa17.93■□□□□ 0.46
TUBD1-202ENST00000340993 BRWD3Q6RI45 1802 aa17.93■□□□□ 0.46
TUBD1-202ENST00000340993 CRB1P82279 1406 aa17.92■□□□□ 0.46
TUBD1-202ENST00000340993 BLMP54132 1417 aaPredicted RBP17.91■□□□□ 0.46
TUBD1-202ENST00000340993 RTL1A6NKG5 1358 aa17.91■□□□□ 0.46
TUBD1-202ENST00000340993 MTHFSP49914 203 aa17.91■□□□□ 0.46
TUBD1-202ENST00000340993 SEPT12Q8IYM1 358 aa17.91■□□□□ 0.46
TUBD1-202ENST00000340993 FAM182BQ5T319 152 aa17.9■□□□□ 0.46
TUBD1-202ENST00000340993 TCP11L2Q8N4U5 519 aa17.9■□□□□ 0.46
TUBD1-202ENST00000340993 ABCC6O95255 1503 aa17.9■□□□□ 0.46
TUBD1-202ENST00000340993 SMG6Q86US8 1419 aaKnown RBP17.89■□□□□ 0.45
TUBD1-202ENST00000340993 NBPF6Q5VWK0 638 aa17.88■□□□□ 0.45
TUBD1-202ENST00000340993 NBPF4Q96M43 638 aa17.88■□□□□ 0.45
TUBD1-202ENST00000340993 INSRP06213 1382 aa17.88■□□□□ 0.45
TUBD1-202ENST00000340993 WNK3Q9BYP7 1800 aa17.88■□□□□ 0.45
TUBD1-202ENST00000340993 NPC1L1Q9UHC9 1359 aa17.87■□□□□ 0.45
TUBD1-202ENST00000340993 EIF4A2Q14240 407 aaKnown RBP17.86■□□□□ 0.45
TUBD1-202ENST00000340993 CARD10Q9BWT7 1032 aa17.86■□□□□ 0.45
TUBD1-202ENST00000340993 FAM208AQ9UK61 1670 aaKnown RBP17.86■□□□□ 0.45
TUBD1-202ENST00000340993 PPP2R1AP30153 589 aa17.86■□□□□ 0.45
TUBD1-202ENST00000340993 KAT6BQ8WYB5 2073 aa17.85■□□□□ 0.45
TUBD1-202ENST00000340993 CDK12Q9NYV4 1490 aaPredicted RBP17.85■□□□□ 0.45
TUBD1-202ENST00000340993 THSD7AQ9UPZ6 1657 aa17.84■□□□□ 0.45
TUBD1-202ENST00000340993 PARD3Q8TEW0 1356 aa17.82■□□□□ 0.44
TUBD1-202ENST00000340993 EYA1Q99502 592 aa17.82■□□□□ 0.44
TUBD1-202ENST00000340993 LRRC37A3O60309 1634 aa17.82■□□□□ 0.44
TUBD1-202ENST00000340993 KIF24Q5T7B8 1368 aa17.82■□□□□ 0.44
TUBD1-202ENST00000340993 BARGINQ6ZT62 677 aa17.81■□□□□ 0.44
TUBD1-202ENST00000340993 MEGF6O75095 1541 aa17.8■□□□□ 0.44
TUBD1-202ENST00000340993 U2SURPO15042 1029 aaKnown RBP17.8■□□□□ 0.44
TUBD1-202ENST00000340993 IL2RBP14784 551 aa17.8■□□□□ 0.44
TUBD1-202ENST00000340993 KRT27Q7Z3Y8 459 aa17.8■□□□□ 0.44
TUBD1-202ENST00000340993 AEBP1Q8IUX7 1158 aa17.8■□□□□ 0.44
TUBD1-202ENST00000340993 THRAP3Q9Y2W1 955 aaKnown RBP17.8■□□□□ 0.44
TUBD1-202ENST00000340993 PARP4Q9UKK3 1724 aaKnown RBP17.8■□□□□ 0.44
TUBD1-202ENST00000340993 HMOX1P09601 288 aa17.79■□□□□ 0.44
TUBD1-202ENST00000340993 PDE3BQ13370 1112 aa17.79■□□□□ 0.44
TUBD1-202ENST00000340993 DDB1Q16531 1140 aa17.79■□□□□ 0.44
TUBD1-202ENST00000340993 ONECUT3O60422 494 aaPredicted RBP17.78■□□□□ 0.44
TUBD1-202ENST00000340993 DIAPH1O60610 1272 aaKnown RBP17.78■□□□□ 0.44
TUBD1-202ENST00000340993 IL13P35225 146 aa17.78■□□□□ 0.44
TUBD1-202ENST00000340993 DDX54Q8TDD1 881 aaKnown RBP17.77■□□□□ 0.44
TUBD1-202ENST00000340993 RAPGEF4Q8WZA2 1011 aa17.77■□□□□ 0.44
TUBD1-202ENST00000340993 PRKRIP1Q9H875 184 aaPredicted RBP17.77■□□□□ 0.44
TUBD1-202ENST00000340993 DISP2A7MBM2 1401 aa17.77■□□□□ 0.44
TUBD1-202ENST00000340993 COL3A1P02461 1466 aaPredicted RBP17.76■□□□□ 0.43
TUBD1-202ENST00000340993 RALBP1Q15311 655 aa17.76■□□□□ 0.43
TUBD1-202ENST00000340993 SULT6B1Q6IMI4 303 aa17.76■□□□□ 0.43
TUBD1-202ENST00000340993 CFAP53Q96M91 514 aa17.76■□□□□ 0.43
TUBD1-202ENST00000340993 EXOC5O00471 708 aa17.75■□□□□ 0.43
TUBD1-202ENST00000340993 TATP17735 454 aaPredicted RBP17.75■□□□□ 0.43
TUBD1-202ENST00000340993 MYBBP1AQ9BQG0 1328 aaKnown RBP17.74■□□□□ 0.43
TUBD1-202ENST00000340993 RGPD1P0DJD0 1748 aa17.74■□□□□ 0.43
TUBD1-202ENST00000340993 IGSF1Q8N6C5 1336 aa17.74■□□□□ 0.43
TUBD1-202ENST00000340993 ANP32CO43423 234 aa17.74■□□□□ 0.43
TUBD1-202ENST00000340993 MARCH10Q8NA82 808 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms