RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 LTN1O94822 1766 aa20.41■□□□□ 0.86
ERCC1-203ENST00000340192 OVOS2A0A0J9YW53 1432 aa20.39■□□□□ 0.85
ERCC1-203ENST00000340192 OVOS2Q6IE36 1432 aa20.39■□□□□ 0.85
ERCC1-203ENST00000340192 AXIN2Q9Y2T1 843 aa20.39■□□□□ 0.85
ERCC1-203ENST00000340192 CRB1P82279 1406 aa20.38■□□□□ 0.85
ERCC1-203ENST00000340192 EIF4G2P78344 907 aaKnown RBP eCLIP20.38■□□□□ 0.85
ERCC1-203ENST00000340192 ABCC6O95255 1503 aa20.37■□□□□ 0.85
ERCC1-203ENST00000340192 HSPA5P11021 654 aaKnown RBP20.36■□□□□ 0.85
ERCC1-203ENST00000340192 BARGINQ6ZT62 677 aa20.36■□□□□ 0.85
ERCC1-203ENST00000340192 TCP11L2Q8N4U5 519 aa20.36■□□□□ 0.85
ERCC1-203ENST00000340192 KIF20BQ96Q89 1820 aa20.35■□□□□ 0.85
ERCC1-203ENST00000340192 CCDC125Q86Z20 511 aa20.35■□□□□ 0.85
ERCC1-203ENST00000340192 THRAP3Q9Y2W1 955 aaKnown RBP20.34■□□□□ 0.85
ERCC1-203ENST00000340192 BLMP54132 1417 aaPredicted RBP20.34■□□□□ 0.85
ERCC1-203ENST00000340192 WNK3Q9BYP7 1800 aa20.34■□□□□ 0.85
ERCC1-203ENST00000340192 PARP4Q9UKK3 1724 aaKnown RBP20.33■□□□□ 0.85
ERCC1-203ENST00000340192 WDR17Q8IZU2 1322 aa20.33■□□□□ 0.85
ERCC1-203ENST00000340192 TOM1L2Q6ZVM7 507 aa20.33■□□□□ 0.85
ERCC1-203ENST00000340192 FAM182BQ5T319 152 aa20.32■□□□□ 0.84
ERCC1-203ENST00000340192 COG3Q96JB2 828 aa20.32■□□□□ 0.84
ERCC1-203ENST00000340192 FYB1O15117 783 aa20.3■□□□□ 0.84
ERCC1-203ENST00000340192 CSB-PGBD3P0DP91 1061 aa20.3■□□□□ 0.84
ERCC1-203ENST00000340192 POLR3GLQ9BT43 218 aa20.29■□□□□ 0.84
ERCC1-203ENST00000340192 CARD14Q9BXL6 1004 aa20.29■□□□□ 0.84
ERCC1-203ENST00000340192 RGPD1P0DJD0 1748 aa20.29■□□□□ 0.84
ERCC1-203ENST00000340192 LRRC37A3O60309 1634 aa20.28■□□□□ 0.84
ERCC1-203ENST00000340192 GGNBP2Q9H3C7 697 aa20.28■□□□□ 0.84
ERCC1-203ENST00000340192 NSD3Q9BZ95 1437 aa20.27■□□□□ 0.84
ERCC1-203ENST00000340192 PDE3BQ13370 1112 aa20.27■□□□□ 0.84
ERCC1-203ENST00000340192 SF3B2Q13435 895 aaKnown RBP20.27■□□□□ 0.84
ERCC1-203ENST00000340192 ERBB3P21860 1342 aa20.27■□□□□ 0.83
ERCC1-203ENST00000340192 CARD10Q9BWT7 1032 aa20.26■□□□□ 0.83
ERCC1-203ENST00000340192 TNS1Q9HBL0 1735 aaKnown RBP20.25■□□□□ 0.83
ERCC1-203ENST00000340192 FBLN1P23142 703 aa20.25■□□□□ 0.83
ERCC1-203ENST00000340192 FAM196AQ6ZSG2 479 aa20.24■□□□□ 0.83
ERCC1-203ENST00000340192 IP6K1Q92551 441 aa20.24■□□□□ 0.83
ERCC1-203ENST00000340192 MAP3K19Q56UN5 1328 aa20.24■□□□□ 0.83
ERCC1-203ENST00000340192 FAM208AQ9UK61 1670 aaKnown RBP20.23■□□□□ 0.83
ERCC1-203ENST00000340192 DEFB132Q7Z7B7 95 aa20.23■□□□□ 0.83
ERCC1-203ENST00000340192 ANKRD24Q8TF21 1146 aa20.23■□□□□ 0.83
ERCC1-203ENST00000340192 CCDC7Q96M83 1385 aa20.22■□□□□ 0.83
ERCC1-203ENST00000340192 DISP2A7MBM2 1401 aa20.22■□□□□ 0.83
ERCC1-203ENST00000340192 C11orf95C9JLR9 678 aaPredicted RBP20.22■□□□□ 0.83
ERCC1-203ENST00000340192 NLRP2Q9NX02 1062 aa20.22■□□□□ 0.83
ERCC1-203ENST00000340192 PEAK1Q9H792 1746 aa20.22■□□□□ 0.83
ERCC1-203ENST00000340192 AMPHP49418 695 aa20.21■□□□□ 0.83
ERCC1-203ENST00000340192 DDB1Q16531 1140 aa20.21■□□□□ 0.83
ERCC1-203ENST00000340192 CDCA7Q9BWT1 371 aaPredicted RBP20.21■□□□□ 0.83
ERCC1-203ENST00000340192 HOXC9P31274 260 aa20.2■□□□□ 0.82
ERCC1-203ENST00000340192 RRS1Q15050 365 aaKnown RBP20.2■□□□□ 0.82
ERCC1-203ENST00000340192 ANKRD26Q9UPS8 1709 aa20.19■□□□□ 0.82
ERCC1-203ENST00000340192 RGPD2P0DJD1 1756 aa20.19■□□□□ 0.82
ERCC1-203ENST00000340192 CGNL1Q0VF96 1302 aa20.19■□□□□ 0.82
ERCC1-203ENST00000340192 RTL1A6NKG5 1358 aa20.19■□□□□ 0.82
ERCC1-203ENST00000340192 SBF2Q86WG5 1849 aa20.18■□□□□ 0.82
ERCC1-203ENST00000340192 TRIM37O94972 964 aa20.18■□□□□ 0.82
ERCC1-203ENST00000340192 BAG6P46379 1132 aa20.18■□□□□ 0.82
ERCC1-203ENST00000340192 LTV1Q96GA3 475 aaPredicted RBP20.18■□□□□ 0.82
ERCC1-203ENST00000340192 OVOS2A0A0G2JMS6 1433 aa20.18■□□□□ 0.82
ERCC1-203ENST00000340192 PANK3Q9H999 370 aa20.16■□□□□ 0.82
ERCC1-203ENST00000340192 MAP2P11137 1827 aaKnown RBP20.15■□□□□ 0.82
ERCC1-203ENST00000340192 TNS2Q63HR2 1409 aa20.14■□□□□ 0.81
ERCC1-203ENST00000340192 EXOC5O00471 708 aa20.14■□□□□ 0.81
ERCC1-203ENST00000340192 IL2RBP14784 551 aa20.14■□□□□ 0.81
ERCC1-203ENST00000340192 EN1Q05925 392 aaPredicted RBP20.14■□□□□ 0.81
ERCC1-203ENST00000340192 MARCH10Q8NA82 808 aaPredicted RBP20.14■□□□□ 0.81
ERCC1-203ENST00000340192 KIF7Q2M1P5 1343 aa20.13■□□□□ 0.81
ERCC1-203ENST00000340192 FLT4P35916 1363 aa20.12■□□□□ 0.81
ERCC1-203ENST00000340192 KIF24Q5T7B8 1368 aa20.12■□□□□ 0.81
ERCC1-203ENST00000340192 APBA3O96018 575 aa20.11■□□□□ 0.81
ERCC1-203ENST00000340192 EMILIN1Q9Y6C2 1016 aa20.11■□□□□ 0.81
ERCC1-203ENST00000340192 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
ERCC1-203ENST00000340192 INSRP06213 1382 aa20.1■□□□□ 0.81
ERCC1-203ENST00000340192 HSP90AB2PQ58FF8 381 aa20.1■□□□□ 0.81
ERCC1-203ENST00000340192 BCL9O00512 1426 aa20.1■□□□□ 0.81
ERCC1-203ENST00000340192 RREB1Q92766 1687 aa20.08■□□□□ 0.81
ERCC1-203ENST00000340192 PPM1GO15355 546 aaPredicted RBP20.08■□□□□ 0.81
ERCC1-203ENST00000340192 EZH2Q15910 746 aaKnown RBP20.08■□□□□ 0.81
ERCC1-203ENST00000340192 CAMKK2Q96RR4 588 aa20.08■□□□□ 0.81
ERCC1-203ENST00000340192 TNNT2P45379 298 aaPredicted RBP20.07■□□□□ 0.8
ERCC1-203ENST00000340192 NBPF6Q5VWK0 638 aa20.07■□□□□ 0.8
ERCC1-203ENST00000340192 NBPF4Q96M43 638 aa20.07■□□□□ 0.8
ERCC1-203ENST00000340192 SRCAPQ6ZRS2 3230 aa20.07■□□□□ 0.8
ERCC1-203ENST00000340192 NSD2O96028 1365 aa20.07■□□□□ 0.8
ERCC1-203ENST00000340192 RGPD3A6NKT7 1758 aaPredicted RBP20.06■□□□□ 0.8
ERCC1-203ENST00000340192 RGPD4Q7Z3J3 1758 aa20.06■□□□□ 0.8
ERCC1-203ENST00000340192 SHANK3Q9BYB0 1731 aa20.05■□□□□ 0.8
ERCC1-203ENST00000340192 PTF1AQ7RTS3 328 aa20.05■□□□□ 0.8
ERCC1-203ENST00000340192 USHBP1Q8N6Y0 703 aa20.05■□□□□ 0.8
ERCC1-203ENST00000340192 BCL11BQ9C0K0 894 aaPredicted RBP20.05■□□□□ 0.8
ERCC1-203ENST00000340192 KNSTRNQ9Y448 316 aa20.05■□□□□ 0.8
ERCC1-203ENST00000340192 MEGF6O75095 1541 aa20.05■□□□□ 0.8
ERCC1-203ENST00000340192 PARD3Q8TEW0 1356 aa20.05■□□□□ 0.8
ERCC1-203ENST00000340192 NUP188Q5SRE5 1749 aa20.05■□□□□ 0.8
ERCC1-203ENST00000340192 NHSQ6T4R5 1651 aa20.04■□□□□ 0.8
ERCC1-203ENST00000340192 POLKQ9UBT6 870 aa20.04■□□□□ 0.8
ERCC1-203ENST00000340192 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.8
ERCC1-203ENST00000340192 DDX54Q8TDD1 881 aaKnown RBP20.01■□□□□ 0.79
ERCC1-203ENST00000340192 MORC1Q86VD1 984 aa20■□□□□ 0.79
ERCC1-203ENST00000340192 ACSBG1Q96GR2 724 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms