RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 PRDM11Q9NQV5 511 aa20.43■□□□□ 0.86
CMC1-201ENST00000334841 PPM1GO15355 546 aaPredicted RBP20.42■□□□□ 0.86
CMC1-201ENST00000334841 ADAMTS2O95450 1211 aa20.42■□□□□ 0.86
CMC1-201ENST00000334841 HOXC9P31274 260 aa20.42■□□□□ 0.86
CMC1-201ENST00000334841 AMPHP49418 695 aa20.41■□□□□ 0.86
CMC1-201ENST00000334841 BLMP54132 1417 aaPredicted RBP20.41■□□□□ 0.86
CMC1-201ENST00000334841 CAMTA1Q9Y6Y1 1673 aa20.41■□□□□ 0.86
CMC1-201ENST00000334841 RGPD5Q99666 1765 aa20.41■□□□□ 0.86
CMC1-201ENST00000334841 INSRP06213 1382 aa20.4■□□□□ 0.86
CMC1-201ENST00000334841 CCDC184Q52MB2 194 aa20.4■□□□□ 0.86
CMC1-201ENST00000334841 IP6K1Q92551 441 aa20.4■□□□□ 0.86
CMC1-201ENST00000334841 NRAPQ86VF7 1730 aa20.39■□□□□ 0.86
CMC1-201ENST00000334841 FAM83GA6ND36 823 aa20.39■□□□□ 0.85
CMC1-201ENST00000334841 HSP90AB2PQ58FF8 381 aa20.39■□□□□ 0.85
CMC1-201ENST00000334841 AXIN2Q9Y2T1 843 aa20.38■□□□□ 0.85
CMC1-201ENST00000334841 NWD2Q9ULI1 1742 aa20.38■□□□□ 0.85
CMC1-201ENST00000334841 SLIT2O94813 1529 aa20.37■□□□□ 0.85
CMC1-201ENST00000334841 COL5A2P05997 1499 aaPredicted RBP20.37■□□□□ 0.85
CMC1-201ENST00000334841 RGPD1P0DJD0 1748 aa20.36■□□□□ 0.85
CMC1-201ENST00000334841 ILDR1Q86SU0 546 aaPredicted RBP20.35■□□□□ 0.85
CMC1-201ENST00000334841 CFAP53Q96M91 514 aa20.35■□□□□ 0.85
CMC1-201ENST00000334841 FAM208AQ9UK61 1670 aaKnown RBP20.35■□□□□ 0.85
CMC1-201ENST00000334841 ERBB3P21860 1342 aa20.34■□□□□ 0.85
CMC1-201ENST00000334841 CCER2I3L3R5 266 aa20.34■□□□□ 0.85
CMC1-201ENST00000334841 C8orf37Q96NL8 207 aa20.34■□□□□ 0.85
CMC1-201ENST00000334841 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
CMC1-201ENST00000334841 EIF4A2Q14240 407 aaKnown RBP20.33■□□□□ 0.85
CMC1-201ENST00000334841 MEX3CQ5U5Q3 659 aaKnown RBP20.32■□□□□ 0.84
CMC1-201ENST00000334841 ANKRD24Q8TF21 1146 aa20.32■□□□□ 0.84
CMC1-201ENST00000334841 BTG4Q9NY30 223 aa20.32■□□□□ 0.84
CMC1-201ENST00000334841 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.32■□□□□ 0.84
CMC1-201ENST00000334841 DIAPH1O60610 1272 aaKnown RBP20.31■□□□□ 0.84
CMC1-201ENST00000334841 IL13P35225 146 aa20.31■□□□□ 0.84
CMC1-201ENST00000334841 LTV1Q96GA3 475 aaPredicted RBP20.31■□□□□ 0.84
CMC1-201ENST00000334841 RGPD2P0DJD1 1756 aa20.31■□□□□ 0.84
CMC1-201ENST00000334841 BCL9LQ86UU0 1499 aa20.3■□□□□ 0.84
CMC1-201ENST00000334841 NGLY1Q96IV0 654 aa20.29■□□□□ 0.84
CMC1-201ENST00000334841 WDR17Q8IZU2 1322 aa20.28■□□□□ 0.84
CMC1-201ENST00000334841 FNBP4Q8N3X1 1017 aaPredicted RBP20.28■□□□□ 0.84
CMC1-201ENST00000334841 NCAPD2Q15021 1401 aa20.27■□□□□ 0.84
CMC1-201ENST00000334841 STRN4Q9NRL3 753 aa20.27■□□□□ 0.84
CMC1-201ENST00000334841 IGSF1Q8N6C5 1336 aa20.27■□□□□ 0.83
CMC1-201ENST00000334841 CRB1P82279 1406 aa20.26■□□□□ 0.83
CMC1-201ENST00000334841 AFF2P51816 1311 aa20.26■□□□□ 0.83
CMC1-201ENST00000334841 CSB-PGBD3P0DP91 1061 aa20.25■□□□□ 0.83
CMC1-201ENST00000334841 LARP1Q6PKG0 1096 aaKnown RBP20.25■□□□□ 0.83
CMC1-201ENST00000334841 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
CMC1-201ENST00000334841 EYA1Q99502 592 aa20.25■□□□□ 0.83
CMC1-201ENST00000334841 U2SURPO15042 1029 aaKnown RBP20.24■□□□□ 0.83
CMC1-201ENST00000334841 NBPF6Q5VWK0 638 aa20.24■□□□□ 0.83
CMC1-201ENST00000334841 UNC5CLQ8IV45 518 aa20.24■□□□□ 0.83
CMC1-201ENST00000334841 NBPF4Q96M43 638 aa20.24■□□□□ 0.83
CMC1-201ENST00000334841 EVA1CP58658 441 aa20.23■□□□□ 0.83
CMC1-201ENST00000334841 USP21Q9UK80 565 aa20.23■□□□□ 0.83
CMC1-201ENST00000334841 NUDCQ9Y266 331 aa20.23■□□□□ 0.83
CMC1-201ENST00000334841 KDRP35968 1356 aa20.22■□□□□ 0.83
CMC1-201ENST00000334841 TOM1L2Q6ZVM7 507 aa20.22■□□□□ 0.83
CMC1-201ENST00000334841 USHBP1Q8N6Y0 703 aa20.22■□□□□ 0.83
CMC1-201ENST00000334841 NLRP2Q9NX02 1062 aa20.22■□□□□ 0.83
CMC1-201ENST00000334841 WNK3Q9BYP7 1800 aa20.22■□□□□ 0.83
CMC1-201ENST00000334841 U2AF1L5P0DN76 240 aaPredicted RBP20.21■□□□□ 0.83
CMC1-201ENST00000334841 U2AF1Q01081 240 aaKnown RBP eCLIP20.21■□□□□ 0.834e-11■■■■■ 37.5
CMC1-201ENST00000334841 WDR43Q15061 677 aaKnown RBP eCLIP20.21■□□□□ 0.83
CMC1-201ENST00000334841 AEBP1Q8IUX7 1158 aa20.21■□□□□ 0.83
CMC1-201ENST00000334841 ATRNO75882 1429 aa20.2■□□□□ 0.82
CMC1-201ENST00000334841 HMOX1P09601 288 aa20.19■□□□□ 0.82
CMC1-201ENST00000334841 VPS72Q15906 364 aa20.19■□□□□ 0.82
CMC1-201ENST00000334841 SULT6B1Q6IMI4 303 aa20.19■□□□□ 0.82
CMC1-201ENST00000334841 CARD10Q9BWT7 1032 aa20.19■□□□□ 0.82
CMC1-201ENST00000334841 ADAMTS8Q9UP79 889 aa20.19■□□□□ 0.82
CMC1-201ENST00000334841 GLI3P10071 1580 aa20.19■□□□□ 0.82
CMC1-201ENST00000334841 MEGF6O75095 1541 aa20.18■□□□□ 0.82
CMC1-201ENST00000334841 RSPH6AQ9H0K4 717 aa20.18■□□□□ 0.82
CMC1-201ENST00000334841 SPATA31A1Q5TZJ5 1347 aa20.18■□□□□ 0.82
CMC1-201ENST00000334841 SPATA31A5Q5VU36 1347 aa20.18■□□□□ 0.82
CMC1-201ENST00000334841 SPATA31A7Q8IWB4 1347 aa20.18■□□□□ 0.82
CMC1-201ENST00000334841 FAM9BQ8IZU0 186 aa20.17■□□□□ 0.82
CMC1-201ENST00000334841 DISP2A7MBM2 1401 aa20.17■□□□□ 0.82
CMC1-201ENST00000334841 PARP4Q9UKK3 1724 aaKnown RBP20.16■□□□□ 0.82
CMC1-201ENST00000334841 USP35Q9P2H5 1018 aa20.15■□□□□ 0.82
CMC1-201ENST00000334841 CCDC9Q9Y3X0 531 aaKnown RBP20.14■□□□□ 0.81
CMC1-201ENST00000334841 PKD1L3Q7Z443 1732 aa20.13■□□□□ 0.81
CMC1-201ENST00000334841 OVOS2A0A0G2JMS6 1433 aa20.13■□□□□ 0.81
CMC1-201ENST00000334841 FCHSD2O94868 740 aa20.13■□□□□ 0.81
CMC1-201ENST00000334841 PRKAR2BP31323 418 aa20.13■□□□□ 0.81
CMC1-201ENST00000334841 TRPC5Q9UL62 973 aaPredicted RBP20.13■□□□□ 0.81
CMC1-201ENST00000334841 THSD7AQ9UPZ6 1657 aa20.13■□□□□ 0.81
CMC1-201ENST00000334841 ZNF772Q68DY9 489 aaPredicted RBP20.12■□□□□ 0.81
CMC1-201ENST00000334841 TCP11L2Q8N4U5 519 aa20.12■□□□□ 0.81
CMC1-201ENST00000334841 PLEKHF1Q96S99 279 aa20.12■□□□□ 0.81
CMC1-201ENST00000334841 RGS17Q9UGC6 210 aaPredicted RBP20.12■□□□□ 0.81
CMC1-201ENST00000334841 LRRC37A3O60309 1634 aa20.12■□□□□ 0.81
CMC1-201ENST00000334841 CCDC146Q8IYE0 955 aa20.11■□□□□ 0.81
CMC1-201ENST00000334841 SHANK3Q9BYB0 1731 aa20.1■□□□□ 0.81
CMC1-201ENST00000334841 PLEKHG2Q9H7P9 1386 aa20.1■□□□□ 0.81
CMC1-201ENST00000334841 GJD4Q96KN9 370 aaPredicted RBP20.1■□□□□ 0.81
CMC1-201ENST00000334841 QTRT2Q9H974 415 aaKnown RBP20.1■□□□□ 0.81
CMC1-201ENST00000334841 THRAP3Q9Y2W1 955 aaKnown RBP20.1■□□□□ 0.81
CMC1-201ENST00000334841 IL2RBP14784 551 aa20.09■□□□□ 0.81
CMC1-201ENST00000334841 BARGINQ6ZT62 677 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms