RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 SBNO2Q9Y2G9 1366 aa27.48■■□□□ 1.99
ITGA4-202ENST00000339307 WDR17Q8IZU2 1322 aa27.47■■□□□ 1.99
ITGA4-202ENST00000339307 SLC12A5Q9H2X9 1139 aa27.47■■□□□ 1.99
ITGA4-202ENST00000339307 NME9Q86XW9 330 aa27.45■■□□□ 1.98
ITGA4-202ENST00000339307 PARP4Q9UKK3 1724 aaKnown RBP27.45■■□□□ 1.98
ITGA4-202ENST00000339307 COL18A1P39060 1754 aa27.44■■□□□ 1.98
ITGA4-202ENST00000339307 RGPD5Q99666 1765 aa27.42■■□□□ 1.98
ITGA4-202ENST00000339307 C11orf95C9JLR9 678 aaPredicted RBP27.42■■□□□ 1.98
ITGA4-202ENST00000339307 TERF2IPQ9NYB0 399 aa27.42■■□□□ 1.98
ITGA4-202ENST00000339307 MON2Q7Z3U7 1717 aa27.42■■□□□ 1.98
ITGA4-202ENST00000339307 PARD3Q8TEW0 1356 aa27.41■■□□□ 1.98
ITGA4-202ENST00000339307 OVOS2A0A0G2JMS6 1433 aa27.41■■□□□ 1.98
ITGA4-202ENST00000339307 OVOS2A0A0J9YW53 1432 aa27.41■■□□□ 1.98
ITGA4-202ENST00000339307 OVOS2Q6IE36 1432 aa27.41■■□□□ 1.98
ITGA4-202ENST00000339307 NBPF14Q5TI25 921 aa27.41■■□□□ 1.98
ITGA4-202ENST00000339307 CARD10Q9BWT7 1032 aa27.41■■□□□ 1.98
ITGA4-202ENST00000339307 ST20-MTHFSA0A0A6YYL1 179 aa27.4■■□□□ 1.98
ITGA4-202ENST00000339307 CDCA7Q9BWT1 371 aaPredicted RBP27.4■■□□□ 1.98
ITGA4-202ENST00000339307 LRRC37A3O60309 1634 aa27.38■■□□□ 1.97
ITGA4-202ENST00000339307 NFAT5O94916 1531 aa27.38■■□□□ 1.97
ITGA4-202ENST00000339307 CD163L1Q9NR16 1453 aa27.38■■□□□ 1.97
ITGA4-202ENST00000339307 LRP5O75197 1615 aa27.37■■□□□ 1.97
ITGA4-202ENST00000339307 USP31Q70CQ4 1352 aa27.36■■□□□ 1.97
ITGA4-202ENST00000339307 EXOC5O00471 708 aa27.36■■□□□ 1.97
ITGA4-202ENST00000339307 NLRP2Q9NX02 1062 aa27.35■■□□□ 1.97
ITGA4-202ENST00000339307 A0A1W2PP64 1363 aa27.35■■□□□ 1.97
ITGA4-202ENST00000339307 MARCH10Q8NA82 808 aaPredicted RBP27.34■■□□□ 1.97
ITGA4-202ENST00000339307 EDC4Q6P2E9 1401 aaKnown RBP27.34■■□□□ 1.97
ITGA4-202ENST00000339307 PUS7Q96PZ0 661 aaKnown RBP27.33■■□□□ 1.96
ITGA4-202ENST00000339307 CCDC7Q96M83 1385 aa27.32■■□□□ 1.96
ITGA4-202ENST00000339307 WNK3Q9BYP7 1800 aa27.31■■□□□ 1.96
ITGA4-202ENST00000339307 TESK2Q96S53 571 aa27.31■■□□□ 1.96
ITGA4-202ENST00000339307 BCL11BQ9C0K0 894 aaPredicted RBP27.31■■□□□ 1.96
ITGA4-202ENST00000339307 PEAK1Q9H792 1746 aa27.3■■□□□ 1.96
ITGA4-202ENST00000339307 SLC24A1O60721 1099 aa27.3■■□□□ 1.96
ITGA4-202ENST00000339307 PTF1AQ7RTS3 328 aa27.3■■□□□ 1.96
ITGA4-202ENST00000339307 RREB1Q92766 1687 aa27.3■■□□□ 1.96
ITGA4-202ENST00000339307 ANKRD24Q8TF21 1146 aa27.29■■□□□ 1.96
ITGA4-202ENST00000339307 NUP188Q5SRE5 1749 aa27.29■■□□□ 1.96
ITGA4-202ENST00000339307 LTN1O94822 1766 aa27.28■■□□□ 1.96
ITGA4-202ENST00000339307 ERBB3P21860 1342 aa27.28■■□□□ 1.96
ITGA4-202ENST00000339307 ABCC6O95255 1503 aa27.27■■□□□ 1.96
ITGA4-202ENST00000339307 SBF2Q86WG5 1849 aa27.27■■□□□ 1.96
ITGA4-202ENST00000339307 PLSCR1O15162 318 aa27.26■■□□□ 1.95
ITGA4-202ENST00000339307 LTV1Q96GA3 475 aaPredicted RBP27.26■■□□□ 1.95
ITGA4-202ENST00000339307 COG3Q96JB2 828 aa27.25■■□□□ 1.95
ITGA4-202ENST00000339307 NINLQ9Y2I6 1382 aa27.25■■□□□ 1.95
ITGA4-202ENST00000339307 USP54Q70EL1 1684 aa27.24■■□□□ 1.95
ITGA4-202ENST00000339307 IL2RBP14784 551 aa27.24■■□□□ 1.95
ITGA4-202ENST00000339307 TMF1P82094 1093 aa27.24■■□□□ 1.95
ITGA4-202ENST00000339307 USP47Q96K76 1375 aa27.21■■□□□ 1.95
ITGA4-202ENST00000339307 ACSBG1Q96GR2 724 aa27.21■■□□□ 1.95
ITGA4-202ENST00000339307 TNS2Q63HR2 1409 aa27.2■■□□□ 1.95
ITGA4-202ENST00000339307 IP6K1Q92551 441 aa27.2■■□□□ 1.94
ITGA4-202ENST00000339307 PCGF6Q9BYE7 350 aa27.2■■□□□ 1.94
ITGA4-202ENST00000339307 AMPHP49418 695 aa27.19■■□□□ 1.94
ITGA4-202ENST00000339307 KCNQ2O43526 872 aa27.18■■□□□ 1.94
ITGA4-202ENST00000339307 FBLN1P23142 703 aa27.18■■□□□ 1.94
ITGA4-202ENST00000339307 PPP1R1BQ9UD71 204 aaPredicted RBP27.18■■□□□ 1.94
ITGA4-202ENST00000339307 BCL9O00512 1426 aa27.18■■□□□ 1.94
ITGA4-202ENST00000339307 SPON1Q9HCB6 807 aa27.16■■□□□ 1.94
ITGA4-202ENST00000339307 ANKRD36BQ8N2N9 1353 aa27.16■■□□□ 1.94
ITGA4-202ENST00000339307 PROM2Q8N271 834 aa27.16■■□□□ 1.94
ITGA4-202ENST00000339307 RGPD3A6NKT7 1758 aaPredicted RBP27.15■■□□□ 1.94
ITGA4-202ENST00000339307 RGPD4Q7Z3J3 1758 aa27.15■■□□□ 1.94
ITGA4-202ENST00000339307 TXNRD1Q16881 649 aa27.15■■□□□ 1.94
ITGA4-202ENST00000339307 ANO8Q9HCE9 1232 aaPredicted RBP27.15■■□□□ 1.94
ITGA4-202ENST00000339307 MAP3K19Q56UN5 1328 aa27.14■■□□□ 1.93
ITGA4-202ENST00000339307 DDX54Q8TDD1 881 aaKnown RBP27.14■■□□□ 1.93
ITGA4-202ENST00000339307 GGNBP2Q9H3C7 697 aa27.14■■□□□ 1.93
ITGA4-202ENST00000339307 CDCA8Q53HL2 280 aa27.13■■□□□ 1.93
ITGA4-202ENST00000339307 HOXC9P31274 260 aa27.12■■□□□ 1.93
ITGA4-202ENST00000339307 STK32BQ9NY57 414 aa27.12■■□□□ 1.93
ITGA4-202ENST00000339307 RRS1Q15050 365 aaKnown RBP27.1■■□□□ 1.93
ITGA4-202ENST00000339307 KAT6BQ8WYB5 2073 aa27.1■■□□□ 1.93
ITGA4-202ENST00000339307 FYB1O15117 783 aa27.09■■□□□ 1.93
ITGA4-202ENST00000339307 PDGFDQ9GZP0 370 aaPredicted RBP27.07■■□□□ 1.92
ITGA4-202ENST00000339307 NHSQ6T4R5 1651 aa27.06■■□□□ 1.92
ITGA4-202ENST00000339307 ZBTB7AO95365 584 aa27.06■■□□□ 1.92
ITGA4-202ENST00000339307 SLC15A2Q16348 729 aa27.05■■□□□ 1.92
ITGA4-202ENST00000339307 SYTL4Q96C24 671 aaPredicted RBP27.05■■□□□ 1.92
ITGA4-202ENST00000339307 POLR3GLQ9BT43 218 aa27.04■■□□□ 1.92
ITGA4-202ENST00000339307 TIMELESSQ9UNS1 1208 aa27.04■■□□□ 1.92
ITGA4-202ENST00000339307 FAM208AQ9UK61 1670 aaKnown RBP27.04■■□□□ 1.92
ITGA4-202ENST00000339307 ATF5Q9Y2D1 282 aaPredicted RBP27.02■■□□□ 1.92
ITGA4-202ENST00000339307 USHBP1Q8N6Y0 703 aa27.01■■□□□ 1.91
ITGA4-202ENST00000339307 ZCRB1Q8TBF4 217 aaKnown RBP27■■□□□ 1.91
ITGA4-202ENST00000339307 RTL1A6NKG5 1358 aa27■■□□□ 1.91
ITGA4-202ENST00000339307 SMG6Q86US8 1419 aaKnown RBP26.99■■□□□ 1.91
ITGA4-202ENST00000339307 DCAF8L1A6NGE4 600 aa26.99■■□□□ 1.91
ITGA4-202ENST00000339307 RGPD2P0DJD1 1756 aa26.99■■□□□ 1.91
ITGA4-202ENST00000339307 NBPF6Q5VWK0 638 aa26.99■■□□□ 1.91
ITGA4-202ENST00000339307 NBPF4Q96M43 638 aa26.99■■□□□ 1.91
ITGA4-202ENST00000339307 BTAF1O14981 1849 aa26.99■■□□□ 1.91
ITGA4-202ENST00000339307 PRIM1P49642 420 aaKnown RBP26.97■■□□□ 1.91
ITGA4-202ENST00000339307 RAPGEF4Q8WZA2 1011 aa26.97■■□□□ 1.91
ITGA4-202ENST00000339307 CARD14Q9BXL6 1004 aa26.97■■□□□ 1.91
ITGA4-202ENST00000339307 KIF20BQ96Q89 1820 aa26.97■■□□□ 1.91
ITGA4-202ENST00000339307 CLSPNQ9HAW4 1339 aa26.97■■□□□ 1.91
ITGA4-202ENST00000339307 CASZ1Q86V15 1759 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms