RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 TRIM6-TRIM34B2RNG4 842 aa11.37□□□□□ -0.59
RPGR-202ENST00000339363 DZIP1LQ8IYY4 767 aaKnown RBP11.37□□□□□ -0.59
RPGR-202ENST00000339363 MYRIPQ8NFW9 859 aa11.37□□□□□ -0.59
RPGR-202ENST00000339363 PLEKHF1Q96S99 279 aa11.37□□□□□ -0.59
RPGR-202ENST00000339363 TRIM34Q9BYJ4 488 aa11.37□□□□□ -0.59
RPGR-202ENST00000339363 RBSNQ9H1K0 784 aa11.37□□□□□ -0.59
RPGR-202ENST00000339363 SMC4Q9NTJ3 1288 aa11.37□□□□□ -0.59
RPGR-202ENST00000339363 MAP3K4Q9Y6R4 1608 aa11.36□□□□□ -0.59
RPGR-202ENST00000339363 U2SURPO15042 1029 aaKnown RBP11.36□□□□□ -0.59
RPGR-202ENST00000339363 MCM5P33992 734 aa11.36□□□□□ -0.59
RPGR-202ENST00000339363 PRIM1P49642 420 aaKnown RBP11.36□□□□□ -0.59
RPGR-202ENST00000339363 KLHL40Q2TBA0 621 aa11.36□□□□□ -0.59
RPGR-202ENST00000339363 MROH1Q8NDA8 1641 aa11.36□□□□□ -0.59
RPGR-202ENST00000339363 SYCE3A1L190 88 aa11.36□□□□□ -0.59
RPGR-202ENST00000339363 RBM27Q9P2N5 1060 aaKnown RBP11.36□□□□□ -0.59
RPGR-202ENST00000339363 ZSCAN23Q3MJ62 389 aa11.35□□□□□ -0.59
RPGR-202ENST00000339363 FOXD4L6Q3SYB3 417 aaPredicted RBP11.35□□□□□ -0.59
RPGR-202ENST00000339363 FOXD4L3Q6VB84 417 aaPredicted RBP11.35□□□□□ -0.59
RPGR-202ENST00000339363 TIGD1Q96MW7 591 aa11.35□□□□□ -0.59
RPGR-202ENST00000339363 ELL2O00472 640 aaPredicted RBP11.35□□□□□ -0.59
RPGR-202ENST00000339363 UHRF1BP1LA0JNW5 1464 aa11.35□□□□□ -0.59
RPGR-202ENST00000339363 AK9Q5TCS8 1911 aa11.35□□□□□ -0.59
RPGR-202ENST00000339363 PKP1Q13835 747 aa11.34□□□□□ -0.59
RPGR-202ENST00000339363 ZBTB9Q96C00 473 aa11.34□□□□□ -0.59
RPGR-202ENST00000339363 PRIMPOLQ96LW4 560 aa11.34□□□□□ -0.59
RPGR-202ENST00000339363 DIAPH3Q9NSV4 1193 aa11.34□□□□□ -0.59
RPGR-202ENST00000339363 DHX37Q8IY37 1157 aaKnown RBP11.34□□□□□ -0.59
RPGR-202ENST00000339363 TSPYL6Q8N831 410 aa11.34□□□□□ -0.59
RPGR-202ENST00000339363 DIP2BQ9P265 1576 aa11.34□□□□□ -0.59
RPGR-202ENST00000339363 BAG4O95429 457 aaKnown RBP11.34□□□□□ -0.59
RPGR-202ENST00000339363 SIRT2Q8IXJ6 389 aa11.34□□□□□ -0.59
RPGR-202ENST00000339363 ZCCHC11Q5TAX3 1644 aaKnown RBP11.34□□□□□ -0.59
RPGR-202ENST00000339363 ZKSCAN2Q63HK3 967 aa11.33□□□□□ -0.59
RPGR-202ENST00000339363 STK26Q9P289 416 aa11.33□□□□□ -0.59
RPGR-202ENST00000339363 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.33□□□□□ -0.6
RPGR-202ENST00000339363 RAB3GAP1Q15042 981 aa11.33□□□□□ -0.6
RPGR-202ENST00000339363 WDR63Q8IWG1 891 aa11.33□□□□□ -0.6
RPGR-202ENST00000339363 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
RPGR-202ENST00000339363 C17orf53Q8N3J3 647 aaPredicted RBP11.33□□□□□ -0.6
RPGR-202ENST00000339363 TMPOP42166 694 aaKnown RBP11.32□□□□□ -0.6
RPGR-202ENST00000339363 CYB5RLQ6IPT4 315 aa11.32□□□□□ -0.6
RPGR-202ENST00000339363 BCL2L12Q9HB09 334 aa11.32□□□□□ -0.6
RPGR-202ENST00000339363 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.32□□□□□ -0.6
RPGR-202ENST00000339363 NOLC1Q14978 699 aaKnown RBP eCLIP11.31□□□□□ -0.6
RPGR-202ENST00000339363 DEPDC5O75140 1603 aa11.31□□□□□ -0.6
RPGR-202ENST00000339363 K7ELQ4 463 aaPredicted RBP11.31□□□□□ -0.6
RPGR-202ENST00000339363 IRX5P78411 483 aaPredicted RBP11.31□□□□□ -0.6
RPGR-202ENST00000339363 ATF7IPQ6VMQ6 1270 aa11.31□□□□□ -0.6
RPGR-202ENST00000339363 SMC5Q8IY18 1101 aa11.31□□□□□ -0.6
RPGR-202ENST00000339363 GAS2L2Q8NHY3 880 aa11.31□□□□□ -0.6
RPGR-202ENST00000339363 PHACTR3Q96KR7 559 aa11.31□□□□□ -0.6
RPGR-202ENST00000339363 ADGRB1O14514 1584 aa11.31□□□□□ -0.6
RPGR-202ENST00000339363 PPRC1Q5VV67 1664 aaKnown RBP11.31□□□□□ -0.6
RPGR-202ENST00000339363 GGT6Q6P531 493 aa11.31□□□□□ -0.6
RPGR-202ENST00000339363 VWDEQ8N2E2 1590 aa11.3□□□□□ -0.6
RPGR-202ENST00000339363 TULP4Q9NRJ4 1543 aa11.3□□□□□ -0.6
RPGR-202ENST00000339363 C16orf71Q8IYS4 520 aaPredicted RBP11.3□□□□□ -0.6
RPGR-202ENST00000339363 TTC12Q9H892 705 aaPredicted RBP11.3□□□□□ -0.6
RPGR-202ENST00000339363 OTUD7AQ8TE49 926 aaPredicted RBP11.3□□□□□ -0.6
RPGR-202ENST00000339363 SECISBP2LQ93073 1101 aaKnown RBP11.3□□□□□ -0.6
RPGR-202ENST00000339363 TET3O43151 1660 aa11.3□□□□□ -0.6
RPGR-202ENST00000339363 NUCB2P80303 420 aa11.3□□□□□ -0.6
RPGR-202ENST00000339363 NCOA3Q9Y6Q9 1424 aa11.3□□□□□ -0.6
RPGR-202ENST00000339363 QRICH2Q9H0J4 1663 aa11.3□□□□□ -0.6
RPGR-202ENST00000339363 ZNF592Q92610 1267 aa11.29□□□□□ -0.6
RPGR-202ENST00000339363 C14orf93Q9H972 538 aaKnown RBP11.29□□□□□ -0.6
RPGR-202ENST00000339363 CALCOCO1Q9P1Z2 691 aa11.29□□□□□ -0.6
RPGR-202ENST00000339363 IFT172Q9UG01 1749 aa11.29□□□□□ -0.6
RPGR-202ENST00000339363 SYAP1Q96A49 352 aaPredicted RBP11.29□□□□□ -0.6
RPGR-202ENST00000339363 A0A1W2PP64 1363 aa11.29□□□□□ -0.6
RPGR-202ENST00000339363 NRXN1Q9ULB1 1477 aa11.29□□□□□ -0.6
RPGR-202ENST00000339363 PPIP5K1Q6PFW1 1433 aa11.29□□□□□ -0.6
RPGR-202ENST00000339363 HDAC1Q13547 482 aaPredicted RBP11.29□□□□□ -0.6
RPGR-202ENST00000339363 NUCB1Q02818 461 aa11.28□□□□□ -0.6
RPGR-202ENST00000339363 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
RPGR-202ENST00000339363 DRC7Q8IY82 874 aa11.28□□□□□ -0.6
RPGR-202ENST00000339363 ATP7AQ04656 1500 aa11.28□□□□□ -0.6
RPGR-202ENST00000339363 TSPY26PQ9H489 355 aa11.28□□□□□ -0.6
RPGR-202ENST00000339363 NINLQ9Y2I6 1382 aa11.28□□□□□ -0.6
RPGR-202ENST00000339363 FYB1O15117 783 aa11.28□□□□□ -0.6
RPGR-202ENST00000339363 HMOX1P09601 288 aa11.28□□□□□ -0.6
RPGR-202ENST00000339363 MYOM2P54296 1465 aa11.27□□□□□ -0.6
RPGR-202ENST00000339363 KRT24Q2M2I5 525 aa11.27□□□□□ -0.6
RPGR-202ENST00000339363 ANKRD45Q5TZF3 282 aa11.27□□□□□ -0.6
RPGR-202ENST00000339363 TBC1D9Q6ZT07 1266 aa11.27□□□□□ -0.6
RPGR-202ENST00000339363 ZRANB1Q9UGI0 708 aa11.27□□□□□ -0.6
RPGR-202ENST00000339363 GSPT1P15170 499 aaKnown RBP11.27□□□□□ -0.61
RPGR-202ENST00000339363 NPATQ14207 1427 aa11.27□□□□□ -0.61
RPGR-202ENST00000339363 ZC3H13Q5T200 1668 aaKnown RBP11.27□□□□□ -0.61
RPGR-202ENST00000339363 FAM83GA6ND36 823 aa11.27□□□□□ -0.61
RPGR-202ENST00000339363 RBM25P49756 843 aaKnown RBP11.27□□□□□ -0.61
RPGR-202ENST00000339363 CHD1LQ86WJ1 897 aa11.27□□□□□ -0.61
RPGR-202ENST00000339363 USP25Q9UHP3 1055 aa11.27□□□□□ -0.61
RPGR-202ENST00000339363 ADGRB2O60241 1585 aa11.26□□□□□ -0.61
RPGR-202ENST00000339363 ZNF445P59923 1031 aa11.26□□□□□ -0.61
RPGR-202ENST00000339363 ZNF710Q8N1W2 664 aa11.26□□□□□ -0.61
RPGR-202ENST00000339363 OGFRQ9NZT2 677 aa11.26□□□□□ -0.61
RPGR-202ENST00000339363 MINK1Q8N4C8 1332 aaPredicted RBP11.26□□□□□ -0.61
RPGR-202ENST00000339363 KIAA1210Q9ULL0 1709 aa11.26□□□□□ -0.61
RPGR-202ENST00000339363 KANK1Q14678 1352 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms