RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 NGLY1Q96IV0 654 aa21.87■■□□□ 1.09
LRRC28-202ENST00000331450 BLMP54132 1417 aaPredicted RBP21.87■■□□□ 1.09
LRRC28-202ENST00000331450 RRS1Q15050 365 aaKnown RBP21.86■■□□□ 1.09
LRRC28-202ENST00000331450 CDK12Q9NYV4 1490 aaPredicted RBP21.85■■□□□ 1.09
LRRC28-202ENST00000331450 WNK3Q9BYP7 1800 aa21.85■■□□□ 1.09
LRRC28-202ENST00000331450 RGPD2P0DJD1 1756 aa21.84■■□□□ 1.09
LRRC28-202ENST00000331450 POLKQ9UBT6 870 aa21.84■■□□□ 1.09
LRRC28-202ENST00000331450 FLT4P35916 1363 aa21.84■■□□□ 1.09
LRRC28-202ENST00000331450 ATRNO75882 1429 aa21.83■■□□□ 1.09
LRRC28-202ENST00000331450 TNNT2P45379 298 aaPredicted RBP21.83■■□□□ 1.09
LRRC28-202ENST00000331450 BTG4Q9NY30 223 aa21.83■■□□□ 1.09
LRRC28-202ENST00000331450 AXIN2Q9Y2T1 843 aa21.83■■□□□ 1.09
LRRC28-202ENST00000331450 EMILIN1Q9Y6C2 1016 aa21.83■■□□□ 1.09
LRRC28-202ENST00000331450 ZBTB7CA1YPR0 619 aa21.82■■□□□ 1.08
LRRC28-202ENST00000331450 HOXC9P31274 260 aa21.82■■□□□ 1.08
LRRC28-202ENST00000331450 IP6K1Q92551 441 aa21.82■■□□□ 1.08
LRRC28-202ENST00000331450 RGS17Q9UGC6 210 aaPredicted RBP21.82■■□□□ 1.08
LRRC28-202ENST00000331450 GLI3P10071 1580 aa21.82■■□□□ 1.08
LRRC28-202ENST00000331450 USP21Q9UK80 565 aa21.81■■□□□ 1.08
LRRC28-202ENST00000331450 INSRP06213 1382 aa21.8■■□□□ 1.08
LRRC28-202ENST00000331450 CNGB1Q14028 1251 aaPredicted RBP21.8■■□□□ 1.08
LRRC28-202ENST00000331450 UNC5CLQ8IV45 518 aa21.8■■□□□ 1.08
LRRC28-202ENST00000331450 AMPHP49418 695 aa21.79■■□□□ 1.08
LRRC28-202ENST00000331450 ERBB3P21860 1342 aa21.79■■□□□ 1.08
LRRC28-202ENST00000331450 COL3A1P02461 1466 aaPredicted RBP21.78■■□□□ 1.08
LRRC28-202ENST00000331450 RGPD1P0DJD0 1748 aa21.78■■□□□ 1.08
LRRC28-202ENST00000331450 ZNF772Q68DY9 489 aaPredicted RBP21.78■■□□□ 1.08
LRRC28-202ENST00000331450 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
LRRC28-202ENST00000331450 WDR17Q8IZU2 1322 aa21.77■■□□□ 1.07
LRRC28-202ENST00000331450 CRB1P82279 1406 aa21.76■■□□□ 1.07
LRRC28-202ENST00000331450 PPP2R1AP30153 589 aa21.75■■□□□ 1.07
LRRC28-202ENST00000331450 RALBP1Q15311 655 aa21.75■■□□□ 1.07
LRRC28-202ENST00000331450 VPS72Q15906 364 aa21.75■■□□□ 1.07
LRRC28-202ENST00000331450 HSP90AB2PQ58FF8 381 aa21.75■■□□□ 1.07
LRRC28-202ENST00000331450 PRKRIP1Q9H875 184 aaPredicted RBP21.75■■□□□ 1.07
LRRC28-202ENST00000331450 MTHFSP49914 203 aa21.74■■□□□ 1.07
LRRC28-202ENST00000331450 STRN4Q9NRL3 753 aa21.74■■□□□ 1.07
LRRC28-202ENST00000331450 TRPC5Q9UL62 973 aaPredicted RBP21.74■■□□□ 1.07
LRRC28-202ENST00000331450 THSD7AQ9UPZ6 1657 aa21.74■■□□□ 1.07
LRRC28-202ENST00000331450 LARP1Q6PKG0 1096 aaKnown RBP21.73■■□□□ 1.07
LRRC28-202ENST00000331450 ANKRD24Q8TF21 1146 aa21.73■■□□□ 1.07
LRRC28-202ENST00000331450 NCAPD2Q15021 1401 aa21.72■■□□□ 1.07
LRRC28-202ENST00000331450 PPM1GO15355 546 aaPredicted RBP21.72■■□□□ 1.07
LRRC28-202ENST00000331450 SPATA31A5Q5VU36 1347 aa21.72■■□□□ 1.07
LRRC28-202ENST00000331450 SPATA31A7Q8IWB4 1347 aa21.72■■□□□ 1.07
LRRC28-202ENST00000331450 POTEAQ6S8J7 498 aa21.71■■□□□ 1.07
LRRC28-202ENST00000331450 QTRT2Q9H974 415 aaKnown RBP21.71■■□□□ 1.07
LRRC28-202ENST00000331450 PARP4Q9UKK3 1724 aaKnown RBP21.71■■□□□ 1.07
LRRC28-202ENST00000331450 EVA1CP58658 441 aa21.7■■□□□ 1.06
LRRC28-202ENST00000331450 SPATA31A1Q5TZJ5 1347 aa21.7■■□□□ 1.06
LRRC28-202ENST00000331450 MYBBP1AQ9BQG0 1328 aaKnown RBP21.7■■□□□ 1.06
LRRC28-202ENST00000331450 GJD4Q96KN9 370 aaPredicted RBP21.68■■□□□ 1.06
LRRC28-202ENST00000331450 LRRC37A3O60309 1634 aa21.68■■□□□ 1.06
LRRC28-202ENST00000331450 EIF4A2Q14240 407 aaKnown RBP21.67■■□□□ 1.06
LRRC28-202ENST00000331450 LTV1Q96GA3 475 aaPredicted RBP21.67■■□□□ 1.06
LRRC28-202ENST00000331450 CARD10Q9BWT7 1032 aa21.67■■□□□ 1.06
LRRC28-202ENST00000331450 BRWD3Q6RI45 1802 aa21.66■■□□□ 1.06
LRRC28-202ENST00000331450 DISP2A7MBM2 1401 aa21.66■■□□□ 1.06
LRRC28-202ENST00000331450 CSB-PGBD3P0DP91 1061 aa21.66■■□□□ 1.06
LRRC28-202ENST00000331450 TOM1L2Q6ZVM7 507 aa21.66■■□□□ 1.06
LRRC28-202ENST00000331450 RBM6P78332 1123 aaKnown RBP21.65■■□□□ 1.06
LRRC28-202ENST00000331450 SHANK3Q9BYB0 1731 aa21.64■■□□□ 1.06
LRRC28-202ENST00000331450 CCDC9Q9Y3X0 531 aaKnown RBP21.64■■□□□ 1.05
LRRC28-202ENST00000331450 PKD1L3Q7Z443 1732 aa21.63■■□□□ 1.05
LRRC28-202ENST00000331450 IGSF1Q8N6C5 1336 aa21.63■■□□□ 1.05
LRRC28-202ENST00000331450 ANP32CO43423 234 aa21.63■■□□□ 1.05
LRRC28-202ENST00000331450 IL13P35225 146 aa21.63■■□□□ 1.05
LRRC28-202ENST00000331450 NBPF6Q5VWK0 638 aa21.63■■□□□ 1.05
LRRC28-202ENST00000331450 NBPF4Q96M43 638 aa21.63■■□□□ 1.05
LRRC28-202ENST00000331450 NLRP2Q9NX02 1062 aa21.63■■□□□ 1.05
LRRC28-202ENST00000331450 THRAP3Q9Y2W1 955 aaKnown RBP21.63■■□□□ 1.05
LRRC28-202ENST00000331450 RGS12O14924 1447 aa21.63■■□□□ 1.05
LRRC28-202ENST00000331450 BARGINQ6ZT62 677 aa21.62■■□□□ 1.05
LRRC28-202ENST00000331450 TCP11L2Q8N4U5 519 aa21.62■■□□□ 1.05
LRRC28-202ENST00000331450 ONECUT3O60422 494 aaPredicted RBP21.61■■□□□ 1.05
LRRC28-202ENST00000331450 RXRBP28702 533 aa21.61■■□□□ 1.05
LRRC28-202ENST00000331450 CFAP53Q96M91 514 aa21.61■■□□□ 1.05
LRRC28-202ENST00000331450 EYA1Q99502 592 aa21.61■■□□□ 1.05
LRRC28-202ENST00000331450 USP35Q9P2H5 1018 aa21.61■■□□□ 1.05
LRRC28-202ENST00000331450 MEGF6O75095 1541 aa21.6■■□□□ 1.05
LRRC28-202ENST00000331450 DIAPH1O60610 1272 aaKnown RBP21.6■■□□□ 1.05
LRRC28-202ENST00000331450 KDRP35968 1356 aa21.59■■□□□ 1.05
LRRC28-202ENST00000331450 FAM98CQ17RN3 349 aaKnown RBP21.58■■□□□ 1.05
LRRC28-202ENST00000331450 USHBP1Q8N6Y0 703 aa21.58■■□□□ 1.05
LRRC28-202ENST00000331450 OVOS2A0A0G2JMS6 1433 aa21.56■■□□□ 1.04
LRRC28-202ENST00000331450 DIEXFQ68CQ4 756 aaKnown RBP21.56■■□□□ 1.04
LRRC28-202ENST00000331450 PLEKHG2Q9H7P9 1386 aa21.56■■□□□ 1.04
LRRC28-202ENST00000331450 TNS2Q63HR2 1409 aa21.55■■□□□ 1.04
LRRC28-202ENST00000331450 CDCA7Q9BWT1 371 aaPredicted RBP21.54■■□□□ 1.04
LRRC28-202ENST00000331450 IL2RBP14784 551 aa21.53■■□□□ 1.04
LRRC28-202ENST00000331450 AEBP1Q8IUX7 1158 aa21.52■■□□□ 1.04
LRRC28-202ENST00000331450 SEPT12Q8IYM1 358 aa21.52■■□□□ 1.04
LRRC28-202ENST00000331450 CCDC184Q52MB2 194 aa21.51■■□□□ 1.03
LRRC28-202ENST00000331450 SULT6B1Q6IMI4 303 aa21.5■■□□□ 1.03
LRRC28-202ENST00000331450 NUDCQ9Y266 331 aa21.5■■□□□ 1.03
LRRC28-202ENST00000331450 U2SURPO15042 1029 aaKnown RBP21.49■■□□□ 1.03
LRRC28-202ENST00000331450 VIRMAQ69YN4 1812 aaKnown RBP21.48■■□□□ 1.03
LRRC28-202ENST00000331450 RAPGEF4Q8WZA2 1011 aa21.48■■□□□ 1.03
LRRC28-202ENST00000331450 SBF2Q86WG5 1849 aa21.48■■□□□ 1.03
LRRC28-202ENST00000331450 HMOX1P09601 288 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms