RNA–Protein interactions for RNA: ENST00000340433.3

RTL4-201, Transcript of retrotransposon Gag like 4, humanhuman

APPRIS P1 BASIC

Gene RTL4, Length 2,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4-201ENST00000340433 MS4A1P11836 297 aa3.89□□□□□ -1.79
RTL4-201ENST00000340433 TMUB1Q9BVT8 246 aa3.89□□□□□ -1.79
RTL4-201ENST00000340433 KDM5DQ9BY66 1539 aa3.88□□□□□ -1.79
RTL4-201ENST00000340433 IQGAP1P46940 1657 aa3.88□□□□□ -1.79
RTL4-201ENST00000340433 CLTCQ00610 1675 aaKnown RBP3.88□□□□□ -1.79
RTL4-201ENST00000340433 NRG2O14511 850 aaPredicted RBP3.88□□□□□ -1.79
RTL4-201ENST00000340433 ONECUT3O60422 494 aaPredicted RBP3.88□□□□□ -1.79
RTL4-201ENST00000340433 CEBPAP49715 358 aaPredicted RBP3.88□□□□□ -1.79
RTL4-201ENST00000340433 RSPH4AQ5TD94 716 aa3.88□□□□□ -1.79
RTL4-201ENST00000340433 SEPT9Q9UHD8 586 aaPredicted RBP3.88□□□□□ -1.79
RTL4-201ENST00000340433 VPS9D1Q9Y2B5 631 aa3.88□□□□□ -1.79
RTL4-201ENST00000340433 A2MP01023 1474 aa3.88□□□□□ -1.79
RTL4-201ENST00000340433 NCOA2Q15596 1464 aa3.88□□□□□ -1.79
RTL4-201ENST00000340433 FAM135BQ49AJ0 1406 aa3.88□□□□□ -1.79
RTL4-201ENST00000340433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.88□□□□□ -1.79
RTL4-201ENST00000340433 TSPY4P0CV99 314 aa3.88□□□□□ -1.79
RTL4-201ENST00000340433 TSPY10P0CW01 314 aa3.88□□□□□ -1.79
RTL4-201ENST00000340433 SSTR3P32745 418 aaPredicted RBP3.88□□□□□ -1.79
RTL4-201ENST00000340433 C1orf115Q9H7X2 142 aa3.88□□□□□ -1.79
RTL4-201ENST00000340433 RABGEF1Q9UJ41 708 aa3.88□□□□□ -1.79
RTL4-201ENST00000340433 NLRP1Q9C000 1473 aa3.88□□□□□ -1.79
RTL4-201ENST00000340433 ZNF644Q9H582 1327 aaPredicted RBP3.87□□□□□ -1.79
RTL4-201ENST00000340433 TOM1O60784 492 aa3.87□□□□□ -1.79
RTL4-201ENST00000340433 GGT6Q6P531 493 aa3.87□□□□□ -1.79
RTL4-201ENST00000340433 ZNF775Q96BV0 537 aaPredicted RBP3.87□□□□□ -1.79
RTL4-201ENST00000340433 SLC4A5Q9BY07 1137 aa3.87□□□□□ -1.79
RTL4-201ENST00000340433 CCDC141Q6ZP82 1450 aa3.87□□□□□ -1.79
RTL4-201ENST00000340433 LRRC9Q6ZRR7 1453 aa3.87□□□□□ -1.79
RTL4-201ENST00000340433 RTEL1-TNFRSF6BF6WH68 1400 aa3.87□□□□□ -1.79
RTL4-201ENST00000340433 PLEKHG3A1L390 1219 aa3.87□□□□□ -1.79
RTL4-201ENST00000340433 GFRA3O60609 400 aa3.87□□□□□ -1.79
RTL4-201ENST00000340433 DNAJB2P25686 324 aa3.87□□□□□ -1.79
RTL4-201ENST00000340433 FAM217BQ9NTX9 383 aaPredicted RBP3.87□□□□□ -1.79
RTL4-201ENST00000340433 STK17AQ9UEE5 414 aa3.87□□□□□ -1.79
RTL4-201ENST00000340433 MAP3K1Q13233 1512 aa3.87□□□□□ -1.79
RTL4-201ENST00000340433 LRRC7Q96NW7 1537 aa3.87□□□□□ -1.79
RTL4-201ENST00000340433 UBAP1LF5GYI3 381 aa3.86□□□□□ -1.79
RTL4-201ENST00000340433 HSPA1LP34931 641 aa3.86□□□□□ -1.79
RTL4-201ENST00000340433 RGS17Q9UGC6 210 aaPredicted RBP3.86□□□□□ -1.79
RTL4-201ENST00000340433 PZPP20742 1482 aa3.86□□□□□ -1.79
RTL4-201ENST00000340433 MBD5Q9P267 1494 aa3.86□□□□□ -1.79
RTL4-201ENST00000340433 ABCC3O15438 1527 aa3.86□□□□□ -1.79
RTL4-201ENST00000340433 NWD1Q149M9 1564 aa3.86□□□□□ -1.79
RTL4-201ENST00000340433 DDRGK1Q96HY6 314 aa3.86□□□□□ -1.79
RTL4-201ENST00000340433 TMEM134Q9H6X4 195 aa3.86□□□□□ -1.79
RTL4-201ENST00000340433 ZMYM3Q14202 1370 aa3.86□□□□□ -1.79
RTL4-201ENST00000340433 DHX29Q7Z478 1369 aaKnown RBP3.86□□□□□ -1.79
RTL4-201ENST00000340433 SHPRHQ149N8 1683 aa3.85□□□□□ -1.79
RTL4-201ENST00000340433 DDX11L8A8MPP1 907 aa3.85□□□□□ -1.79
RTL4-201ENST00000340433 KIF3BO15066 747 aa3.85□□□□□ -1.79
RTL4-201ENST00000340433 PTPN5P54829 565 aa3.85□□□□□ -1.79
RTL4-201ENST00000340433 BEGAINQ9BUH8 593 aa3.85□□□□□ -1.79
RTL4-201ENST00000340433 ZNF335Q9H4Z2 1342 aaPredicted RBP3.85□□□□□ -1.79
RTL4-201ENST00000340433 MYOM3Q5VTT5 1437 aa3.85□□□□□ -1.79
RTL4-201ENST00000340433 MIA2Q96PC5 1412 aa3.85□□□□□ -1.79
RTL4-201ENST00000340433 ARHGAP23Q9P227 1491 aa3.85□□□□□ -1.79
RTL4-201ENST00000340433 ARHGEF5Q12774 1597 aa3.85□□□□□ -1.79
RTL4-201ENST00000340433 SETD1AO15047 1707 aaKnown RBP3.85□□□□□ -1.79
RTL4-201ENST00000340433 BHMG1C9JSJ3 638 aaPredicted RBP3.85□□□□□ -1.79
RTL4-201ENST00000340433 SWT1Q5T5J6 900 aaKnown RBP3.85□□□□□ -1.79
RTL4-201ENST00000340433 KANK4Q5T7N3 995 aaPredicted RBP3.85□□□□□ -1.79
RTL4-201ENST00000340433 ZNF428Q96B54 188 aa3.85□□□□□ -1.79
RTL4-201ENST00000340433 SLIT1O75093 1534 aa3.85□□□□□ -1.79
RTL4-201ENST00000340433 LRP5O75197 1615 aa3.85□□□□□ -1.79
RTL4-201ENST00000340433 IGSF3O75054 1194 aa3.84□□□□□ -1.79
RTL4-201ENST00000340433 ITGBL1O95965 494 aaPredicted RBP3.84□□□□□ -1.79
RTL4-201ENST00000340433 FAM98CQ17RN3 349 aaKnown RBP3.84□□□□□ -1.79
RTL4-201ENST00000340433 NECTIN2Q92692 538 aa3.84□□□□□ -1.79
RTL4-201ENST00000340433 NBPF3Q9H094 633 aa3.84□□□□□ -1.79
RTL4-201ENST00000340433 WASHC2CQ9Y4E1 1318 aa3.84□□□□□ -1.79
RTL4-201ENST00000340433 MRPL50Q8N5N7 158 aaKnown RBP3.84□□□□□ -1.8
RTL4-201ENST00000340433 FGD6Q6ZV73 1430 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 NCOA3Q9Y6Q9 1424 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 THSD4Q6ZMP0 1018 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 SAMD7Q7Z3H4 446 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 RDH13Q8NBN7 331 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 UBR1Q8IWV7 1749 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 EIF2AK4Q9P2K8 1649 aaKnown RBP3.83□□□□□ -1.8
RTL4-201ENST00000340433 MAST1Q9Y2H9 1570 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 LCE2BO14633 110 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 RNF40O75150 1001 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 CD46P15529 392 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 HDGFP51858 240 aaKnown RBP3.83□□□□□ -1.8
RTL4-201ENST00000340433 LAPTM4BQ86VI4 370 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 SULF1Q8IWU6 871 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 ZFRQ96KR1 1074 aaKnown RBP3.83□□□□□ -1.8
RTL4-201ENST00000340433 LAMC1P11047 1609 aa3.83□□□□□ -1.8
RTL4-201ENST00000340433 AHDC1Q5TGY3 1603 aaPredicted RBP3.83□□□□□ -1.8
RTL4-201ENST00000340433 NPHP4O75161 1426 aaPredicted RBP3.82□□□□□ -1.8
RTL4-201ENST00000340433 TNRQ92752 1358 aa3.82□□□□□ -1.8
RTL4-201ENST00000340433 COL16A1Q07092 1604 aaPredicted RBP3.82□□□□□ -1.8
RTL4-201ENST00000340433 PTPN23Q9H3S7 1636 aa3.82□□□□□ -1.8
RTL4-201ENST00000340433 DUOX2Q9NRD8 1548 aa3.82□□□□□ -1.8
RTL4-201ENST00000340433 NKTRP30414 1462 aaKnown RBP3.82□□□□□ -1.8
RTL4-201ENST00000340433 KIF15Q9NS87 1388 aa3.81□□□□□ -1.8
RTL4-201ENST00000340433 GOLGA8CPA6NN73 597 aa3.81□□□□□ -1.8
RTL4-201ENST00000340433 SLC10A3P09131 477 aa3.81□□□□□ -1.8
RTL4-201ENST00000340433 FAM50AQ14320 339 aaKnown RBP3.81□□□□□ -1.8
RTL4-201ENST00000340433 TBC1D2Q9BYX2 928 aa3.81□□□□□ -1.8
RTL4-201ENST00000340433 RRP7BPQ9NSQ0 103 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms