RNA–Protein interactions for RNA: ENST00000332904.7

CDHR1-201, Transcript of cadherin related family member 1, humanhuman

TSL 1 (best) BASIC

Gene CDHR1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-201ENST00000332904 ATP2B3Q16720 1220 aa22.14■■□□□ 1.13
CDHR1-201ENST00000332904 UTP14CQ5TAP6 766 aaKnown RBP22.13■■□□□ 1.13
CDHR1-201ENST00000332904 PLEKHM2Q8IWE5 1019 aa22.13■■□□□ 1.13
CDHR1-201ENST00000332904 OTUD7AQ8TE49 926 aaPredicted RBP22.13■■□□□ 1.13
CDHR1-201ENST00000332904 TRAPPC8Q9Y2L5 1435 aa22.12■■□□□ 1.13
CDHR1-201ENST00000332904 KIAA1210Q9ULL0 1709 aa22.11■■□□□ 1.13
CDHR1-201ENST00000332904 CHGAP10645 457 aaKnown RBP22.11■■□□□ 1.13
CDHR1-201ENST00000332904 AFAP1Q8N556 730 aa22.11■■□□□ 1.13
CDHR1-201ENST00000332904 MAP3K4Q9Y6R4 1608 aa22.11■■□□□ 1.13
CDHR1-201ENST00000332904 PPP4R3BQ5MIZ7 849 aa22.11■■□□□ 1.13
CDHR1-201ENST00000332904 TPRNQ4KMQ1 711 aa22.1■■□□□ 1.13
CDHR1-201ENST00000332904 GGNBP2Q9H3C7 697 aa22.1■■□□□ 1.13
CDHR1-201ENST00000332904 TTC12Q9H892 705 aaPredicted RBP22.1■■□□□ 1.13
CDHR1-201ENST00000332904 CWC22Q9HCG8 908 aaKnown RBP22.1■■□□□ 1.13
CDHR1-201ENST00000332904 SPDYE4A6NLX3 237 aa22.1■■□□□ 1.13
CDHR1-201ENST00000332904 NCBP3Q53F19 620 aaKnown RBP22.1■■□□□ 1.13
CDHR1-201ENST00000332904 APBB1O00213 710 aa22.09■■□□□ 1.13
CDHR1-201ENST00000332904 IGSF3O75054 1194 aa22.09■■□□□ 1.13
CDHR1-201ENST00000332904 THUMPD2Q9BTF0 503 aaKnown RBP22.09■■□□□ 1.13
CDHR1-201ENST00000332904 FGD1P98174 961 aa22.09■■□□□ 1.13
CDHR1-201ENST00000332904 TSPYL6Q8N831 410 aa22.09■■□□□ 1.13
CDHR1-201ENST00000332904 ADGRL1O94910 1474 aa22.08■■□□□ 1.13
CDHR1-201ENST00000332904 TSPY26PQ9H489 355 aa22.08■■□□□ 1.13
CDHR1-201ENST00000332904 GDPD2Q9HCC8 539 aa22.08■■□□□ 1.13
CDHR1-201ENST00000332904 SBNO2Q9Y2G9 1366 aa22.08■■□□□ 1.13
CDHR1-201ENST00000332904 ALDH1L2Q3SY69 923 aa22.08■■□□□ 1.12
CDHR1-201ENST00000332904 ST18O60284 1047 aa22.07■■□□□ 1.12
CDHR1-201ENST00000332904 NOLC1Q14978 699 aaKnown RBP eCLIP22.07■■□□□ 1.12
CDHR1-201ENST00000332904 MED14O60244 1454 aa22.07■■□□□ 1.12
CDHR1-201ENST00000332904 TTC22Q5TAA0 569 aa22.06■■□□□ 1.12
CDHR1-201ENST00000332904 SAFB2Q14151 953 aaKnown RBP eCLIP22.06■■□□□ 1.12
CDHR1-201ENST00000332904 NOL8Q76FK4 1167 aaKnown RBP22.06■■□□□ 1.12
CDHR1-201ENST00000332904 USP25Q9UHP3 1055 aa22.06■■□□□ 1.12
CDHR1-201ENST00000332904 IL16Q14005 1332 aa22.06■■□□□ 1.12
CDHR1-201ENST00000332904 SENP3Q9H4L4 574 aaPredicted RBP22.05■■□□□ 1.12
CDHR1-201ENST00000332904 SPAG9O60271 1321 aaKnown RBP22.05■■□□□ 1.12
CDHR1-201ENST00000332904 CABP2Q9NPB3 220 aa22.05■■□□□ 1.12
CDHR1-201ENST00000332904 MRPL50Q8N5N7 158 aaKnown RBP22.04■■□□□ 1.12
CDHR1-201ENST00000332904 KIF3BO15066 747 aa22.03■■□□□ 1.12
CDHR1-201ENST00000332904 GADD45BO75293 160 aaPredicted RBP22.03■■□□□ 1.12
CDHR1-201ENST00000332904 PIBF1Q8WXW3 757 aa22.03■■□□□ 1.12
CDHR1-201ENST00000332904 SMARCA5O60264 1052 aaPredicted RBP22.03■■□□□ 1.12
CDHR1-201ENST00000332904 SDSP20132 328 aa22.03■■□□□ 1.12
CDHR1-201ENST00000332904 INTS3Q68E01 1043 aaKnown RBP22.03■■□□□ 1.12
CDHR1-201ENST00000332904 PPRC1Q5VV67 1664 aaKnown RBP22.03■■□□□ 1.12
CDHR1-201ENST00000332904 MBD3O95983 291 aa22.03■■□□□ 1.12
CDHR1-201ENST00000332904 BCL2L12Q9HB09 334 aa22.02■■□□□ 1.12
CDHR1-201ENST00000332904 VAMP4O75379 141 aa22.02■■□□□ 1.11
CDHR1-201ENST00000332904 PRIMPOLQ96LW4 560 aa22.02■■□□□ 1.11
CDHR1-201ENST00000332904 KIF3AQ9Y496 699 aa22.02■■□□□ 1.11
CDHR1-201ENST00000332904 MYOM2P54296 1465 aa22.01■■□□□ 1.11
CDHR1-201ENST00000332904 MYO3AQ8NEV4 1616 aa22■■□□□ 1.11
CDHR1-201ENST00000332904 NEK4P51957 841 aa22■■□□□ 1.11
CDHR1-201ENST00000332904 TMX3Q96JJ7 454 aa22■■□□□ 1.11
CDHR1-201ENST00000332904 QRICH2Q9H0J4 1663 aa22■■□□□ 1.11
CDHR1-201ENST00000332904 EFCAB2Q5VUJ9 269 aa22■■□□□ 1.11
CDHR1-201ENST00000332904 HMGN5P82970 282 aaKnown RBP21.99■■□□□ 1.11
CDHR1-201ENST00000332904 NUTM2DQ5VT03 806 aaPredicted RBP21.99■■□□□ 1.11
CDHR1-201ENST00000332904 GTPBP4Q9BZE4 634 aaKnown RBP21.99■■□□□ 1.11
CDHR1-201ENST00000332904 GTF2F1P35269 517 aaKnown RBP eCLIP21.98■■□□□ 1.11
CDHR1-201ENST00000332904 ADCY5O95622 1261 aa21.98■■□□□ 1.11
CDHR1-201ENST00000332904 FBLN1P23142 703 aa21.98■■□□□ 1.11
CDHR1-201ENST00000332904 U2AF2P26368 475 aaKnown RBP eCLIP21.98■■□□□ 1.11
CDHR1-201ENST00000332904 PLCB2Q00722 1185 aa21.97■■□□□ 1.11
CDHR1-201ENST00000332904 ANKRD36BQ8N2N9 1353 aa21.97■■□□□ 1.11
CDHR1-201ENST00000332904 BRD1O95696 1058 aa21.96■■□□□ 1.11
CDHR1-201ENST00000332904 BBXQ8WY36 941 aaPredicted RBP21.96■■□□□ 1.11
CDHR1-201ENST00000332904 DCTPP1Q9H773 170 aa21.96■■□□□ 1.11
CDHR1-201ENST00000332904 ABCC4O15439 1325 aa21.96■■□□□ 1.11
CDHR1-201ENST00000332904 PDCL2Q8N4E4 241 aa21.96■■□□□ 1.11
CDHR1-201ENST00000332904 TET3O43151 1660 aa21.95■■□□□ 1.1
CDHR1-201ENST00000332904 USP32Q8NFA0 1604 aa21.95■■□□□ 1.1
CDHR1-201ENST00000332904 DIAPH1O60610 1272 aaKnown RBP21.95■■□□□ 1.1
CDHR1-201ENST00000332904 HCLS1P14317 486 aaPredicted RBP21.95■■□□□ 1.1
CDHR1-201ENST00000332904 PRKAR2BP31323 418 aa21.95■■□□□ 1.1
CDHR1-201ENST00000332904 COL3A1P02461 1466 aaPredicted RBP21.95■■□□□ 1.1
CDHR1-201ENST00000332904 MROH2AA6NES4 1674 aa21.95■■□□□ 1.1
CDHR1-201ENST00000332904 CHMP4BQ9H444 224 aaKnown RBP21.94■■□□□ 1.1
CDHR1-201ENST00000332904 KIF20AO95235 890 aa21.94■■□□□ 1.1
CDHR1-201ENST00000332904 FKBP5Q13451 457 aaPredicted RBP21.94■■□□□ 1.1
CDHR1-201ENST00000332904 PIK3R4Q99570 1358 aa21.94■■□□□ 1.1
CDHR1-201ENST00000332904 PTCH1Q13635 1447 aa21.94■■□□□ 1.1
CDHR1-201ENST00000332904 BRPF1P55201 1214 aaPredicted RBP21.93■■□□□ 1.1
CDHR1-201ENST00000332904 PHACTR3Q96KR7 559 aa21.93■■□□□ 1.1
CDHR1-201ENST00000332904 USP48Q86UV5 1035 aa21.93■■□□□ 1.1
CDHR1-201ENST00000332904 ARHGAP45Q92619 1136 aa21.93■■□□□ 1.1
CDHR1-201ENST00000332904 TCHHQ07283 1943 aa21.93■■□□□ 1.1
CDHR1-201ENST00000332904 KNDC1Q76NI1 1749 aa21.93■■□□□ 1.1
CDHR1-201ENST00000332904 HMOX1P09601 288 aa21.93■■□□□ 1.1
CDHR1-201ENST00000332904 CASC1Q6TDU7 716 aa21.93■■□□□ 1.1
CDHR1-201ENST00000332904 A0A1W2PP64 1363 aa21.92■■□□□ 1.1
CDHR1-201ENST00000332904 NSD2O96028 1365 aa21.92■■□□□ 1.1
CDHR1-201ENST00000332904 RIOK3O14730 519 aaKnown RBP21.92■■□□□ 1.1
CDHR1-201ENST00000332904 SYAP1Q96A49 352 aaPredicted RBP21.92■■□□□ 1.1
CDHR1-201ENST00000332904 C14orf93Q9H972 538 aaKnown RBP21.92■■□□□ 1.1
CDHR1-201ENST00000332904 EVC2Q86UK5 1308 aa21.92■■□□□ 1.1
CDHR1-201ENST00000332904 ZC3H13Q5T200 1668 aaKnown RBP21.92■■□□□ 1.1
CDHR1-201ENST00000332904 PLCH2O75038 1416 aa21.92■■□□□ 1.1
CDHR1-201ENST00000332904 INO80Q9ULG1 1556 aaPredicted RBP21.91■■□□□ 1.1
CDHR1-201ENST00000332904 REC8O95072 547 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms