RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ANKRD24Q8TF21 1146 aa14.89□□□□□ -0.03
HDAC6-201ENST00000334136 C8orf37Q96NL8 207 aa14.88□□□□□ -0.03
HDAC6-201ENST00000334136 E9PSI1 815 aa14.88□□□□□ -0.03
HDAC6-201ENST00000334136 POLKQ9UBT6 870 aa14.88□□□□□ -0.03
HDAC6-201ENST00000334136 ADGRL3Q9HAR2 1447 aa14.87□□□□□ -0.03
HDAC6-201ENST00000334136 C3P01024 1663 aa14.87□□□□□ -0.03
HDAC6-201ENST00000334136 TRPM1Q7Z4N2 1603 aa14.87□□□□□ -0.03
HDAC6-201ENST00000334136 ARHGEF10O15013 1369 aa14.86□□□□□ -0.03
HDAC6-201ENST00000334136 IPO8O15397 1037 aaKnown RBP14.86□□□□□ -0.03
HDAC6-201ENST00000334136 GNAI1P63096 354 aa14.86□□□□□ -0.03
HDAC6-201ENST00000334136 TSPYL4Q9UJ04 414 aa14.86□□□□□ -0.03
HDAC6-201ENST00000334136 SMC4Q9NTJ3 1288 aa14.85□□□□□ -0.03
HDAC6-201ENST00000334136 ANO8Q9HCE9 1232 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-201ENST00000334136 MAP3K19Q56UN5 1328 aa14.85□□□□□ -0.03
HDAC6-201ENST00000334136 TPRNQ4KMQ1 711 aa14.85□□□□□ -0.03
HDAC6-201ENST00000334136 BRINP3Q76B58 766 aa14.85□□□□□ -0.03
HDAC6-201ENST00000334136 IL27Q8NEV9 243 aa14.84□□□□□ -0.03
HDAC6-201ENST00000334136 CERKQ8TCT0 537 aa14.84□□□□□ -0.03
HDAC6-201ENST00000334136 LAMC1P11047 1609 aa14.83□□□□□ -0.03
HDAC6-201ENST00000334136 GOLGA6L22H0YM25 854 aa14.83□□□□□ -0.03
HDAC6-201ENST00000334136 KDM5AP29375 1690 aaKnown RBP14.83□□□□□ -0.04
HDAC6-201ENST00000334136 SETBP1Q9Y6X0 1596 aa14.83□□□□□ -0.04
HDAC6-201ENST00000334136 EIF2S2P20042 333 aaKnown RBP14.83□□□□□ -0.04
HDAC6-201ENST00000334136 RRP1P56182 461 aaKnown RBP14.83□□□□□ -0.04
HDAC6-201ENST00000334136 FLT4P35916 1363 aa14.82□□□□□ -0.04
HDAC6-201ENST00000334136 GSE1Q14687 1217 aa14.82□□□□□ -0.04
HDAC6-201ENST00000334136 MROH2AA6NES4 1674 aa14.82□□□□□ -0.04
HDAC6-201ENST00000334136 HSP90AB1P08238 724 aaKnown RBP14.82□□□□□ -0.04
HDAC6-201ENST00000334136 IP6K1Q92551 441 aa14.82□□□□□ -0.04
HDAC6-201ENST00000334136 PTCH1Q13635 1447 aa14.82□□□□□ -0.04
HDAC6-201ENST00000334136 CHMP4BQ9H444 224 aaKnown RBP14.81□□□□□ -0.04
HDAC6-201ENST00000334136 SLIT1O75093 1534 aa14.81□□□□□ -0.04
HDAC6-201ENST00000334136 NFE2L2Q16236 605 aa14.81□□□□□ -0.04
HDAC6-201ENST00000334136 AMOTQ4VCS5 1084 aa14.81□□□□□ -0.04
HDAC6-201ENST00000334136 ARHGAP23Q9P227 1491 aa14.81□□□□□ -0.04
HDAC6-201ENST00000334136 EXOC5O00471 708 aa14.81□□□□□ -0.04
HDAC6-201ENST00000334136 CABP4P57796 275 aa14.81□□□□□ -0.04
HDAC6-201ENST00000334136 BTG4Q9NY30 223 aa14.81□□□□□ -0.04
HDAC6-201ENST00000334136 PARD3Q8TEW0 1356 aa14.81□□□□□ -0.04
HDAC6-201ENST00000334136 ANKARQ7Z5J8 1434 aa14.81□□□□□ -0.04
HDAC6-201ENST00000334136 PTPRUQ92729 1446 aa14.81□□□□□ -0.04
HDAC6-201ENST00000334136 TMPOP42166 694 aaKnown RBP14.81□□□□□ -0.04
HDAC6-201ENST00000334136 EIF4A2Q14240 407 aaKnown RBP14.81□□□□□ -0.04
HDAC6-201ENST00000334136 HOXC9P31274 260 aa14.8□□□□□ -0.04
HDAC6-201ENST00000334136 NECTIN2Q92692 538 aa14.8□□□□□ -0.04
HDAC6-201ENST00000334136 NPC1L1Q9UHC9 1359 aa14.8□□□□□ -0.04
HDAC6-201ENST00000334136 CRBNQ96SW2 442 aa14.79□□□□□ -0.04
HDAC6-201ENST00000334136 NRXN1Q9ULB1 1477 aa14.79□□□□□ -0.04
HDAC6-201ENST00000334136 BCL2L13Q9BXK5 485 aa14.79□□□□□ -0.04
HDAC6-201ENST00000334136 GNAT3A8MTJ3 354 aa14.79□□□□□ -0.04
HDAC6-201ENST00000334136 KAT6BQ8WYB5 2073 aa14.79□□□□□ -0.04
HDAC6-201ENST00000334136 MYO3AQ8NEV4 1616 aa14.79□□□□□ -0.04
HDAC6-201ENST00000334136 L1TD1Q5T7N2 865 aaKnown RBP14.78□□□□□ -0.04
HDAC6-201ENST00000334136 ATP7BP35670 1465 aa14.78□□□□□ -0.04
HDAC6-201ENST00000334136 USP6P35125 1406 aa14.78□□□□□ -0.04
HDAC6-201ENST00000334136 NEURL4Q96JN8 1562 aa14.77□□□□□ -0.04
HDAC6-201ENST00000334136 SIGLEC1Q9BZZ2 1709 aa14.77□□□□□ -0.04
HDAC6-201ENST00000334136 SLC4A10Q6U841 1118 aa14.77□□□□□ -0.04
HDAC6-201ENST00000334136 CLUAP1Q96AJ1 413 aa14.77□□□□□ -0.04
HDAC6-201ENST00000334136 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.04
HDAC6-201ENST00000334136 PPLO60437 1756 aa14.77□□□□□ -0.05
HDAC6-201ENST00000334136 EYA1Q99502 592 aa14.76□□□□□ -0.05
HDAC6-201ENST00000334136 DLC1Q96QB1 1528 aa14.76□□□□□ -0.05
HDAC6-201ENST00000334136 AEBP1Q8IUX7 1158 aa14.76□□□□□ -0.05
HDAC6-201ENST00000334136 PTMAP06454 111 aaKnown RBP14.75□□□□□ -0.05
HDAC6-201ENST00000334136 CDCA7LQ96GN5 454 aa14.75□□□□□ -0.05
HDAC6-201ENST00000334136 POLR3AO14802 1390 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-201ENST00000334136 SBNO1A3KN83 1393 aa14.75□□□□□ -0.05
HDAC6-201ENST00000334136 DCTN1Q14203 1278 aa14.75□□□□□ -0.05
HDAC6-201ENST00000334136 MPRIPQ6WCQ1 1025 aa14.75□□□□□ -0.05
HDAC6-201ENST00000334136 MCM10Q7L590 875 aa14.75□□□□□ -0.05
HDAC6-201ENST00000334136 THUMPD2Q9BTF0 503 aaKnown RBP14.75□□□□□ -0.05
HDAC6-201ENST00000334136 DNTTIP2Q5QJE6 756 aaKnown RBP14.74□□□□□ -0.05
HDAC6-201ENST00000334136 HSCBQ8IWL3 235 aa14.74□□□□□ -0.05
HDAC6-201ENST00000334136 IFNL2Q8IZJ0 200 aa14.74□□□□□ -0.05
HDAC6-201ENST00000334136 ADAMTSL3P82987 1691 aa14.74□□□□□ -0.05
HDAC6-201ENST00000334136 TECPR2O15040 1411 aa14.74□□□□□ -0.05
HDAC6-201ENST00000334136 C1orf167Q5SNV9 1468 aa14.74□□□□□ -0.05
HDAC6-201ENST00000334136 UBR1Q8IWV7 1749 aa14.74□□□□□ -0.05
HDAC6-201ENST00000334136 SF3B2Q13435 895 aaKnown RBP14.74□□□□□ -0.05
HDAC6-201ENST00000334136 DIP2AQ14689 1571 aa14.73□□□□□ -0.05
HDAC6-201ENST00000334136 ITPRIPQ8IWB1 547 aa14.73□□□□□ -0.05
HDAC6-201ENST00000334136 WDR63Q8IWG1 891 aa14.73□□□□□ -0.05
HDAC6-201ENST00000334136 ZCRB1Q8TBF4 217 aaKnown RBP14.73□□□□□ -0.05
HDAC6-201ENST00000334136 SPATA31A3Q5VYP0 1347 aa14.73□□□□□ -0.05
HDAC6-201ENST00000334136 TSR2Q969E8 191 aaKnown RBP14.73□□□□□ -0.05
HDAC6-201ENST00000334136 BRPF3Q9ULD4 1205 aa14.73□□□□□ -0.05
HDAC6-201ENST00000334136 MYO5BQ9ULV0 1848 aa14.73□□□□□ -0.05
HDAC6-201ENST00000334136 TULP4Q9NRJ4 1543 aa14.72□□□□□ -0.05
HDAC6-201ENST00000334136 IL2RBP14784 551 aa14.72□□□□□ -0.05
HDAC6-201ENST00000334136 NKTRP30414 1462 aaKnown RBP14.72□□□□□ -0.05
HDAC6-201ENST00000334136 ADGRB1O14514 1584 aa14.72□□□□□ -0.05
HDAC6-201ENST00000334136 WWC1Q8IX03 1113 aa14.72□□□□□ -0.05
HDAC6-201ENST00000334136 ARID3AQ99856 593 aa14.72□□□□□ -0.05
HDAC6-201ENST00000334136 QRICH2Q9H0J4 1663 aa14.72□□□□□ -0.05
HDAC6-201ENST00000334136 KIAA1210Q9ULL0 1709 aa14.72□□□□□ -0.05
HDAC6-201ENST00000334136 BTBD11A6QL63 1104 aa14.72□□□□□ -0.05
HDAC6-201ENST00000334136 EXOSC9Q06265 439 aaKnown RBP14.72□□□□□ -0.05
HDAC6-201ENST00000334136 GTF2E1P29083 439 aaPredicted RBP14.71□□□□□ -0.05
HDAC6-201ENST00000334136 DDB1Q16531 1140 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms