RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 PTPRMP28827 1452 aa13.98□□□□□ -0.17
GINS3-202ENST00000328514 ABCA9Q8IUA7 1624 aa13.98□□□□□ -0.17
GINS3-202ENST00000328514 NUCB2P80303 420 aa13.98□□□□□ -0.17
GINS3-202ENST00000328514 DDX49Q9Y6V7 483 aaKnown RBP13.98□□□□□ -0.17
GINS3-202ENST00000328514 EVC2Q86UK5 1308 aa13.97□□□□□ -0.17
GINS3-202ENST00000328514 KIF3BO15066 747 aa13.97□□□□□ -0.17
GINS3-202ENST00000328514 ZBTB7BO15156 539 aaPredicted RBP13.97□□□□□ -0.17
GINS3-202ENST00000328514 MCM5P33992 734 aa13.97□□□□□ -0.17
GINS3-202ENST00000328514 RIPK4P57078 832 aa13.97□□□□□ -0.17
GINS3-202ENST00000328514 TRAK1Q9UPV9 953 aa13.97□□□□□ -0.17
GINS3-202ENST00000328514 PTCH1Q13635 1447 aa13.97□□□□□ -0.17
GINS3-202ENST00000328514 CDC42BPGQ6DT37 1551 aa13.97□□□□□ -0.17
GINS3-202ENST00000328514 RABEP1Q15276 862 aa13.96□□□□□ -0.17
GINS3-202ENST00000328514 PNPLA6Q8IY17 1366 aa13.96□□□□□ -0.17
GINS3-202ENST00000328514 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
GINS3-202ENST00000328514 CDC45O75419 566 aa13.95□□□□□ -0.18
GINS3-202ENST00000328514 ARHGEF28Q8N1W1 1705 aaKnown RBP13.95□□□□□ -0.18
GINS3-202ENST00000328514 CWC22Q9HCG8 908 aaKnown RBP13.94□□□□□ -0.18
GINS3-202ENST00000328514 LMBRD1Q9NUN5 540 aa13.94□□□□□ -0.18
GINS3-202ENST00000328514 ZSCAN23Q3MJ62 389 aa13.94□□□□□ -0.18
GINS3-202ENST00000328514 ANKRD45Q5TZF3 282 aa13.94□□□□□ -0.18
GINS3-202ENST00000328514 MTERF4Q7Z6M4 381 aaKnown RBP13.94□□□□□ -0.18
GINS3-202ENST00000328514 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
GINS3-202ENST00000328514 YEATS2Q9ULM3 1422 aa13.93□□□□□ -0.18
GINS3-202ENST00000328514 KIF24Q5T7B8 1368 aa13.92□□□□□ -0.18
GINS3-202ENST00000328514 CSPP1Q1MSJ5 1256 aa13.92□□□□□ -0.18
GINS3-202ENST00000328514 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.92□□□□□ -0.18
GINS3-202ENST00000328514 ABCC4O15439 1325 aa13.91□□□□□ -0.18
GINS3-202ENST00000328514 SIRT2Q8IXJ6 389 aa13.91□□□□□ -0.18
GINS3-202ENST00000328514 ZKSCAN5Q9Y2L8 839 aa13.91□□□□□ -0.18
GINS3-202ENST00000328514 A0A1W2PP64 1363 aa13.9□□□□□ -0.18
GINS3-202ENST00000328514 HSPA2P54652 639 aa13.9□□□□□ -0.18
GINS3-202ENST00000328514 ZFYVE9O95405 1425 aa13.9□□□□□ -0.18
GINS3-202ENST00000328514 U2SURPO15042 1029 aaKnown RBP13.9□□□□□ -0.18
GINS3-202ENST00000328514 FCHSD2O94868 740 aa13.9□□□□□ -0.18
GINS3-202ENST00000328514 MRPL50Q8N5N7 158 aaKnown RBP13.9□□□□□ -0.18
GINS3-202ENST00000328514 RBSNQ9H1K0 784 aa13.9□□□□□ -0.18
GINS3-202ENST00000328514 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
GINS3-202ENST00000328514 ADAMTSL3P82987 1691 aa13.89□□□□□ -0.19
GINS3-202ENST00000328514 DYNC1I1O14576 645 aa13.89□□□□□ -0.19
GINS3-202ENST00000328514 NPATQ14207 1427 aa13.89□□□□□ -0.19
GINS3-202ENST00000328514 GSPT1P15170 499 aaKnown RBP13.88□□□□□ -0.19
GINS3-202ENST00000328514 MCTP1Q6DN14 999 aa13.88□□□□□ -0.19
GINS3-202ENST00000328514 CAVIN1Q6NZI2 390 aaKnown RBP13.88□□□□□ -0.19
GINS3-202ENST00000328514 USP26Q9BXU7 913 aa13.88□□□□□ -0.19
GINS3-202ENST00000328514 FAM135BQ49AJ0 1406 aa13.88□□□□□ -0.19
GINS3-202ENST00000328514 KIDINS220Q9ULH0 1771 aa13.88□□□□□ -0.19
GINS3-202ENST00000328514 VAMP4O75379 141 aa13.88□□□□□ -0.19
GINS3-202ENST00000328514 TMEM132EQ6IEE7 984 aa13.88□□□□□ -0.19
GINS3-202ENST00000328514 PRDM4Q9UKN5 801 aa13.88□□□□□ -0.19
GINS3-202ENST00000328514 PIK3C2BO00750 1634 aa13.88□□□□□ -0.19
GINS3-202ENST00000328514 DIAPH1O60610 1272 aaKnown RBP13.87□□□□□ -0.19
GINS3-202ENST00000328514 PRIM1P49642 420 aaKnown RBP13.87□□□□□ -0.19
GINS3-202ENST00000328514 PLEKHM2Q8IWE5 1019 aa13.87□□□□□ -0.19
GINS3-202ENST00000328514 LRRC7Q96NW7 1537 aa13.87□□□□□ -0.19
GINS3-202ENST00000328514 LRSAM1Q6UWE0 723 aa13.86□□□□□ -0.19
GINS3-202ENST00000328514 DCTPP1Q9H773 170 aa13.86□□□□□ -0.19
GINS3-202ENST00000328514 R3HCC1Q9Y3T6 440 aaKnown RBP13.86□□□□□ -0.19
GINS3-202ENST00000328514 ATAD2Q6PL18 1390 aa13.86□□□□□ -0.19
GINS3-202ENST00000328514 CLTCQ00610 1675 aaKnown RBP13.86□□□□□ -0.19
GINS3-202ENST00000328514 FYB1O15117 783 aa13.86□□□□□ -0.19
GINS3-202ENST00000328514 TTC22Q5TAA0 569 aa13.86□□□□□ -0.19
GINS3-202ENST00000328514 GPT2Q8TD30 523 aa13.86□□□□□ -0.19
GINS3-202ENST00000328514 CCDC39Q9UFE4 941 aa13.86□□□□□ -0.19
GINS3-202ENST00000328514 CD163L1Q9NR16 1453 aa13.86□□□□□ -0.19
GINS3-202ENST00000328514 CAMSAP1Q5T5Y3 1602 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 NEXMIFQ5QGS0 1516 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 UQCRHLA0A096LP55 91 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 UQCRHP07919 91 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 ZNF853P0CG23 659 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 INTS3Q68E01 1043 aaKnown RBP13.84□□□□□ -0.19
GINS3-202ENST00000328514 SASS6Q6UVJ0 657 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 SMAP1Q8IYB5 467 aaPredicted RBP13.84□□□□□ -0.19
GINS3-202ENST00000328514 IFT57Q9NWB7 429 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 AK9Q5TCS8 1911 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 FRMPD1Q5SYB0 1578 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 ABCC3O15438 1527 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 ST18O60284 1047 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 MBD3O95983 291 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
GINS3-202ENST00000328514 CABP2Q9NPB3 220 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 TERF2IPQ9NYB0 399 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 ZDHHC9Q9Y397 364 aa13.84□□□□□ -0.19
GINS3-202ENST00000328514 VGFO15240 615 aaPredicted RBP13.83□□□□□ -0.2
GINS3-202ENST00000328514 GGNBP2Q9H3C7 697 aa13.83□□□□□ -0.2
GINS3-202ENST00000328514 KNDC1Q76NI1 1749 aa13.83□□□□□ -0.2
GINS3-202ENST00000328514 GNAI1P63096 354 aa13.82□□□□□ -0.2
GINS3-202ENST00000328514 RBM10P98175 930 aaKnown RBP13.82□□□□□ -0.2
GINS3-202ENST00000328514 XPCQ01831 940 aaPredicted RBP13.82□□□□□ -0.2
GINS3-202ENST00000328514 PKP1Q13835 747 aa13.82□□□□□ -0.2
GINS3-202ENST00000328514 C1orf115Q9H7X2 142 aa13.82□□□□□ -0.2
GINS3-202ENST00000328514 FAM13BQ9NYF5 915 aa13.82□□□□□ -0.2
GINS3-202ENST00000328514 PRPF40AO75400 957 aaKnown RBP13.82□□□□□ -0.2
GINS3-202ENST00000328514 NFE2L2Q16236 605 aa13.82□□□□□ -0.2
GINS3-202ENST00000328514 TMEM63CQ9P1W3 806 aa13.82□□□□□ -0.2
GINS3-202ENST00000328514 NCLP19338 710 aaKnown RBP13.81□□□□□ -0.2
GINS3-202ENST00000328514 CHGAP10645 457 aaKnown RBP13.8□□□□□ -0.2
GINS3-202ENST00000328514 KIF20BQ96Q89 1820 aa13.8□□□□□ -0.2
GINS3-202ENST00000328514 CASC1Q6TDU7 716 aa13.8□□□□□ -0.2
GINS3-202ENST00000328514 ATP10DQ9P241 1426 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms