RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 GCC1Q96CN9 775 aa17.26■□□□□ 0.35
PARVB-201ENST00000338758 CNTROBQ8N137 903 aa17.26■□□□□ 0.35
PARVB-201ENST00000338758 TAF7Q15545 349 aaPredicted RBP17.25■□□□□ 0.35
PARVB-201ENST00000338758 ATP6V1DQ9Y5K8 247 aa17.25■□□□□ 0.35
PARVB-201ENST00000338758 RALYLQ86SE5 291 aaKnown RBP17.25■□□□□ 0.35
PARVB-201ENST00000338758 DHX16O60231 1041 aaKnown RBP17.25■□□□□ 0.35
PARVB-201ENST00000338758 SRGAP3O43295 1099 aa17.24■□□□□ 0.35
PARVB-201ENST00000338758 MSNP26038 577 aaKnown RBP17.24■□□□□ 0.35
PARVB-201ENST00000338758 NFXL1Q6ZNB6 911 aa17.24■□□□□ 0.35
PARVB-201ENST00000338758 ZMYM3Q14202 1370 aa17.24■□□□□ 0.35
PARVB-201ENST00000338758 TCOF1Q13428 1488 aaKnown RBP17.24■□□□□ 0.35
PARVB-201ENST00000338758 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
PARVB-201ENST00000338758 SSH1Q8WYL5 1049 aa17.23■□□□□ 0.35
PARVB-201ENST00000338758 TMOD3Q9NYL9 352 aa17.23■□□□□ 0.35
PARVB-201ENST00000338758 DDX49Q9Y6V7 483 aaKnown RBP17.23■□□□□ 0.35
PARVB-201ENST00000338758 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
PARVB-201ENST00000338758 TMEM57Q8N5G2 664 aa17.22■□□□□ 0.35
PARVB-201ENST00000338758 PPP1R1BQ9UD71 204 aaPredicted RBP17.22■□□□□ 0.35
PARVB-201ENST00000338758 STARD3NLO95772 234 aa17.22■□□□□ 0.35
PARVB-201ENST00000338758 HSP90AB2PQ58FF8 381 aa17.22■□□□□ 0.35
PARVB-201ENST00000338758 NAP1L5Q96NT1 182 aaPredicted RBP17.22■□□□□ 0.35
PARVB-201ENST00000338758 CCDC85AQ96PX6 553 aaPredicted RBP17.22■□□□□ 0.35
PARVB-201ENST00000338758 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
PARVB-201ENST00000338758 CCDC57Q2TAC2 916 aa17.22■□□□□ 0.35
PARVB-201ENST00000338758 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
PARVB-201ENST00000338758 ERICH2A1L162 156 aa17.21■□□□□ 0.35
PARVB-201ENST00000338758 TRIM29Q14134 588 aa17.21■□□□□ 0.35
PARVB-201ENST00000338758 CREBRFQ8IUR6 639 aa17.21■□□□□ 0.35
PARVB-201ENST00000338758 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.35
PARVB-201ENST00000338758 MPHOSPH8Q99549 860 aa17.21■□□□□ 0.35
PARVB-201ENST00000338758 LRRCC1Q9C099 1032 aa17.21■□□□□ 0.35
PARVB-201ENST00000338758 BICDL1Q6ZP65 573 aa17.2■□□□□ 0.34
PARVB-201ENST00000338758 NINLQ9Y2I6 1382 aa17.2■□□□□ 0.34
PARVB-201ENST00000338758 PRAG1Q86YV5 1406 aa17.2■□□□□ 0.34
PARVB-201ENST00000338758 GOLGA6L3A6NEY3 463 aa17.2■□□□□ 0.34
PARVB-201ENST00000338758 MSH6P52701 1360 aa17.2■□□□□ 0.34
PARVB-201ENST00000338758 NSD2O96028 1365 aa17.2■□□□□ 0.34
PARVB-201ENST00000338758 VPS37CA5D8V6 355 aaPredicted RBP17.2■□□□□ 0.34
PARVB-201ENST00000338758 CEP170Q5SW79 1584 aa17.2■□□□□ 0.34
PARVB-201ENST00000338758 ABCC11Q96J66 1382 aa17.19■□□□□ 0.34
PARVB-201ENST00000338758 IL1RAPL2Q9NP60 686 aa17.19■□□□□ 0.34
PARVB-201ENST00000338758 ABCA5Q8WWZ7 1642 aa17.19■□□□□ 0.34
PARVB-201ENST00000338758 DDX11L8A8MPP1 907 aa17.19■□□□□ 0.34
PARVB-201ENST00000338758 RARSP54136 660 aaKnown RBP17.19■□□□□ 0.34
PARVB-201ENST00000338758 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
PARVB-201ENST00000338758 KCNA6P17658 529 aa17.19■□□□□ 0.34
PARVB-201ENST00000338758 TPM4P67936 248 aa17.19■□□□□ 0.34
PARVB-201ENST00000338758 CCDC158Q5M9N0 1113 aa17.19■□□□□ 0.34
PARVB-201ENST00000338758 SMC3Q9UQE7 1217 aa17.19■□□□□ 0.34
PARVB-201ENST00000338758 EXOC5O00471 708 aa17.18■□□□□ 0.34
PARVB-201ENST00000338758 ANKRD24Q8TF21 1146 aa17.18■□□□□ 0.34
PARVB-201ENST00000338758 CHAF1AQ13111 956 aaPredicted RBP17.18■□□□□ 0.34
PARVB-201ENST00000338758 FANCIQ9NVI1 1328 aa17.18■□□□□ 0.34
PARVB-201ENST00000338758 SAMD1Q6SPF0 538 aaPredicted RBP17.18■□□□□ 0.34
PARVB-201ENST00000338758 FAM83GA6ND36 823 aa17.17■□□□□ 0.34
PARVB-201ENST00000338758 CEP126Q9P2H0 1117 aa17.17■□□□□ 0.34
PARVB-201ENST00000338758 ZRANB1Q9UGI0 708 aa17.17■□□□□ 0.34
PARVB-201ENST00000338758 NPHP3Q7Z494 1330 aa17.17■□□□□ 0.34
PARVB-201ENST00000338758 RPAP2Q8IXW5 612 aaPredicted RBP17.16■□□□□ 0.34
PARVB-201ENST00000338758 TESK2Q96S53 571 aa17.16■□□□□ 0.34
PARVB-201ENST00000338758 F6X3S4 739 aa17.16■□□□□ 0.34
PARVB-201ENST00000338758 FOSBP53539 338 aa17.16■□□□□ 0.34
PARVB-201ENST00000338758 KIAA2012Q0VF49 1180 aa17.16■□□□□ 0.34
PARVB-201ENST00000338758 EXOC6BQ9Y2D4 811 aa17.16■□□□□ 0.34
PARVB-201ENST00000338758 CTDP1Q9Y5B0 961 aaPredicted RBP17.16■□□□□ 0.34
PARVB-201ENST00000338758 NCKAP5LQ9HCH0 1330 aa17.16■□□□□ 0.34
PARVB-201ENST00000338758 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
PARVB-201ENST00000338758 TTC39AQ5SRH9 613 aa17.16■□□□□ 0.34
PARVB-201ENST00000338758 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
PARVB-201ENST00000338758 RALGAPBQ86X10 1494 aa17.15■□□□□ 0.34
PARVB-201ENST00000338758 SHANK2Q9UPX8 1470 aa17.15■□□□□ 0.34
PARVB-201ENST00000338758 UBAP1LF5GYI3 381 aa17.15■□□□□ 0.34
PARVB-201ENST00000338758 PHF14O94880 888 aa17.15■□□□□ 0.34
PARVB-201ENST00000338758 MTMR7Q9Y216 660 aa17.15■□□□□ 0.34
PARVB-201ENST00000338758 AACSQ86V21 672 aa17.15■□□□□ 0.34
PARVB-201ENST00000338758 C19orf44Q9H6X5 657 aa17.15■□□□□ 0.34
PARVB-201ENST00000338758 NEK4P51957 841 aa17.14■□□□□ 0.34
PARVB-201ENST00000338758 LARP1Q6PKG0 1096 aaKnown RBP17.14■□□□□ 0.33
PARVB-201ENST00000338758 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
PARVB-201ENST00000338758 GNL3LQ9NVN8 582 aaKnown RBP17.14■□□□□ 0.33
PARVB-201ENST00000338758 TTC21AQ8NDW8 1320 aa17.14■□□□□ 0.33
PARVB-201ENST00000338758 PBRM1Q86U86 1689 aa17.14■□□□□ 0.33
PARVB-201ENST00000338758 PPIP5K1Q6PFW1 1433 aa17.14■□□□□ 0.33
PARVB-201ENST00000338758 CHD1LQ86WJ1 897 aa17.14■□□□□ 0.33
PARVB-201ENST00000338758 C20orf194Q5TEA3 1177 aa17.14■□□□□ 0.33
PARVB-201ENST00000338758 MAP4K4O95819 1239 aaPredicted RBP17.13■□□□□ 0.33
PARVB-201ENST00000338758 CABLES1Q8TDN4 633 aa17.13■□□□□ 0.33
PARVB-201ENST00000338758 TBX22Q9Y458 520 aa17.13■□□□□ 0.33
PARVB-201ENST00000338758 HIP1O00291 1037 aa17.13■□□□□ 0.33
PARVB-201ENST00000338758 ALDH1L2Q3SY69 923 aa17.13■□□□□ 0.33
PARVB-201ENST00000338758 TOM1O60784 492 aa17.12■□□□□ 0.33
PARVB-201ENST00000338758 PSMA5P28066 241 aa17.12■□□□□ 0.33
PARVB-201ENST00000338758 FKBP4Q02790 459 aaKnown RBP eCLIP17.12■□□□□ 0.33
PARVB-201ENST00000338758 FMNL2Q96PY5 1086 aa17.12■□□□□ 0.33
PARVB-201ENST00000338758 MYD88Q99836 296 aa17.12■□□□□ 0.33
PARVB-201ENST00000338758 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
PARVB-201ENST00000338758 GLIPR1L2Q4G1C9 344 aa17.11■□□□□ 0.33
PARVB-201ENST00000338758 RRP12Q5JTH9 1297 aaKnown RBP17.11■□□□□ 0.33
PARVB-201ENST00000338758 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
PARVB-201ENST00000338758 BICD2Q8TD16 824 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms