RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 NGLY1Q96IV0 654 aa9.26□□□□□ -0.93
CLRN1-202ENST00000327047 PDZRN3Q9UPQ7 1066 aa9.26□□□□□ -0.93
CLRN1-202ENST00000327047 ADGRB3O60242 1522 aa9.26□□□□□ -0.93
CLRN1-202ENST00000327047 IFT172Q9UG01 1749 aa9.26□□□□□ -0.93
CLRN1-202ENST00000327047 GAS2L3Q86XJ1 694 aa9.26□□□□□ -0.93
CLRN1-202ENST00000327047 THEMISQ8N1K5 641 aaPredicted RBP9.26□□□□□ -0.93
CLRN1-202ENST00000327047 TNRQ92752 1358 aa9.25□□□□□ -0.93
CLRN1-202ENST00000327047 DDX11L8A8MPP1 907 aa9.25□□□□□ -0.93
CLRN1-202ENST00000327047 E9PSI1 815 aa9.25□□□□□ -0.93
CLRN1-202ENST00000327047 C1QTNF8P60827 252 aa9.25□□□□□ -0.93
CLRN1-202ENST00000327047 PDE3AQ14432 1141 aa9.25□□□□□ -0.93
CLRN1-202ENST00000327047 CENPJQ9HC77 1338 aaPredicted RBP9.25□□□□□ -0.93
CLRN1-202ENST00000327047 C22orf23Q9BZE7 217 aa9.24□□□□□ -0.93
CLRN1-202ENST00000327047 PCDHB15Q9Y5E8 787 aa9.24□□□□□ -0.93
CLRN1-202ENST00000327047 NUTM2BA6NNL0 878 aaPredicted RBP9.24□□□□□ -0.93
CLRN1-202ENST00000327047 NUTM2EB1AL46 878 aaPredicted RBP9.24□□□□□ -0.93
CLRN1-202ENST00000327047 NUTM2DQ5VT03 806 aaPredicted RBP9.24□□□□□ -0.93
CLRN1-202ENST00000327047 NUTM2AQ8IVF1 878 aaPredicted RBP9.24□□□□□ -0.93
CLRN1-202ENST00000327047 KIF1BO60333 1816 aa9.23□□□□□ -0.93
CLRN1-202ENST00000327047 PMFBP1Q8TBY8 1022 aa9.23□□□□□ -0.93
CLRN1-202ENST00000327047 C14orf93Q9H972 538 aaKnown RBP9.23□□□□□ -0.93
CLRN1-202ENST00000327047 TNNQ9UQP3 1299 aa9.23□□□□□ -0.93
CLRN1-202ENST00000327047 DCAF8L1A6NGE4 600 aa9.23□□□□□ -0.93
CLRN1-202ENST00000327047 ERVK-7P63135 1459 aa9.23□□□□□ -0.93
CLRN1-202ENST00000327047 HOXD11P31277 338 aaPredicted RBP9.22□□□□□ -0.93
CLRN1-202ENST00000327047 CALD1Q05682 793 aaKnown RBP9.22□□□□□ -0.93
CLRN1-202ENST00000327047 HSCBQ8IWL3 235 aa9.22□□□□□ -0.93
CLRN1-202ENST00000327047 ARHGAP31Q2M1Z3 1444 aa9.22□□□□□ -0.93
CLRN1-202ENST00000327047 PIK3C2GO75747 1445 aa9.22□□□□□ -0.93
CLRN1-202ENST00000327047 BCL2L13Q9BXK5 485 aa9.22□□□□□ -0.93
CLRN1-202ENST00000327047 FAM13BQ9NYF5 915 aa9.22□□□□□ -0.93
CLRN1-202ENST00000327047 PRDM4Q9UKN5 801 aa9.22□□□□□ -0.93
CLRN1-202ENST00000327047 ISY1Q9ULR0 285 aaKnown RBP9.22□□□□□ -0.93
CLRN1-202ENST00000327047 ADGRB1O14514 1584 aa9.21□□□□□ -0.93
CLRN1-202ENST00000327047 A0A0U1RQG5 324 aaPredicted RBP9.21□□□□□ -0.93
CLRN1-202ENST00000327047 RLBP1P12271 317 aa9.21□□□□□ -0.93
CLRN1-202ENST00000327047 TNPO1Q92973 898 aaKnown RBP9.21□□□□□ -0.93
CLRN1-202ENST00000327047 AFF2P51816 1311 aa9.21□□□□□ -0.93
CLRN1-202ENST00000327047 CHD4Q14839 1912 aa9.21□□□□□ -0.94
CLRN1-202ENST00000327047 CFAP65Q6ZU64 1925 aaKnown RBP9.21□□□□□ -0.94
CLRN1-202ENST00000327047 ZNF692Q9BU19 519 aaPredicted RBP9.21□□□□□ -0.94
CLRN1-202ENST00000327047 MYOM1P52179 1685 aa9.21□□□□□ -0.94
CLRN1-202ENST00000327047 RPGRIP1LQ68CZ1 1315 aa9.21□□□□□ -0.94
CLRN1-202ENST00000327047 PIK3C2BO00750 1634 aa9.2□□□□□ -0.94
CLRN1-202ENST00000327047 CARD14Q9BXL6 1004 aa9.2□□□□□ -0.94
CLRN1-202ENST00000327047 SBNO2Q9Y2G9 1366 aa9.2□□□□□ -0.94
CLRN1-202ENST00000327047 NCOA3Q9Y6Q9 1424 aa9.2□□□□□ -0.94
CLRN1-202ENST00000327047 PPLO60437 1756 aa9.2□□□□□ -0.94
CLRN1-202ENST00000327047 GTPBP6O43824 516 aaPredicted RBP9.2□□□□□ -0.94
CLRN1-202ENST00000327047 MSNP26038 577 aaKnown RBP9.2□□□□□ -0.94
CLRN1-202ENST00000327047 RIPK4P57078 832 aa9.2□□□□□ -0.94
CLRN1-202ENST00000327047 IDI1Q13907 227 aa9.2□□□□□ -0.94
CLRN1-202ENST00000327047 CDCA8Q53HL2 280 aa9.2□□□□□ -0.94
CLRN1-202ENST00000327047 NPC1L1Q9UHC9 1359 aa9.19□□□□□ -0.94
CLRN1-202ENST00000327047 ZSCAN30Q86W11 494 aa9.19□□□□□ -0.94
CLRN1-202ENST00000327047 RWDD1Q9H446 243 aaPredicted RBP9.19□□□□□ -0.94
CLRN1-202ENST00000327047 SLIT1O75093 1534 aa9.19□□□□□ -0.94
CLRN1-202ENST00000327047 ZBTB7CA1YPR0 619 aa9.19□□□□□ -0.94
CLRN1-202ENST00000327047 NASPP49321 788 aaPredicted RBP9.19□□□□□ -0.94
CLRN1-202ENST00000327047 CCDC173Q0VFZ6 552 aa9.19□□□□□ -0.94
CLRN1-202ENST00000327047 TMEM132EQ6IEE7 984 aa9.19□□□□□ -0.94
CLRN1-202ENST00000327047 R3HCC1Q9Y3T6 440 aaKnown RBP9.19□□□□□ -0.94
CLRN1-202ENST00000327047 NINLQ9Y2I6 1382 aa9.18□□□□□ -0.94
CLRN1-202ENST00000327047 APBB1O00213 710 aa9.18□□□□□ -0.94
CLRN1-202ENST00000327047 OFD1O75665 1012 aa9.18□□□□□ -0.94
CLRN1-202ENST00000327047 WWC1Q8IX03 1113 aa9.18□□□□□ -0.94
CLRN1-202ENST00000327047 GBP4Q96PP9 640 aa9.18□□□□□ -0.94
CLRN1-202ENST00000327047 RRP7AQ9Y3A4 280 aaKnown RBP9.18□□□□□ -0.94
CLRN1-202ENST00000327047 RARSP54136 660 aaKnown RBP9.17□□□□□ -0.94
CLRN1-202ENST00000327047 ANP32BQ92688 251 aaKnown RBP9.17□□□□□ -0.94
CLRN1-202ENST00000327047 RNF25Q96BH1 459 aaPredicted RBP9.17□□□□□ -0.94
CLRN1-202ENST00000327047 ASXL1Q8IXJ9 1541 aa9.17□□□□□ -0.94
CLRN1-202ENST00000327047 UBR1Q8IWV7 1749 aa9.17□□□□□ -0.94
CLRN1-202ENST00000327047 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.17□□□□□ -0.94
CLRN1-202ENST00000327047 NEXMIFQ5QGS0 1516 aa9.17□□□□□ -0.94
CLRN1-202ENST00000327047 HSP90AB1P08238 724 aaKnown RBP9.17□□□□□ -0.94
CLRN1-202ENST00000327047 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.17□□□□□ -0.94
CLRN1-202ENST00000327047 ZC3H15Q8WU90 426 aaKnown RBP9.17□□□□□ -0.94
CLRN1-202ENST00000327047 PDIA4P13667 645 aaKnown RBP9.16□□□□□ -0.94
CLRN1-202ENST00000327047 DDIT3P35638 169 aa9.16□□□□□ -0.94
CLRN1-202ENST00000327047 CACNB1Q02641 598 aaPredicted RBP9.16□□□□□ -0.94
CLRN1-202ENST00000327047 KCNV2Q8TDN2 545 aa9.16□□□□□ -0.94
CLRN1-202ENST00000327047 GPBP1L1Q9HC44 474 aaPredicted RBP9.16□□□□□ -0.94
CLRN1-202ENST00000327047 TRAK1Q9UPV9 953 aa9.16□□□□□ -0.94
CLRN1-202ENST00000327047 SKOR2Q2VWA4 1001 aaPredicted RBP9.16□□□□□ -0.94
CLRN1-202ENST00000327047 ZFYVE9O95405 1425 aa9.16□□□□□ -0.94
CLRN1-202ENST00000327047 RAB3GAP1Q15042 981 aa9.15□□□□□ -0.94
CLRN1-202ENST00000327047 FBXO31Q5XUX0 539 aaPredicted RBP9.15□□□□□ -0.94
CLRN1-202ENST00000327047 PPP1R9BQ96SB3 815 aa9.15□□□□□ -0.94
CLRN1-202ENST00000327047 SLC52A1Q9NWF4 448 aa9.15□□□□□ -0.94
CLRN1-202ENST00000327047 ATRNO75882 1429 aa9.15□□□□□ -0.94
CLRN1-202ENST00000327047 MSH6P52701 1360 aa9.15□□□□□ -0.94
CLRN1-202ENST00000327047 QTRT2Q9H974 415 aaKnown RBP9.15□□□□□ -0.95
CLRN1-202ENST00000327047 UQCRHLA0A096LP55 91 aa9.14□□□□□ -0.95
CLRN1-202ENST00000327047 VGFO15240 615 aaPredicted RBP9.14□□□□□ -0.95
CLRN1-202ENST00000327047 UQCRHP07919 91 aa9.14□□□□□ -0.95
CLRN1-202ENST00000327047 XPCQ01831 940 aaPredicted RBP9.14□□□□□ -0.95
CLRN1-202ENST00000327047 PRDM10Q9NQV6 1147 aa9.14□□□□□ -0.95
CLRN1-202ENST00000327047 ZNF219Q9P2Y4 722 aaPredicted RBP9.14□□□□□ -0.95
CLRN1-202ENST00000327047 TMEM94Q12767 1356 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms