RNA–Protein interactions for RNA: ENST00000337303.8

PBRM1-202, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-202ENST00000337303 SYCE3A1L190 88 aa8.05□□□□□ -1.12
PBRM1-202ENST00000337303 SLFN5Q08AF3 891 aa8.05□□□□□ -1.12
PBRM1-202ENST00000337303 MAP3K11Q16584 847 aa8.05□□□□□ -1.12
PBRM1-202ENST00000337303 NBPF1Q3BBV0 1214 aa8.05□□□□□ -1.12
PBRM1-202ENST00000337303 DEF6Q9H4E7 631 aa8.05□□□□□ -1.12
PBRM1-202ENST00000337303 SLC4A2P04920 1241 aa8.04□□□□□ -1.12
PBRM1-202ENST00000337303 DNAJC2Q99543 621 aaKnown RBP8.04□□□□□ -1.12
PBRM1-202ENST00000337303 UPF3BQ9BZI7 483 aaKnown RBP8.04□□□□□ -1.12
PBRM1-202ENST00000337303 EVA1CP58658 441 aa8.04□□□□□ -1.12
PBRM1-202ENST00000337303 PSME1Q06323 249 aa8.04□□□□□ -1.12
PBRM1-202ENST00000337303 TMEM132EQ6IEE7 984 aa8.04□□□□□ -1.12
PBRM1-202ENST00000337303 TMCO3Q6UWJ1 677 aa8.04□□□□□ -1.12
PBRM1-202ENST00000337303 KIAA1107Q9UPP5 1409 aa8.04□□□□□ -1.12
PBRM1-202ENST00000337303 MCM5P33992 734 aa8.04□□□□□ -1.12
PBRM1-202ENST00000337303 STIM1Q13586 685 aa8.04□□□□□ -1.12
PBRM1-202ENST00000337303 HSP90AB3PQ58FF7 597 aa8.04□□□□□ -1.12
PBRM1-202ENST00000337303 IQCEQ6IPM2 695 aa8.04□□□□□ -1.12
PBRM1-202ENST00000337303 GBP3Q9H0R5 595 aa8.04□□□□□ -1.12
PBRM1-202ENST00000337303 SMTNL1A8MU46 457 aa8.03□□□□□ -1.12
PBRM1-202ENST00000337303 KRT32Q14532 448 aa8.03□□□□□ -1.12
PBRM1-202ENST00000337303 CCDC181Q5TID7 509 aa8.03□□□□□ -1.12
PBRM1-202ENST00000337303 TRIM22Q8IYM9 498 aa8.03□□□□□ -1.12
PBRM1-202ENST00000337303 CTDP1Q9Y5B0 961 aaPredicted RBP8.03□□□□□ -1.12
PBRM1-202ENST00000337303 FAM177A1Q8N128 213 aaPredicted RBP8.03□□□□□ -1.12
PBRM1-202ENST00000337303 PTPN14Q15678 1187 aa8.03□□□□□ -1.12
PBRM1-202ENST00000337303 ZFYVE27Q5T4F4 411 aa8.03□□□□□ -1.12
PBRM1-202ENST00000337303 HDGFL1Q5TGJ6 251 aa8.03□□□□□ -1.12
PBRM1-202ENST00000337303 KIF18AQ8NI77 898 aa8.03□□□□□ -1.12
PBRM1-202ENST00000337303 PDRG1Q9NUG6 133 aa8.03□□□□□ -1.12
PBRM1-202ENST00000337303 STK3Q13188 491 aa8.02□□□□□ -1.13
PBRM1-202ENST00000337303 SKIDA1Q1XH10 827 aa8.02□□□□□ -1.13
PBRM1-202ENST00000337303 CCAR1Q8IX12 1150 aaKnown RBP8.02□□□□□ -1.13
PBRM1-202ENST00000337303 FANCD2Q9BXW9 1451 aa8.02□□□□□ -1.13
PBRM1-202ENST00000337303 SFPQP23246 707 aaKnown RBP eCLIP8.02□□□□□ -1.13
PBRM1-202ENST00000337303 NLRP6P59044 892 aa8.02□□□□□ -1.13
PBRM1-202ENST00000337303 CCDC183Q5T5S1 534 aa8.02□□□□□ -1.13
PBRM1-202ENST00000337303 CDK5RAP3Q96JB5 506 aa8.02□□□□□ -1.13
PBRM1-202ENST00000337303 SLC12A5Q9H2X9 1139 aa8.02□□□□□ -1.13
PBRM1-202ENST00000337303 ERICH4A6NGS2 130 aa8.02□□□□□ -1.13
PBRM1-202ENST00000337303 CCDC102AQ96A19 550 aa8.02□□□□□ -1.13
PBRM1-202ENST00000337303 JAKMIP1Q96N16 626 aaKnown RBP8.02□□□□□ -1.13
PBRM1-202ENST00000337303 ARAP1Q96P48 1450 aa8.02□□□□□ -1.13
PBRM1-202ENST00000337303 TBC1D2Q9BYX2 928 aa8.01□□□□□ -1.13
PBRM1-202ENST00000337303 CALCOCO1Q9P1Z2 691 aa8.01□□□□□ -1.13
PBRM1-202ENST00000337303 ARHGAP29Q52LW3 1261 aa8.01□□□□□ -1.13
PBRM1-202ENST00000337303 SCAND2PQ9GZW5 306 aaPredicted RBP8.01□□□□□ -1.13
PBRM1-202ENST00000337303 CDKL5O76039 1030 aa8.01□□□□□ -1.13
PBRM1-202ENST00000337303 XPCQ01831 940 aaPredicted RBP8.01□□□□□ -1.13
PBRM1-202ENST00000337303 ZSCAN12O43309 604 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 EPB41L2O43491 1005 aaKnown RBP8□□□□□ -1.13
PBRM1-202ENST00000337303 CBX1P83916 185 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 CCDC158Q5M9N0 1113 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 DDX24Q9GZR7 859 aaKnown RBP eCLIP8□□□□□ -1.131e-6■■■■■ 30.9
PBRM1-202ENST00000337303 CGNQ9P2M7 1197 aaKnown RBP8□□□□□ -1.13
PBRM1-202ENST00000337303 GAPVD1Q14C86 1478 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 SLC3A2P08195 630 aaKnown RBP8□□□□□ -1.13
PBRM1-202ENST00000337303 TMEM57Q8N5G2 664 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 CRACR2AQ9BSW2 395 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 ERBINQ96RT1 1412 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 FGD5Q6ZNL6 1462 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 KDM4AO75164 1064 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 CFAP100Q494V2 611 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 PLEKHO1Q53GL0 409 aaPredicted RBP8□□□□□ -1.13
PBRM1-202ENST00000337303 TNPO1Q92973 898 aaKnown RBP8□□□□□ -1.13
PBRM1-202ENST00000337303 NLRP2Q9NX02 1062 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 CTNNA3Q9UI47 895 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 FYB1O15117 783 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 NEMFO60524 1076 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 FCHSD2O94868 740 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 SYCP1Q15431 976 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 ZRSR2Q15696 482 aaKnown RBP8□□□□□ -1.13
PBRM1-202ENST00000337303 ANO10Q9NW15 660 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 ERICH3Q5RHP9 1530 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 PLEKHH1Q9ULM0 1364 aa8□□□□□ -1.13
PBRM1-202ENST00000337303 WDR97A6NE52 1622 aa7.99□□□□□ -1.13
PBRM1-202ENST00000337303 DYNC1I1O14576 645 aa7.99□□□□□ -1.13
PBRM1-202ENST00000337303 NEFHP12036 1026 aa7.99□□□□□ -1.13
PBRM1-202ENST00000337303 SULT6B1Q6IMI4 303 aa7.99□□□□□ -1.13
PBRM1-202ENST00000337303 PLCD4Q9BRC7 762 aa7.99□□□□□ -1.13
PBRM1-202ENST00000337303 NACAP1Q9BZK3 213 aa7.99□□□□□ -1.13
PBRM1-202ENST00000337303 NOL7Q9UMY1 257 aaKnown RBP7.99□□□□□ -1.13
PBRM1-202ENST00000337303 LRRFIP2Q9Y608 721 aaKnown RBP7.99□□□□□ -1.13
PBRM1-202ENST00000337303 PLEKHH2Q8IVE3 1493 aa7.99□□□□□ -1.13
PBRM1-202ENST00000337303 SRGAP3O43295 1099 aa7.99□□□□□ -1.13
PBRM1-202ENST00000337303 RBM33Q96EV2 1170 aaKnown RBP7.99□□□□□ -1.13
PBRM1-202ENST00000337303 SH2B1Q9NRF2 756 aaPredicted RBP7.99□□□□□ -1.13
PBRM1-202ENST00000337303 CFTRP13569 1480 aa7.99□□□□□ -1.13
PBRM1-202ENST00000337303 RARSP54136 660 aaKnown RBP7.99□□□□□ -1.13
PBRM1-202ENST00000337303 CWC27Q6UX04 472 aaKnown RBP7.99□□□□□ -1.13
PBRM1-202ENST00000337303 KRT18P05783 430 aaKnown RBP7.98□□□□□ -1.13
PBRM1-202ENST00000337303 SSFA2P28290 1259 aa7.98□□□□□ -1.13
PBRM1-202ENST00000337303 CLCN1P35523 988 aa7.98□□□□□ -1.13
PBRM1-202ENST00000337303 SYTL4Q96C24 671 aaPredicted RBP7.98□□□□□ -1.13
PBRM1-202ENST00000337303 PRIMPOLQ96LW4 560 aa7.98□□□□□ -1.13
PBRM1-202ENST00000337303 CENPHQ9H3R5 247 aa7.98□□□□□ -1.13
PBRM1-202ENST00000337303 PRDM10Q9NQV6 1147 aa7.98□□□□□ -1.13
PBRM1-202ENST00000337303 MAP9Q49MG5 647 aa7.98□□□□□ -1.13
PBRM1-202ENST00000337303 FERMT3Q86UX7 667 aa7.98□□□□□ -1.13
PBRM1-202ENST00000337303 CCDC148Q8NFR7 591 aa7.98□□□□□ -1.13
PBRM1-202ENST00000337303 UBE2Q2Q8WVN8 375 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms