RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 IL16Q14005 1332 aa20.58■□□□□ 0.88
TRIM9-202ENST00000338969 ZBTB7BO15156 539 aaPredicted RBP20.57■□□□□ 0.88
TRIM9-202ENST00000338969 NECTIN2Q92692 538 aa20.57■□□□□ 0.88
TRIM9-202ENST00000338969 CCDC61Q9Y6R9 512 aa20.57■□□□□ 0.88
TRIM9-202ENST00000338969 MYO5BQ9ULV0 1848 aa20.57■□□□□ 0.88
TRIM9-202ENST00000338969 TRAK2O60296 914 aa20.57■□□□□ 0.88
TRIM9-202ENST00000338969 SLC4A10Q6U841 1118 aa20.57■□□□□ 0.88
TRIM9-202ENST00000338969 CD163L1Q9NR16 1453 aa20.57■□□□□ 0.88
TRIM9-202ENST00000338969 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
TRIM9-202ENST00000338969 SMARCA5O60264 1052 aaPredicted RBP20.56■□□□□ 0.88
TRIM9-202ENST00000338969 ALDH1L2Q3SY69 923 aa20.56■□□□□ 0.88
TRIM9-202ENST00000338969 ZMYM3Q14202 1370 aa20.56■□□□□ 0.88
TRIM9-202ENST00000338969 GOLGA6L3A6NEY3 463 aa20.55■□□□□ 0.88
TRIM9-202ENST00000338969 CD2BP2O95400 341 aaKnown RBP20.55■□□□□ 0.88
TRIM9-202ENST00000338969 IL13P35225 146 aa20.55■□□□□ 0.88
TRIM9-202ENST00000338969 SIRT2Q8IXJ6 389 aa20.55■□□□□ 0.88
TRIM9-202ENST00000338969 TBC1D9Q6ZT07 1266 aa20.55■□□□□ 0.88
TRIM9-202ENST00000338969 OTUD7AQ8TE49 926 aaPredicted RBP20.54■□□□□ 0.88
TRIM9-202ENST00000338969 LTV1Q96GA3 475 aaPredicted RBP20.54■□□□□ 0.88
TRIM9-202ENST00000338969 ARHGAP31Q2M1Z3 1444 aa20.54■□□□□ 0.88
TRIM9-202ENST00000338969 COL3A1P02461 1466 aaPredicted RBP20.54■□□□□ 0.88
TRIM9-202ENST00000338969 PPIP5K1Q6PFW1 1433 aa20.53■□□□□ 0.88
TRIM9-202ENST00000338969 HDGFP51858 240 aaKnown RBP20.52■□□□□ 0.88
TRIM9-202ENST00000338969 LRRC7Q96NW7 1537 aa20.52■□□□□ 0.88
TRIM9-202ENST00000338969 CALD1Q05682 793 aaKnown RBP20.52■□□□□ 0.87
TRIM9-202ENST00000338969 NGDNQ8NEJ9 315 aaKnown RBP20.52■□□□□ 0.87
TRIM9-202ENST00000338969 HSP90AB2PQ58FF8 381 aa20.51■□□□□ 0.87
TRIM9-202ENST00000338969 LTKP29376 864 aa20.5■□□□□ 0.87
TRIM9-202ENST00000338969 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.5■□□□□ 0.87
TRIM9-202ENST00000338969 IFT57Q9NWB7 429 aa20.5■□□□□ 0.87
TRIM9-202ENST00000338969 XRCC6P12956 609 aaKnown RBP eCLIP20.5■□□□□ 0.87
TRIM9-202ENST00000338969 FOXO3O43524 673 aa20.5■□□□□ 0.87
TRIM9-202ENST00000338969 L1TD1Q5T7N2 865 aaKnown RBP20.5■□□□□ 0.87
TRIM9-202ENST00000338969 ALKQ9UM73 1620 aa20.49■□□□□ 0.87
TRIM9-202ENST00000338969 F6X3S4 739 aa20.49■□□□□ 0.87
TRIM9-202ENST00000338969 ADGRB2O60241 1585 aa20.48■□□□□ 0.87
TRIM9-202ENST00000338969 FOXD4L5Q5VV16 416 aaPredicted RBP20.48■□□□□ 0.87
TRIM9-202ENST00000338969 FOXD4L4Q8WXT5 416 aaPredicted RBP20.48■□□□□ 0.87
TRIM9-202ENST00000338969 TNPO1Q92973 898 aaKnown RBP20.48■□□□□ 0.87
TRIM9-202ENST00000338969 CFAP44Q96MT7 982 aa20.48■□□□□ 0.87
TRIM9-202ENST00000338969 RICTORQ6R327 1708 aa20.48■□□□□ 0.87
TRIM9-202ENST00000338969 NCLP19338 710 aaKnown RBP20.48■□□□□ 0.87
TRIM9-202ENST00000338969 API5Q9BZZ5 524 aaKnown RBP20.48■□□□□ 0.87
TRIM9-202ENST00000338969 PNPLA6Q8IY17 1366 aa20.47■□□□□ 0.87
TRIM9-202ENST00000338969 TSHZ3Q63HK5 1081 aa20.47■□□□□ 0.87
TRIM9-202ENST00000338969 BMP2KLQ5H9B9 411 aa20.47■□□□□ 0.87
TRIM9-202ENST00000338969 GCC1Q96CN9 775 aa20.47■□□□□ 0.87
TRIM9-202ENST00000338969 ACEP12821 1306 aa20.47■□□□□ 0.87
TRIM9-202ENST00000338969 FAM135BQ49AJ0 1406 aa20.47■□□□□ 0.87
TRIM9-202ENST00000338969 EIF4A2Q14240 407 aaKnown RBP20.47■□□□□ 0.87
TRIM9-202ENST00000338969 A2ML1A8K2U0 1454 aa20.46■□□□□ 0.87
TRIM9-202ENST00000338969 PRR36Q9H6K5 1346 aa20.46■□□□□ 0.87
TRIM9-202ENST00000338969 ARHGEF40Q8TER5 1519 aa20.46■□□□□ 0.87
TRIM9-202ENST00000338969 RRAGDQ9NQL2 400 aaPredicted RBP20.46■□□□□ 0.87
TRIM9-202ENST00000338969 LMOD3Q0VAK6 560 aa20.45■□□□□ 0.86
TRIM9-202ENST00000338969 NOL8Q76FK4 1167 aaKnown RBP20.45■□□□□ 0.86
TRIM9-202ENST00000338969 USP32Q8NFA0 1604 aa20.45■□□□□ 0.86
TRIM9-202ENST00000338969 MEIS3Q99687 375 aa20.45■□□□□ 0.86
TRIM9-202ENST00000338969 EID1Q9Y6B2 187 aa20.45■□□□□ 0.86
TRIM9-202ENST00000338969 TMEM131LA2VDJ0 1609 aa20.45■□□□□ 0.86
TRIM9-202ENST00000338969 PREX1Q8TCU6 1659 aa20.45■□□□□ 0.86
TRIM9-202ENST00000338969 SSFA2P28290 1259 aa20.45■□□□□ 0.86
TRIM9-202ENST00000338969 SLC4A2P04920 1241 aa20.44■□□□□ 0.86
TRIM9-202ENST00000338969 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
TRIM9-202ENST00000338969 ZFYVE9O95405 1425 aa20.44■□□□□ 0.86
TRIM9-202ENST00000338969 GSPT1P15170 499 aaKnown RBP20.44■□□□□ 0.86
TRIM9-202ENST00000338969 TPRNQ4KMQ1 711 aa20.44■□□□□ 0.86
TRIM9-202ENST00000338969 GAS2L2Q8NHY3 880 aa20.43■□□□□ 0.86
TRIM9-202ENST00000338969 CDC45O75419 566 aa20.43■□□□□ 0.86
TRIM9-202ENST00000338969 AMOTL2Q9Y2J4 779 aa20.43■□□□□ 0.86
TRIM9-202ENST00000338969 AMPHP49418 695 aa20.42■□□□□ 0.86
TRIM9-202ENST00000338969 LMOD2Q6P5Q4 547 aa20.42■□□□□ 0.86
TRIM9-202ENST00000338969 CHMP4BQ9H444 224 aaKnown RBP20.42■□□□□ 0.86
TRIM9-202ENST00000338969 TNRQ92752 1358 aa20.42■□□□□ 0.86
TRIM9-202ENST00000338969 VIRMAQ69YN4 1812 aaKnown RBP20.41■□□□□ 0.86
TRIM9-202ENST00000338969 RBM25P49756 843 aaKnown RBP20.41■□□□□ 0.86
TRIM9-202ENST00000338969 CLTCQ00610 1675 aaKnown RBP20.41■□□□□ 0.86
TRIM9-202ENST00000338969 G2E3Q7L622 706 aa20.41■□□□□ 0.86
TRIM9-202ENST00000338969 PLEKHM2Q8IWE5 1019 aa20.41■□□□□ 0.86
TRIM9-202ENST00000338969 ZNF853P0CG23 659 aa20.4■□□□□ 0.86
TRIM9-202ENST00000338969 KIF2CQ99661 725 aa20.4■□□□□ 0.86
TRIM9-202ENST00000338969 ROBO2Q9HCK4 1378 aa20.4■□□□□ 0.86
TRIM9-202ENST00000338969 ABCC4O15439 1325 aa20.4■□□□□ 0.86
TRIM9-202ENST00000338969 RIMBP3CA6NJZ7 1639 aa20.4■□□□□ 0.86
TRIM9-202ENST00000338969 RIMBP3BA6NNM3 1639 aa20.4■□□□□ 0.86
TRIM9-202ENST00000338969 RIMBP3Q9UFD9 1639 aa20.4■□□□□ 0.86
TRIM9-202ENST00000338969 DDX11L8A8MPP1 907 aa20.39■□□□□ 0.86
TRIM9-202ENST00000338969 K7ELQ4 463 aaPredicted RBP20.39■□□□□ 0.86
TRIM9-202ENST00000338969 RTF1Q92541 710 aaKnown RBP20.39■□□□□ 0.86
TRIM9-202ENST00000338969 ZNF692Q9BU19 519 aaPredicted RBP20.39■□□□□ 0.86
TRIM9-202ENST00000338969 TSPYL4Q9UJ04 414 aa20.39■□□□□ 0.86
TRIM9-202ENST00000338969 CHAMP1Q96JM3 812 aa20.39■□□□□ 0.85
TRIM9-202ENST00000338969 NLRP6P59044 892 aa20.38■□□□□ 0.85
TRIM9-202ENST00000338969 GBP4Q96PP9 640 aa20.38■□□□□ 0.85
TRIM9-202ENST00000338969 EXOC6BQ9Y2D4 811 aa20.38■□□□□ 0.85
TRIM9-202ENST00000338969 FAM43AQ8N2R8 423 aa20.38■□□□□ 0.85
TRIM9-202ENST00000338969 ARHGAP45Q92619 1136 aa20.38■□□□□ 0.85
TRIM9-202ENST00000338969 ZNF428Q96B54 188 aa20.38■□□□□ 0.85
TRIM9-202ENST00000338969 TTC21BQ7Z4L5 1316 aa20.38■□□□□ 0.85
TRIM9-202ENST00000338969 FOXD4L6Q3SYB3 417 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms