RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 TRPM2O94759 1503 aa14.36□□□□□ -0.11
UBE2D3-202ENST00000338145 FAM205CA6NFA0 338 aa14.36□□□□□ -0.11
UBE2D3-202ENST00000338145 VARS2Q5ST30 1063 aaKnown RBP14.36□□□□□ -0.11
UBE2D3-202ENST00000338145 C8orf37Q96NL8 207 aa14.36□□□□□ -0.11
UBE2D3-202ENST00000338145 SRCAPQ6ZRS2 3230 aa14.36□□□□□ -0.11
UBE2D3-202ENST00000338145 MYO5BQ9ULV0 1848 aa14.36□□□□□ -0.11
UBE2D3-202ENST00000338145 ASXL1Q8IXJ9 1541 aa14.36□□□□□ -0.11
UBE2D3-202ENST00000338145 OSBPP22059 807 aa14.35□□□□□ -0.11
UBE2D3-202ENST00000338145 HS3ST6Q96QI5 342 aa14.35□□□□□ -0.11
UBE2D3-202ENST00000338145 ATAD2Q6PL18 1390 aa14.34□□□□□ -0.11
UBE2D3-202ENST00000338145 EN1Q05925 392 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-202ENST00000338145 ZNF687Q8N1G0 1237 aa14.33□□□□□ -0.12
UBE2D3-202ENST00000338145 BCL2L12Q9HB09 334 aa14.33□□□□□ -0.12
UBE2D3-202ENST00000338145 MST1RQ04912 1400 aa14.32□□□□□ -0.12
UBE2D3-202ENST00000338145 PBX2P40425 430 aa14.32□□□□□ -0.12
UBE2D3-202ENST00000338145 NHSL1Q5SYE7 1610 aa14.32□□□□□ -0.12
UBE2D3-202ENST00000338145 PNPLA6Q8IY17 1366 aa14.32□□□□□ -0.12
UBE2D3-202ENST00000338145 PTPRUQ92729 1446 aa14.32□□□□□ -0.12
UBE2D3-202ENST00000338145 CCDC125Q86Z20 511 aa14.31□□□□□ -0.12
UBE2D3-202ENST00000338145 TRPC5Q9UL62 973 aaPredicted RBP14.3□□□□□ -0.12
UBE2D3-202ENST00000338145 POTEGQ6S5H5 508 aa14.28□□□□□ -0.12
UBE2D3-202ENST00000338145 ADAM33Q9BZ11 813 aa14.28□□□□□ -0.12
UBE2D3-202ENST00000338145 USP21Q9UK80 565 aa14.28□□□□□ -0.12
UBE2D3-202ENST00000338145 UNC13BO14795 1591 aa14.27□□□□□ -0.12
UBE2D3-202ENST00000338145 POTEMA6NI47 508 aa14.27□□□□□ -0.13
UBE2D3-202ENST00000338145 ADAMTS2O95450 1211 aa14.27□□□□□ -0.13
UBE2D3-202ENST00000338145 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.27□□□□□ -0.13
UBE2D3-202ENST00000338145 ADGRL3Q9HAR2 1447 aa14.26□□□□□ -0.13
UBE2D3-202ENST00000338145 LOC105371045A0A1W2PR82 267 aa14.26□□□□□ -0.13
UBE2D3-202ENST00000338145 POTEB3A0JP26 581 aa14.26□□□□□ -0.13
UBE2D3-202ENST00000338145 FAM50AQ14320 339 aaKnown RBP14.26□□□□□ -0.13
UBE2D3-202ENST00000338145 POTEBQ6S5H4 581 aa14.26□□□□□ -0.13
UBE2D3-202ENST00000338145 FNBP4Q8N3X1 1017 aaPredicted RBP14.26□□□□□ -0.13
UBE2D3-202ENST00000338145 XRN1Q8IZH2 1706 aaKnown RBP14.26□□□□□ -0.13
UBE2D3-202ENST00000338145 SETBP1Q9Y6X0 1596 aa14.26□□□□□ -0.13
UBE2D3-202ENST00000338145 PTCH1Q13635 1447 aa14.25□□□□□ -0.13
UBE2D3-202ENST00000338145 MAP3K7O43318 606 aa14.25□□□□□ -0.13
UBE2D3-202ENST00000338145 PTPREP23469 700 aa14.25□□□□□ -0.13
UBE2D3-202ENST00000338145 DDX17Q92841 729 aaKnown RBP14.25□□□□□ -0.13
UBE2D3-202ENST00000338145 E9PCH4 1651 aa14.24□□□□□ -0.13
UBE2D3-202ENST00000338145 SOS2Q07890 1332 aaPredicted RBP14.23□□□□□ -0.13
UBE2D3-202ENST00000338145 PRIM1P49642 420 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-202ENST00000338145 C6orf132Q5T0Z8 1188 aa14.23□□□□□ -0.13
UBE2D3-202ENST00000338145 METP08581 1390 aa14.22□□□□□ -0.13
UBE2D3-202ENST00000338145 ARHGAP33O14559 1287 aa14.22□□□□□ -0.13
UBE2D3-202ENST00000338145 ZNF326Q5BKZ1 582 aaKnown RBP14.22□□□□□ -0.13
UBE2D3-202ENST00000338145 C1orf167Q5SNV9 1468 aa14.22□□□□□ -0.13
UBE2D3-202ENST00000338145 LMOD2Q6P5Q4 547 aa14.21□□□□□ -0.13
UBE2D3-202ENST00000338145 LAMC1P11047 1609 aa14.21□□□□□ -0.13
UBE2D3-202ENST00000338145 IQGAP3Q86VI3 1631 aa14.21□□□□□ -0.13
UBE2D3-202ENST00000338145 NRXN3Q9Y4C0 1643 aa14.21□□□□□ -0.13
UBE2D3-202ENST00000338145 ATRNO75882 1429 aa14.21□□□□□ -0.13
UBE2D3-202ENST00000338145 ROCK1Q13464 1354 aa14.21□□□□□ -0.14
UBE2D3-202ENST00000338145 NUP155O75694 1391 aa14.2□□□□□ -0.14
UBE2D3-202ENST00000338145 PPP1R3GB7ZBB8 358 aa14.19□□□□□ -0.14
UBE2D3-202ENST00000338145 RBM26Q5T8P6 1007 aaKnown RBP14.18□□□□□ -0.14
UBE2D3-202ENST00000338145 PCDH10Q9P2E7 1040 aa14.18□□□□□ -0.14
UBE2D3-202ENST00000338145 ORAI2Q96SN7 254 aa14.17□□□□□ -0.14
UBE2D3-202ENST00000338145 EP400Q96L91 3159 aa14.16□□□□□ -0.14
UBE2D3-202ENST00000338145 NALCNQ8IZF0 1738 aa14.16□□□□□ -0.14
UBE2D3-202ENST00000338145 TSR1Q2NL82 804 aaKnown RBP14.16□□□□□ -0.14
UBE2D3-202ENST00000338145 POTEEQ6S8J3 1075 aa14.16□□□□□ -0.14
UBE2D3-202ENST00000338145 GPIHBP1Q8IV16 184 aa14.16□□□□□ -0.14
UBE2D3-202ENST00000338145 GJD4Q96KN9 370 aaPredicted RBP14.16□□□□□ -0.14
UBE2D3-202ENST00000338145 SLC4A5Q9BY07 1137 aa14.16□□□□□ -0.14
UBE2D3-202ENST00000338145 KCNK17Q96T54 332 aa14.15□□□□□ -0.14
UBE2D3-202ENST00000338145 RBM27Q9P2N5 1060 aaKnown RBP14.15□□□□□ -0.14
UBE2D3-202ENST00000338145 COL22A1Q8NFW1 1626 aaPredicted RBP14.15□□□□□ -0.14
UBE2D3-202ENST00000338145 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.15
UBE2D3-202ENST00000338145 BCL9LQ86UU0 1499 aa14.14□□□□□ -0.15
UBE2D3-202ENST00000338145 FCHSD2O94868 740 aa14.14□□□□□ -0.15
UBE2D3-202ENST00000338145 PTGDRQ13258 359 aa14.14□□□□□ -0.15
UBE2D3-202ENST00000338145 BLMP54132 1417 aaPredicted RBP14.14□□□□□ -0.15
UBE2D3-202ENST00000338145 NUTM2FA1L443 756 aa14.13□□□□□ -0.15
UBE2D3-202ENST00000338145 MYOM2P54296 1465 aa14.12□□□□□ -0.15
UBE2D3-202ENST00000338145 SF3B2Q13435 895 aaKnown RBP14.12□□□□□ -0.15
UBE2D3-202ENST00000338145 CDHR5Q9HBB8 845 aa14.12□□□□□ -0.15
UBE2D3-202ENST00000338145 HFM1A2PYH4 1435 aa14.12□□□□□ -0.15
UBE2D3-202ENST00000338145 PRAG1Q86YV5 1406 aa14.12□□□□□ -0.15
UBE2D3-202ENST00000338145 LRPPRCP42704 1394 aaKnown RBP14.11□□□□□ -0.15
UBE2D3-202ENST00000338145 TK2O00142 265 aa14.11□□□□□ -0.15
UBE2D3-202ENST00000338145 ONECUT3O60422 494 aaPredicted RBP14.11□□□□□ -0.15
UBE2D3-202ENST00000338145 SPHKAPQ2M3C7 1700 aa14.11□□□□□ -0.15
UBE2D3-202ENST00000338145 CDAN1Q8IWY9 1227 aa14.11□□□□□ -0.15
UBE2D3-202ENST00000338145 NPDC1Q9NQX5 325 aaPredicted RBP14.11□□□□□ -0.15
UBE2D3-202ENST00000338145 NEXMIFQ5QGS0 1516 aa14.1□□□□□ -0.15
UBE2D3-202ENST00000338145 ROBO2Q9HCK4 1378 aa14.1□□□□□ -0.15
UBE2D3-202ENST00000338145 GPR37O15354 613 aa14.1□□□□□ -0.15
UBE2D3-202ENST00000338145 PSEN2P49810 448 aa14.1□□□□□ -0.15
UBE2D3-202ENST00000338145 HIC1Q14526 733 aa14.1□□□□□ -0.15
UBE2D3-202ENST00000338145 ESCO1Q5FWF5 840 aa14.1□□□□□ -0.15
UBE2D3-202ENST00000338145 UNC5CLQ8IV45 518 aa14.1□□□□□ -0.15
UBE2D3-202ENST00000338145 COL9A1P20849 921 aa14.09□□□□□ -0.15
UBE2D3-202ENST00000338145 LSM11P83369 360 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBE2D3-202ENST00000338145 ZBED2Q9BTP6 218 aa14.09□□□□□ -0.15
UBE2D3-202ENST00000338145 AXIN2Q9Y2T1 843 aa14.08□□□□□ -0.16
UBE2D3-202ENST00000338145 KRTAP3-3Q9BYR6 98 aa14.07□□□□□ -0.16
UBE2D3-202ENST00000338145 KRTAP3-2Q9BYR7 98 aa14.07□□□□□ -0.16
UBE2D3-202ENST00000338145 RPGRIP1LQ68CZ1 1315 aa14.07□□□□□ -0.16
UBE2D3-202ENST00000338145 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms